ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741424 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◣ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

CCIN
STOML2
MAMDC2
WDR74
CDK12
TBC1D4
CCDC107
ZNF335
FBXO43
SPAAR
GTF2H4
UBE2V2
MTRNR2L2
MSH3
DHFR
CCDC200
PIGO
MTRNR2L8
SP2
VPS37D
PSMB6
ARHGEF1
TESK1
CLPB
SPAG8
HINT2
AHCY
UBE2L3
PAXBP1
TFPT
PRPF31
MRPL45
UBFD1
EARS2
LOC730098
CCL27
PRPSAP1
MTBP
MRPL13
CCNC
EIF3E
RMND1
ARMT1
KANSL3
FER1L5
ZBTB40
COL23A1
CLTA
FRG2C
RPL27
RBM39
MSMP
NEURL4
NLRX1
NUDT9
TLN1
CREB3
RUSC2
NPR2
WDR43
PTPRF
GNE
INKA2
DDX20
SMG5
TMEM79
MELK
TRMT10A
MTTP
SIT1
C9orf131
DLAT
TMEM41A
MED23
MRFAP1
PLD1
CYRIB
PMEPA1
FRG2
PEX3
ADAT2
MRPL44
MRPS14
ZCCHC4
SLC39A11
HUS1
TRIP4
STX16
TGFB1I1
TEX46
KDM1A
LPIN1
UBE2F
MRFAP1L1
SYT7
HRCT1
NUF2
ATP5MC3
ARHGEF39
EI24
RIN2
GBA
SMARCD2
GTF3C3
ZDHHC24
ACTN3
CLIC3
DYM
SH2B1
RBBP5
DUX4
TGM2
ATAD2
MRPL21
IGHMBP2
RNF24
TPM2
ENGASE
ALDH3B1
UNC93B1
LTO1
XKR8
ZBTB45
PLIN3
BORCS7
TENT2
SOGA1
TMEM242
ZSCAN9
ZMAT2
MEF2D
SPHK2
RPL18
FAM83E
COMMD6
UCHL3
FKBPL
ATF6B
DNAJC19
ADPRHL1
ADNP
HAS1
VPS13B
FANCG
STX18
MTIF2
FBXW5
C8G
MCC
INTS2
TOR1A
TACO1
RGP1
GBA2
TJP3
RNF114
DPY19L4
ATR
GOLM2
TBC1D16
VMAC
NDUFA11
PPIP5K2
PRKAB2
CHD1L
HLA-E
DRG2
UTP25
POLR1H
C19orf25
LSM14B
ZNHIT6
RAG2
IFTAP
ZBTB3
EPS15
MACC1
UBE4A
RPP25L
RPS7
AARS2
MTRNR2L1
ARHGAP39
STAT3
CDC25B
CETP
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RNF216
RXRA
TEF
COPS7A
RFX1
PLEKHM3
PIH1D1
ALDH16A1
SRXN1
EFR3A
PDE4DIP
SPAG4
ZDHHC12
PRMT1
HCAR3
SLC35E2B
PSCA
TMEM18
RBL1
NDUFS7
LARP1
SYNGR2
GPCPD1
SHROOM2
SMG8
NUDT2
KIF24
SEC22B
PDSS2
YWHAG
GORASP2
ZNF408
ARHGAP1
NR6A1
TIMM9
KIAA0586
KDM3A
NUP85
PECAM1
TOMM7
IL11RA
CGGBP1
C3orf38
AARSD1
RBM28
KDM3B
NEK6
PPP6C
LMO7
MTF2
RAC1
COPS4
MTOR
KIF3B
PPP1R13L
POLR1G
SLC25A25
NAIF1
SLC38A10
SIRT6
ANKRD24
CSNK1G3
DDX1
RPS20
HIF1AN
EPRS1
AKIRIN2
BCAS3
PRR30
PREB
BANP
UBOX5
FASTKD5
SF3A3
RBM45
PDE11A
MRPL39
ERCC6L2
ZDHHC5
ZMPSTE24
ZNF165
SNAP47
JMJD4
HPS1
OSCAR
NDUFA3
ISOC2
MRPL12
MAIP1
PDLIM7
ZFAT
TTC21B
WWP1
FXN
MUC3A
HIBCH
PKD2L2
CDK8
ICMT
SSBP1
TIMM10
GABPB2
IPO4
SCAMP4
ADAT3
WDR59
FAM135A
WDR70
NCBP3
TCF3
DPY19L1
ARHGAP24
TNS4
DNM2
ITGB3BP
EFCAB7
NME1
COQ3
PIH1D2
NKAPD1
KRT15
TSEN54
CASKIN2
EFHD1
TATDN3
NSL1
MEX3C
ETFDH
C4orf46
UBB
TBC1D19
SSBP2
TDP2
ACOT13
ZSCAN30
ETFB
INTS12
GSTCD
DCTN3
AP1G1
LOC100130520
CD300H
LSP1
TRIM55
FKTN
CYGB
PRCD
TRIOBP
DSTYK
SLC9A1
TBPL1
CABLES2
ZNF572
GRSF1
NUDCD3
MRPS15
TCERG1
C17orf64
GAA
SUGCT
MPLKIP
CALM2
SIRT5
GTF2H2C_2
GTF2H2C
SMU1
MRPS33
RPS15A
H4C3
H1-6
SNRPD3
GUCD1
RWDD1
PPP5D1
CALM3
MATR3
NCOA5
MRPL16
TUBGCP3
SRRD
HPS4
RAB11B
PSMD4
SLC27A1
DENR
AGPS
GTF3C5
TRMT2A
RANBP1
VPS25
SLC35E2A
RHOD
MRPL38
PSMF1
RRP15
STK10
TARS2
PSMD3
NOP16
HIGD2A
FUT10
AP2S1
SEC13
MRPL58
CCDC88A
SLC30A6
TAF1C
ADAD2
BRIX1
TUBB
MDC1
ZCCHC14
CDK5RAP1
NOTCH2
GTF2H5
EIF5A
EIF5A2
SMIM8
TERF2
SEMA4B
EIF1B
CLPP
CRYAA2
CRYAA
RFX7
TEX9
SERPINB6
UNC13B
RGPD2
RGPD1
ATG16L1
ZNF131
SNU13
E2F6
ALG10B
PTEN
KLLN
MTR
PPP4R3B
PGM1
DHX15
ELP3
KLHDC8B
CCDC71
ZKSCAN8
MRPL3
CIPC
CCNI
CLUAP1
C16orf90
CTNNBL1
IFNAR1
RPL37
CCZ1B
METTL18
C1orf112
SPATA2
RASA2
SEPTIN7
ALKBH3
LRP6
CAVIN1
DAGLB
SLC35A4
APBB3
MELTF
NDUFAB1
AAR2
ATF6
ATP13A3
CNOT11
ANGEL1
PHKB
ITFG1
MT1M
MT1E
OSBP
ZNF391
UBE3B
KCTD10
APPBP2
TFB1M
RPS6
LIME1
DMAP1
SLC31A1
FKBP15
RECK
SLC2A4RG
EIF3C
EIF3CL
SLC26A8
MAPK14
INO80C
DDX18
PLS1
ZSWIM3
ACOT8
TNPO3
MICALL2
LIMK1
TRIM7
ZC3H15
VTA1
NMBR
CARD14
PGBD2
FUCA2
PLEKHG2
NDUFB3
FAM126B
TTC26
ZNF577
TMEM209
SSMEM1
ADRM1
LFNG
FBXO46
POLG
SUPT7L
SLC4A1AP
MTFR1
PDE4A
CSF3R
DPH5
METTL14
SEC62
COX7A2
ZDHHC6
VTI1A
CEP164
THEM4
ADGRG1
ZNF184
DTD1
MTMR14
EIF1AD
BANF1
FRA10AC1
WBP2
MLLT1
PRELID2
B4GAT1
TRAF6
RAG1
BRMS1
GALT
NUDT15
SLC35A3
ZNF35
PITPNA
CERCAM
REXO4
ADAMTS13
PTK6
PRDX1
MOB4
TRIM48
RPS14
PRUNE1
MINDY1
AMZ2
MRI1
NBN
MRPL48
TEX2
SMARCE1
COASY
SMCO4
MLX
NEMF
NKIRAS2
DNAJC7
WDPCP
MDH1
NECTIN2
PDE7A
RNF220
MED13
OSGIN1
SH3PXD2B
OPA1
KCNIP3
SLC7A4
RPS11
RNF38
PDCL
ZNF555
NEDD1
ZNF551
EIF2D
SMARCC2
SIGMAR1
TGM3
CFAP298-TCP10L
CFAP298
TMEM222
SLC29A3
C8orf37
MDFIC
IDH1
CCNT1
CASTOR1
RNF187
ZNF713
GTF2H2
PAFAH2
COPB2
MBTPS2
RNF7
TCTN3
NELFCD
AURKAIP1
ASB6
AGBL3
PCCB
SARS2
MRPS12
RUNX3
NDUFS5
RIN1
DCP1A
C6orf89
WDR7
C11orf49
TRIM41
DEF8
PTK2B
ERICH4
DMAC2
LTBR
ELOVL6
SLC18B1
VIRMA
SS18L2
SEC22C
PANK3
RBM25
NOP53
DRAM2
CEPT1
TP53I11
COMMD2
SH3GLB2
METTL25
CCDC59
ARHGEF16
SCAND1
ZNF76
SNRPB2
KXD1
MEGF8
LMTK3
FAM133B
POLR3B
YIPF3
POLR1C
PSMB3
PCGF2
SLC25A39
EVI5L
BCAR1
ZCCHC3
WDR31
TMTC3
CEP290
COA1
CDKN2AIPNL
PRMT5
KIF16B
ZNF606
STXBP3
DST
BEND6
DHX8
RBM4B
ATG4C
BDH1
RNASE4
NFE2L2
ANG
NSUN4
NECAP2
CSF3
COA6
TSKU
ZNF638
SYT11
GON4L
PTPN1
ARL14EP
BNIP1
RPAP1
TOMM22
RAB5B
AHSG
PISD
LRRC59
SOCS3
HMGN4
SLC44A1
ARAP1
BHLHA9
SREK1IP1
CWC27
TCIRG1
COX16
UPP1
RPN1
MRPL30
MITD1
SPAG16
CSTF2T
WASF1
CDC40
SAR1B
AKNA
KLF5
ANGPT1
ANKRD13C
SNRPB
DDX59
OMA1
DAB1
MYORG
FAM214B
C9orf24
BTBD10
SNX8
PFDN4
AJUBA
CRH
MARCHF7
CCN2
TSSC4
RNF149
EED
UTP3
EIF3F
MYCBP2
NPAS1
ISY1-RAB43
ISY1
COA3
CNTD1
GDAP1
MLPH
HMGCR
FOXK2
LEO1
TRIB1
CEP120
DCAF10
ZFAND1
SLC27A4
VARS1
ASXL1
TYW1
SBDS
RPL26
KHDRBS3
RGS9
PEMT
NOL8
CENPP
INA
C1S
TIA1
CIBAR2
PCBD2
CWF19L2
PRKCA
PTPN4
C20orf27
SIRT4
SCFD1
ABT1
RARS1
CCDC77
MAFB
KDM5A
MCOLN1
PRMT3
LARS2
LRRC37A3
ADAM19
RCC1
CEP78
LSG1
PNKD
NDUFS3
KBTBD4
BBS1
SRP68
AGK
GALR2
TIGD1
EIF4E2
C1QBP
FAM200B
IP6K3
CREBL2
USP35
KCTD21
SEPTIN9
CRLS1
ZZEF1
CYB5D2
STARD3NL
ZNF343
SPATC1
RBIS
ZRANB2
KMT2A
SGSM1
CHST12
PPP6R1
RIF1
CD36
CCDC71L
RNFT1
NR1H3
ACP2
C12orf73
ILF2
SLC35B1
GABARAPL1
CTSZ
HDAC5
EIF4A2
MRPS10
RTTN
CSF2
CZIB
CCL26
TRIM27
TEP1
MTHFD2L
SRPK1
KTN1
GK5
VAT1
RND2
RNF207
GUSB
RAB5IF
DTX4
ZNF501
TVP23B
RPL6
GSTA4
ARID1A
SEC14L1
NIPA1
AMOTL1
DUS1L
DNAJC25-GNG10
DNAJC25
QKI
NHP2
ACYP2
HASPIN
ACVR2A
SCML1
DSN1
RPL24
PSMB7
SAAL1
ZNF250
MRPL1
CUL9
TBC1D14
PPM1L
VPS37C
TRIM32
ASTN2
SCNN1A
POLI
TTC32
GIP
CLN5
ARNT
PLXDC1
CHRNA9
KDM4B
PLEKHG4
POU2F2
ANKRD46
ATF2
PRDM8
IMPA1
MAP10
CARMIL1
NICN1
MAD2L1BP
ARHGEF11
GTPBP2
COL21A1
ROBO3
SUCLG1
NVL
CHKA
ZBTB7B
GGCX
MAN2C1
TSGA10
PSORS1C2
BAG2
SLC25A16
ERCC1
LSM5
AVL9
TADA1
POLR3E
RPS3A
NLRP1
SSR3
DENND3
TMEM8B
FAM221B
RALB
PKIA
MTF1
HOXD8
TRMT1
NACC1
SHFL
PHC2
NIPA2
LAPTM5
ITPKC
COQ8B
TAS1R1
NOL9
TUBE1
FAM229B
USP15
COG2
IREB2
MRPL35
IMMT
TSC1
GFI1B
CBX4
RPL38
NOL11
BSND
TPRKB
ZC3H6
ZSCAN26
TEPSIN
NDUFAF8
USP32
TOE1
MUTYH
HIPK1
CORO1C
ZNF629
SMG7
SRSF7
DCAF8
REX1BD
SHLD2
GLUD1
MRPS31
CDC37L1
TTLL7
KPNA2
DCDC2
PDCL3
KAAG1
FASN
C16orf95
CTPS1
TIMM23
SNX19
NOP14
GRK4
SPNS1
PPM1A
PTGS2
CNTFR
SPOCD1
ERGIC2
H4C4
PPP2R5B
RIOK1
CAGE1
KDSR
DYNC2I1
SYMPK
FOXA3
PARP2
SNRPC
OPA3
RIPOR3
MDM4
ADAR
VPS16
PCED1A
H4C14
PDE2A
H4C15
MYH7B
GSS
CFAP20
RSPH6A
ZNF674
UMAD1
PLEKHA6
MNAT1