ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MAMDC2
WDR74
STX5
MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
SNX16
LOC102724770
DGCR6
KIF5C
ADAMTSL1
SPATC1L
CABCOCO1
TNFRSF19
MTRNR2L8
COL23A1
SP2
FRG2C
FAP
FRG2
EMCN
NAV3
H4C14
H3C15
H3C14
H4C15
H2AC19
H2AC18
CLPB
MUC3A
DPH6
KATNB1
DDX23
EAPP
BOD1
SLC8A1
EVI5L
H4C12
H4C11
H2BC14
H2AC14
VPS50
HEPACAM2
UNK
H3-3B
TMEM242
DNM2
TMEM115
NPRL2
CYB561D2
H4C3
H1-6
CCDC200
CHMP4B
CDCA3
TCEA2
DDX49
COPE
NAA80
IFRD2
HYAL3
RWDD1
SP1
EHF
TBL1X
PHF12
FBXL19
H2BC4
H2AC6
THRAP3
FEM1A
POLR3F
DZANK1
MAPKAPK5
ARHGAP35
AP2S1
PHRF1
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
ARL4D
WDPCP
MDH1
TSN
ARID5B
IRF2BP2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PAFAH2
GALM
CIC
IL32
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
TSNAXIP1
RANBP10
OR4M1
PRCC
ST3GAL2
SLC25A41
KHSRP
RBBP5
PHB
SUCLG1
YJU2
RPS20
MRPL24
HDGF
BANP
ID3
NEBL
ARID2
TEPSIN
NDUFAF8
PEX14
DFFA
RFX1
CCDC90B
FAM168A
SMPD3
TSC2
NTHL1
RAG2
IFTAP
PPRC1
CALR3
C19orf44
LRRC29
NUDCD1
S1PR4
NCLN
TOM1L2
DRC3
TESK2
MMACHC
PAK1IP1
C6orf52
RAB5B
PMEL
CDK2
UCKL1
UBE2T
PPP1R12B
ANKHD1-EIF4EBP3
ANKHD1
GSPT1
ZFYVE1
ORMDL3
GSDMB
OR4Q3
HNRNPC
SPSB3
NUBP2
MRPS34
EME2
LRCH4
FBXO24
GATB
INVS
ERP44
PES1
PRR5L
COMMD9
SLC25A25
NAIF1
VIPAS39
AHSA1
NDC80
METTL4
ART1
MTOR
NPIPA1
PEMT
TAF12
RPS3
ZNF17
CCDC146
COX16
PIGL
NCOR1
ING4
ZNF417
PANK4
HES5
BMF
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
MALL
H2BC15
H2AC15
SPAAR
HRCT1
ID1
PRR14
FBRS
TMEM11
PIN4
SP5
SRSF11
LRRC40
UNKL
C16orf91
PNKD
GPBAR1
AAMP
BMP5
RXFP4
KHDC4
OST4
KHK
EMILIN1
INTS1
TP53I3
SF3B6
FAM228B
BUB1B
ZNF608
STIP1
NUP107
WT1
OSBP
ZNF268
GPR137
DOK3
DDX41
MED27
GUF1
NOP16
HIGD2A
PARP16
GSK3A
ERF
RARB
ZNF547
TRAPPC2B
GBA
TARS2
INTS9
HMBOX1
TACO1
TMEM262
TTI2
DYNC1I2
TULP2
NUCB1
MTRF1
LARS1
TFPT
PRPF31
TBL1XR1
TMEM70
ELOC
CNIH4
ZFPL1
CDCA5
SCAF1
RRAS
ZNF513
SNX17
EIF2B4
NOC4L
DDX51
RCAN1
LY6L
RPS7
SF3A3
KIAA0895L
EXOC3L1
ELMO3
E2F4
RABL2A
VARS2
GTF2H4
RANBP2
ZNF211
PNPLA6
RPL32
SYMPK
FOXA3
ZNF687
CYCS
MRI1
C19orf53
NUDT13
TM4SF18
SLC39A1
CRTC2
CREB3L4
TINF2
NEDD8-MDP1
NEDD8
GMPR2
ZCCHC4
ZNF165
OR1F12
SNAP25
UBQLN4
RAB25
LAMTOR2
TSSC4
STAM
PHB2
TBP
SSBP3
PSMB1
TMTC3
CEP290
KBTBD6
ZSWIM3
ACOT8
COX7C
CCNL1
FCF1
AREL1
H3C4
H4C5
H2BC7
H2AC7
TIMM21
FBXO15
KIF2C
EMC4
STK25
ABT1
NUP205
METTL3
ATG4C
MRPL11
COMMD1
CCT4
TBL3
RPS2
RNF151
NOXO1
ZNF337
VMO1
PSMB6
GLTPD2
CAND1
NDUFAF5
ESF1
DMAC1
ZNF628
NAT14
TNFRSF12A
THOC6
HCFC1R1
CLDN6
HMX2
BUB3
ZNF225
WDR46
RGL2
PFDN6
SEC11C
SMG8
MRPL30
MITD1
ZCCHC8
NDUFS3
KBTBD4
FAM180B
NUF2
RPL36
MICOS13
HSD11B1L
OLFML2A
NR6A1
TCERG1
RPS6KB2
PTPRCAP
NFKBIL1
DDX39B
ATP6V1G2
MRPL53
MOGS
MRPL28
ARL4C
TMEM107
OAZ3
TRIP10
GPR108
SSBP2
SHPK
CTNS
ZC3H12A
NDUFB5
MRPL47
SLC35E2B
PROSER3
LIN37
HSPB6
MEIS1
NFIB
SPHK2
RPL18
FAM83E
PSENEN
IGFLR1
GTF3C3
C2orf66
KRT19
KRT15
RHOT2
RHBDL1
GSTO2
SMARCAL1
TOR1AIP2
TOR1AIP1
ANAPC5
PSMD11
VWA5A
ZFYVE19
DNAJC17
HEMK1
C3orf18
ZNF585B
ZNF383
ZMYND10
BAZ2A
ATP5F1B
C12orf43
ATP5MG
OR4N2
ZSCAN22
HDAC9
UBAC1
RPL14
SIRT4
AK2
SUFU
ACTR1A
GOSR2
ZMAT2
HARS2
HARS1
VRK1
TRDMT1
ZNF140
KRT39
TATDN3
NSL1
CTU1
PPP1R12C
UFD1
CDC45
PSMC5
FTSJ3
POLDIP3
PRRG2
NOSIP
UBR2
WNK4
VPS25
TMEM94
STT3A
BCL2L1
THAP11
NLK
PSPN
ALKBH7
SEL1L
HMOX1
CCDC174
SMARCD2
SLX4IP
MKKS
ATP6V1G1
FARSB
AHCYL2
PTPRH
PEX3
DBP
CA11
ADAT2
SSR3
SIRT2
NFKBIB
UFSP2
C4orf47
ZNF444
CDK5RAP2
RPL37
CARD6
ZNF286A
KCTD5
MRPS7
MIF4GD
GGA3
C1orf159
VCPIP1
C8orf44-SGK3
TXNDC2
PTDSS2
ANO9
LSG1
CRADD
FAM187A
EFTUD2
CCDC103
TIMMDC1
NMT1
DCAKD
BCL3
SEC13
FASTKD1
HEXIM2
SUGP1
MAU2
G3BP1
TMEM60
PHTF2
CLN3
APOBR
TRAPPC3
MAP7D1
HEXA
ZNF691
KRT23
ZNF773
CD79A
ARHGEF1
TLE3
ZNF548
RGS14
LMAN2
SPDYE7P
POM121
AURKAIP1
CCAR2
C8orf58
HEXB
SHC1
FLAD1
CKS1B
BAHCC1
EXD2
CD2BP2
MT2A
TSNAX
EMP3
ZC3H10
RPL41
UBC
ZNF500
PDE6D
COPS7B
RPIA
NME1
ZNF776
COX7A2L
ZNF48
TBC1D10B
MYLPF
SMAD3
BABAM1
COPS7A
VEZT
FGD6
DLGAP1
SAMD1
MISP3
C19orf67
RPL18A
ZNF420
ZNF143
SART3
ISCU
LMNB2
FBXW11
SUPT7L
SLC4A1AP
TRAF7
RAB26
RBM25
ZNF335
KRR1
SNX15
SUPV3L1
WFIKKN1
METTL26
MCRIP2
SNX1
CIAO2A
ZNF226
LTN1
TXNRD1
CACTIN
H4C8
PITX3
GBF1
SLC35B1
MRPL20
CCNL2
EIF3F
PWWP2A
TMEM63C
SCRIB
EXOC4
NBPF15
RNF121
LOC100133315
DYNC2I2
CTDP1
TARBP1
PEX2
ZNF688
EXOSC6
EIF2AK3
ZNF235
TXNL4B
DHX38
MRPL21
IGHMBP2
SECISBP2
METTL25
CKS2
CCDC59
ZBTB45
SLC27A5
SCYL3
PABPN1
THYN1
ACAD8
SRD5A1
NSUN2
NTMT1
C9orf50
UTP3
RPGRIP1L
FTO
CCDC124
GRAMD2B
SULT2B1
DHX8
EXOSC5
BCKDHA
RGPD2
RGPD1
TXNDC5
ADAMTS9
MTRNR2L9
FRMPD4
RNASEH2A
PRDX2
VTI1B
TIPARP
ZBTB38
PTPN6
DSTYK
ARHGEF9
REXO1
ISY1-RAB43
ISY1
RAB11B
SSBP1
C19orf48
HNRNPL
GDE1
CCP110
NPAS4
MTRNR2L10
NDUFS7
EMILIN2
SYP
PRICKLE3
ING3
SEC61B
UBE2I
ZNF576
IRGQ
PCM1
IPO13
RPS27A
CLHC1
POLR2E
GPX4
ANKRD28
USP17L22
USP17L21
USP17L20
USP17L12
HNRNPUL1
PDE4DIP
CAPN15
SLC25A20
RPL9
RBL1
LIAS
STK36
RNF25
PHF19
FNDC3A
TRMO
TRIP4
PCLAF
PPP6R1
PPP5D1
CALM3
PLA2G4A
RGS19
OPRL1
LKAAEAR1
C5orf38
TMEM160
AP2M1
TOP2A
FBH1
EPS15
STAM2
IARS2
BPNT1
TRAPPC6B
PNN
CCL3
SYT7
SLC39A9
PCBP1
ERH
SRCIN1
RPAIN
PRORP
PPP2R3C
NUP88
CENPA
ZAR1
INO80C
GET3
SLC25A19
NDUFB3
FAM126B
SH3RF2
H4C4
H2BC6
USP30
HEATR5B
GPATCH11
JOSD2
CSDE1
ASPDH
WDR97
MAF1
CYC1
UVRAG
USP22
TMEM109
PRPF19
BRWD1
SESN1
CEP57L1
AP1G1
USP48
ANGPTL2
TM9SF4
RPL35A
IQCG
RABAC1
GLIPR1L1
CAPS2
RPL27
IFI35
TRAPPC9
PTEN
KLLN
PLA2G15
INTS10
MATR3
UBE2J1
PNISR
MRPS23
SF3B3
COG4
GTF2I
SNAPC1
MYOM2
GABPB2
XAB2
STXBP2
PCP2
BMERB1
PMF1-BGLAP
PMF1
GORAB
ARHGAP17
TJP3
NR1H3
HSPA9
ACP2
FCRL5
SREK1IP1
CWC27
ZSCAN5A
SIX1
TBC1D17
PNKP
AKT1S1
COMMD2
CDCA8
C1orf109
ARHGEF2
NVL
RAD52
IER3
FLOT1
UTP11
FHL3
ENPP4
CLIC5
CCDC138
LTA4H
KLHL29
ASAH2
STAT1
IRAG1
TOMM40L
DENND1B
APOA2
ALKBH3
B4GALT3
KLF2
RMDN2
TRIM55
ATP2C1
STX16
TPRKB
XPNPEP3
ST13
KLF6
FUT10
DNAJB7
THRA
CCDC110
TEKT2
ADPRS
ZBTB5
MRPS18C
HELQ
RAP2B
HBP1
TXNDC11
C1orf198
NGB
GCLC
LNPEP
MDM2
IFNGR2
TSPO
MCAT
CHPF2
ATF4
ABCF2-H2BE1
ABCF2
ADO
SCT
DRD4
CDHR5
ACTL6A
ZNF56
RUFY3
RTRAF
RTF2
PEX26
ESYT1
GUCY2D
PEAK1
HMG20A
FAM177B
CXCR5
CCL5
CCDC39
TOM1
TMEM256
PLSCR3
NLGN2
TTC33
TGIF1
CYTH3
MDM4
SMCO1
ZPBP2
IKZF3
NLRP3
NCOA7
MNT
KAT6B
AIM2
SNRPB
VPS52
RPS18
NPR1
ILF2
IL17A
B3GALT4
NUP153
RASAL2
NDUFC2-KCTD14
NDUFC2
NAT16
HCAR3
CHST12
RIIAD1
MAP2K3
KDM6B
IRF2BPL
CELF3
HDAC7
ANP32C
KMT2C
GLDN
EML2
DPP9
CRYBB1
BTRC
POLG
PARP2
LAMP1
CCNB1IP1
FGG
CRYAA
CRYAA2
RGS8
MUC20
MACC1
DHX33
ZNF384
SKA2
PRR11
PHC2
KANSL3
ID2
FER1L5
TJP1
MRPL1
MAPK11
DCP1B
COG3
UBE2H
DRAP1
DAGLB
C11orf68
RNF213
PXMP2
POLE
LOC102723996
ICOSLG
USP3
SUPT4H1
MNX1
ZNF639
COPS8
CCM2
CBWD5
TUBG1
RPS13
RETREG3
LAS1L
HSD11B1
ELOVL1
CDYL
CDC20
BDH1
PSMD4
OR6B2
NDUFA10
CBWD6
CBWD3
SLC2A4RG
MED23
LIME1
PAX5
WHAMM
FSD2
TRIM48
STMN3
RTEL1
FMO4
CWC25
TP63
TMEM79
SMG5
RBM42