ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15039985 | T-47D
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◣ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L1
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MTRNR2L9
MAMDC2
ZFP36L1
TIPARP
ZNF335
VPS37D
RGPD2
RGPD1
NLRX1
UEVLD
CCDC200
SORBS1
TP53I11
SNX16
SLC29A3
C1orf198
UBFD1
EARS2
GTF2H4
AHCY
TOR1A
OSCAR
NDUFA3
SWSAP1
SIRT5
WDR74
EIF3C
EIF3CL
SOGA1
AP2A2
ATG16L1
SETD1A
GADD45B
UBE2L3
MRPL39
RAPGEF1
ARPC3
NCAM2
UBE2V2
SPATC1L
CLPB
ZDHHC12
ZCCHC14
DUX4
DTD1
TOP1
RAC1
DCDC2
KAAG1
KXD1
TCTN3
CABLES2
RNF24
PRRT3
CACTIN
TMC6
TFAM
SPATA2
MYNN
ACTRT3
RIOX1
TERF2
NSFL1C
PIGBOS1
PIGB
MLLT1
SLC25A20
CSF3R
CHST12
MRPL45
PIH1D1
ALDH16A1
DNAAF3
PRR5L
COMMD9
EI24
KIF16B
RPS29
HPS1
ILDR1
MKNK2
MTHFSD
HPS6
PRMT5
ILF2
CYRIB
C1QTNF8
SGSM1
KANK2
SRCIN1
CERCAM
DRG2
HOOK1
UBOX5
FASTKD5
NEMF
CORO1C
FAM161B
COQ6
LTA4H
TCIRG1
ZDHHC24
ACTN3
FXN
CEP164
GPR160
FBXO43
UBXN4
ADRM1
CNOT3
KCNK5
BRAP
ACAD10
RBM4B
GSTA4
TMEM41A
RFX1
CLK3
MICALL2
TJP3
RPL6
SMCO4
GRK6
CKM
METTL14
FAM193B
GPCPD1
MELTF
RBBP8NL
SPOCD1
RPL13
PMF1-BGLAP
PMF1
RAB2A
ZER1
SMARCD2
SLC25A16
EFR3A
UIMC1
NUCKS1
TNS4
TAF1C
ADAD2
PSMA3
NUDT14
TP63
PDCL
NCOA7
LARP1
ADSS1
ZNF131
WDR25
WARS1
PSMD9
HPD
ZBTB3
SRXN1
KIAA0895
ANLN
MLEC
ZFAND4
BNIP5
SLC27A4
YEATS2
PRR5-ARHGAP8
PRR5
MOK
PRMT1
ENSA
GADD45GIP1
UTP6
COASY
TRMT1
NACC1
RS1
PPEF1
C1QTNF5
DYM
DDHD2
TDRD7
SYT11
GON4L
CLTB
RAB5C
NEDD1
TMEM19
GALNT10
FBXO31
ITGA3
TMEM229B
GTF2H5
ZNF234
YAF2
SEC22B
RNF216
ARNT
STK4
PRRC2B
USP35
KCTD21
RASGRP1
GSC
NEK6
TTC38
PKDREJ
STRN3
AP4S1
ATP2C2
POLG
PDK2
SLC9A8
FRG2C
CASTOR1
RABGEF1
RAB4B
MIA
PHLDA2
GOLGA7B
POFUT1
PLAGL2
ACTL6A
ATG9B
ABCB8
LDLRAP1
PUS7L
IRAK4
RAB3IL1
FRG2
CCNT1
KDSR
GEMIN6
CBX1
PLXDC1
PPID
COPS4
GNG7
KLF8
LSM5
AVL9
MEX3C
METAP2
TTYH3
ISOC2
PDLIM1
DPP9
BSND
EP400
DHRS13
SPAG4
NCOA6
COX5A
C12orf43
ARHGEF1
ARHGAP39
IFNGR2
AHSG
INF2
RPS10-NUDT3
RPS10
BCAR3
OAS2
DIO1
ATP5MC1
ATP6V0E1
SNRNP35
ICMT
SAMD8
DUSP13
MEGF9
LFNG
RNF114
LRRC37A3
CDT1
SPATS2
CRLF3
RPS12
FEM1A
PDRG1
TKT
SMG8
ERCC1
GPSM2
GK5
LMAN1L
PC
LSM14B
ZFAND1
ZSWIM4
SSH1
WFDC3
DNTTIP1
TENT2
NELFCD
PRR30
PREB
HES7
ALOXE3
NDE1
MARF1
PNPLA6
ZNF343
LTO1
PDLIM7
RHOD
PGPEP1
SCN8A
CUTC
COX15
OAS3
TMEM44
ZSCAN1
ELAVL3
TBC1D31
FRMD4A
FBXW5
C8G
NOM1
RAD21L1
AARS2
RAB11B
SOS2
UBE2I
SLC35A5
ATG3
ZC3H14
PHLDB1
NDUFS7
MRPL35
IMMT
SLC35B1
PMEPA1
FBXL18
SLC29A2
C15orf48
AQP2
ERICH4
DMAC2
MRPS17
DDB2
RAB15
NEK7
AARSD1
HM13
RHOF
ARHGAP27
RNF168
CCDC22
CACNA1F
SREBF1
PPP1R9B
VCL
HSPA6
NDUFA12
EPS15
SCGB1C2
SCGB1C1
RPUSD2
CCDC32
C3orf33
ZNF629
FKBP9
TIA1
SRPK1
CLUAP1
C16orf90
TP53RK
SLC13A3
RRBP1
MIGA2
RFT1
DEFB116
CORO6
ALDH3B1
UNC93B1
KTN1
LZTS3
NUDT8
C16orf95
ECPAS
CBLC
COMMD2
NDUFA4L2
ZNF77
RPS14
PSMD4
TIMM22
PXMP4
NAE1
PPP6R3
JRK
RBM17
TMEM214
SUOX
TSPAN10
NPLOC4
TRABD
BRMS1L
SEMA6B
HUNK
KCNK15
TSACC
CCT3
SH3GLB2
SMN2
SMN1
NIPA1
NIPA2
CNN1
PITPNA
BANP
POLR3E
MOB3A
IZUMO4
ELL
STX16
FCHO1
WDR43
PTPRA
DHX16
POMK
TCTEX1D2
ZNF555
NR2F6
PYCR3
C19orf25
H6PD
SLC26A8
MAPK14
VARS1
BTBD6
BRF1
SYNJ2
BDH1
SLC25A45
FRMD8
GMFB
ABRAXAS2
NOL10
APC2
C5AR2
MORN4
GLI4
MAP11
ATMIN
SETX
GPAM
EEF2
STAT2
APOF
SKIL
HMGN4
B4GAT1
BRMS1
ZYX
FAM131B
TOMM20L
HRC
TMUB2
PIEZO1
CTR9
SHISAL2A
LY6G6F-LY6G6D
LY6G6F
ABHD16A
PMS2
AIMP2
ZNF276
VPS9D1
DOCK7
ADRA2A
OSGIN1
SNU13
ZNF500
ABT1
LPAR2
LIPH
ABCC5
WDR89
AVPI1
FOXK2
CDK5RAP1
NRROS
SLC35F2
SMU1
MRGBP
TIMM9
KIAA0586
VKORC1
ZNF713
FUT10
TMEM134
TMEM51
VAT1
RND2
TRIM16L
CCDC71L
ARFGAP2
HCFC2
GLT8D2
IQCE
POC5
ZNF860
OSBPL10
FNDC3B
CHAD
WNT4
MAX
MEGF8
SMARCC2
INKA2
PRXL2A
KHDRBS3
PCDH1
CYTH1
MARCHF8
UTP25
CIZ1
ZNF3
SNX3
CASKIN1
METTL26
MCRIP2
SLC25A39
PCYT1A
CUEDC2
SCAF11
KIF2C
RAB8A
NDUFAB1
IL1RAP
H4C8
AP3M2
TRIM16
AHNAK2
ESR2
PAK4
CPPED1
RBM12B
PYROXD2
CFAP157
CCDC107
ATP6V0E2
WNT7B
ESCO1
TMPRSS13
CCNY
USH1G
OTOP2
ACER1
MRPL54
APBA3
SARS2
MRPS12
MARS1
ARHGAP9
ZNF843
GASK1B
LAMP3
MMP28
TMEM62
CHMP6
COX16
MUC1
MAFA
EPN3
FOXN3
NR6A1
ATF6
SLC38A10
RPN2
MROH8
NTAN1
MRAS
MMP17
ZNF34
KANSL2
PRICKLE1
INSM1
SHFL
MLXIPL
MFAP4
GTF2IRD2
HELLS
MACROD1
FAM83G
DEF8
PSMB3
PCGF2
STARD3NL
TIMM17A
CCDC42
SUSD3
RRP12
SNX4
MVD
SLC30A6
ADAMTSL5
USP13
PTPN1
EIF5A2
ARAP1
SMNDC1
TMEM221
STAT5A
RFLNA
AURKAIP1
RTKN
ELK3
TRADD
HSF4
FBXL8
XXYLT1
CTSO
ST6GALNAC6
PRDM11
GFUS
KRTAP10-4
EMID1
ZNF517
TMEM160
KCNN1
KNL1
PPP5D1
CALM3
EBI3
TCP11L1
ZFP64
DRAM1
HPS3
METTL25
CCDC59
RND1
ZBTB34
IL12A
TRIM41
PPP2R2A
TRIM59
PSMD2
NFATC2
FBXW4
ZNF638
LMTK3
CBX4
HERC2
GPER1
HBS1L
BBS1
NMRAL1
HMOX2
SIVA1
RRP1B
HSF2BP
ZNF600
TBX1
MARVELD1
EMC4
RNF187
HAGHL
CCDC78
CDC25B
SLC25A44
ZSCAN10
COL18A1
RASAL3
ANKLE2
SLC11A2
PIGZ
NECAB3
TCF12
PPP1R15A
PLEKHA4
MAPRE1
GRPEL2
PWP2
LOC102724159
BHLHA9
GOT1
GNPTAB
KIF26A
ATP13A3
TARS2
DOLPP1
SEC62
ZNF839
NPIPB9
CCDC88C
MAFK
TMEM200B
KLHL8
HOMEZ
ZBTB38
LDLRAD1
SYNPO
CCR4
LIPA
HLA-E
GLIS2
SLC35E2A
MFSD4B
ABHD3
JAGN1
SNX11
VIPR1
PHKB
ITFG1
RCN1
FLCN
METTL22
INTS8
GGT1
GINS2
ANKRD18B
SH2D4B
PRDM6
MCM7
AP4M1
LIMD1
INPPL1
NAA20
ANKRD2
LCN8
CDKN3
GCH1
NMNAT3
CHRNA5
VPS8
FKBPL
ATF6B
HIBADH
RAB11FIP1
KCNB1
TRMT10A
MTTP
KIF3B
SVBP
ERMAP
HLA-C
ARHGEF5
UROS
BCCIP
PLLP
ATP5IF1
FABP6
ACTA2
DIP2C-AS1
NCOA2
GSAP
TRAF6
RAG1
NXN
GABBR1
SPOP
FBXO27
TRIM26
VPS53
FAM43A
PIK3CA
PCNX1
CAMK1D
SLC4A8
GALNT6
MLLT6
PCDHA3
TIAM1
PHF3
PDE4A
TK1
AFMID
TPK1
ADAM15
RALGDS
GPR84
TADA1
CENPN
PPIL3
NIF3L1
TRIM32
ASTN2
H2BC12
H2AC12
OLFM2
PTK6
SPATA25
NEURL2
CTSA
DEPTOR
ADRA2B
ABCA1
AGRN
KLF9
PTPN11
TBC1D12
AUTS2
CRYBG1
LIMA1
HDAC5
MEIOB
GM2A
C15orf39
UBE2Q1
SNRPC
MAD2L1BP
GTPBP2
ABLIM1
ANKRD63
FBXO9
CILK1
ZNHIT2
TM7SF2
SIRT4
RPL35A
IQCG
LRCH3
HDHD3
ANKAR
POLR2J3
AMZ2
EHF
PSMC3
PLBD2
RBM19
DVL3
B3GALNT1
MTMR14
KLHDC2
IQSEC1
NPY4R2
NPY4R
PKN3
RAN
PCF11
DUSP3
CFAP97D1
MSRB1
DGKA
NDUFB8
PRSS16
BACE2
PDCL3
TPGS1
P2RX4
ZBTB5
SPAAR
MUC3A
GBA
LPIN1
CCIN
COL23A1
PAXBP1
CDK12
UBE4A
TBC1D4
GOLM2
PSMB6
SRRD
HPS4
PLIN3
PTPRF
TFB1M
TRIM48
SPHK2
RPL18
FAM83E
BORCS7
STOML2
AP3B1
SLC39A10
RXRA
DDX17
LGR6
OLFML2A
MED23
CLIC3
PIGO
SH2B1
HNRNPA2B1
CBX3
F2
PPP6R1
ADGRG1
SLC39A11
PSCA
RABGGTA
CAVIN1
ZMAT2
RIN2
TESK1
AKNA
RASA2
MEF2D
CLTA
NEURL4
LUC7L2
IRF2BP1
MVB12A
FBXL19
ADGRL1
ETFB
SP2
NPAS4
SLC25A25
NAIF1
CLPP
MELK
DYNC2I1
SPAG8
HINT2
YWHAG
FMC1-LUC7L2
FMC1
RBM39
PPP1R13L
POLR1G
GSN
ZNF184
TEF
ENGASE
CETP
NUDT9
GPR137
SCAMP4
ADAT3
DAGLB
TOMM7
KANSL3
FER1L5
ADNP
ATG4C
MRFAP1L1
KRT15
STX6
DOT1L
RPS6
SCML1
MLX
NUP85
DLAT
WASF2
DIDO1
MSMP
EPRS1
TRIOBP
TMEM161A
LSP1
ZNF687
MATR3
SLC35A4
CYLD
APBB3
CTNNBL1
PRELID2
ICAM1
TGM2
TCF3
RAB14
PRPSAP1
TLN1
CREB3
SEMA4B
KDM3B
HRCT1
BCL9L
BAD
XKR8
RUSC2
MCC
SYMPK
FOXA3
SYT7
PLEKHG2
TUFM
SIT1
STK10
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
AKT2
CDON
GRSF1
ALDH18A1
GNE
PEX3
ADAT2
ZCCHC4
HCAR3
EIF5A
WDR59
MDGA1
LOC730098
CCL27
ARHGEF39
SSBP1
VPS37C
STX10
IER2