ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741418 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◣ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

CCIN
PTPRF
CCDC107
GTF2H4
TBC1D4
LPIN1
WDR74
BORCS7
MAMDC2
SPAAR
TRMT10A
MTTP
HLA-E
ZMAT2
MRPL45
PSMB6
UBE2V2
ZNF335
PIH1D1
ALDH16A1
NEURL4
MTRNR2L8
VPS37D
RNF24
CYRIB
OSCAR
NDUFA3
RNF216
RXRA
PRMT1
RASA2
AHCY
MELK
NLRX1
YWHAG
EI24
SLC35E2A
SLC39A11
FBXO43
CDK12
TOR1A
NR6A1
OLFML2A
MTRNR2L2
MSH3
DHFR
SMU1
C19orf25
PMEPA1
MEF2D
PLIN3
HCAR3
STOML2
TESK1
LSP1
MRFAP1L1
RBM39
UBE2L3
HAS1
KXD1
PIGO
RIN2
ARHGEF1
RPS14
ENGASE
DLAT
TGM2
RAC1
MSMP
DPH5
NUDT9
TEF
ZNF638
ZNHIT6
FBXW5
C8G
UTP25
UBFD1
EARS2
SMCO4
TOMM7
ZFAND1
XKR8
DRG2
EPRS1
ADRM1
WDR43
SLC29A3
EPS15
CLPB
CLIC3
SEC22B
DNAJC19
ZCCHC4
CCDC200
KRT15
SMARCD2
CAVIN1
ALDH3B1
UNC93B1
DNM2
KDM3B
AKIRIN2
SP2
PRR5L
COMMD9
CTNNBL1
AARS2
CDC25B
HAX1
MTRNR2L1
SPATA2
UIMC1
PTK2B
SEPTIN9
EED
MATR3
TKT
MED23
DYM
PTPN1
ZDHHC24
ACTN3
SETD1A
CLTA
RUSC2
MCC
MLLT1
PDSS2
ST3GAL4
SIT1
TENT2
STK10
PRPSAP1
SLC25A16
ZCCHC14
MEGF9
PSMD4
ARHGEF39
SLC31A1
FKBP15
SOGA1
MT1M
MT1E
ZMYM1
FXN
TJP3
SPAG8
HINT2
PKD2L2
HRCT1
ZDHHC12
SPAG4
PLD1
AARSD1
COASY
MLX
EFR3A
WDR59
RIF1
SRRD
HPS4
PRMT5
TPM2
SPATC1
PHKB
ITFG1
FKTN
ATG4C
LOC730098
CCL27
TIMM10
UBOX5
FASTKD5
TRIOBP
FKBPL
ATF6B
TMEM161A
NUP85
CNOT11
OSGIN1
ZNF131
NDUFS5
RGPD2
RGPD1
ZBTB3
CDK8
TCIRG1
GHITM
TEX46
KDM1A
ADGRA2
DRAM2
CEPT1
TFB1M
ATF6
SPHK2
RPL18
FAM83E
TAF1C
ADAD2
TLN1
CREB3
NUDT2
KIF24
TDRD7
RUNX3
ANGPT1
LTO1
NELFCD
LIMK1
ELP3
ADGRG1
CRLS1
RCN1
SIRT5
SLC25A25
NAIF1
PAXBP1
LSM14B
RPL6
SLC35A4
APBB3
PDCL
MRFAP1
PLEKHG2
PKD1L2
TERF2
ATP13A3
LMO7
CBX4
GPCPD1
ST6GALNAC4
RPL13
CCNT1
SYNJ2
TBC1D16
GGCX
ERCC6L2
UBE4A
SH2B1
TMCO6
CD14
SRPK1
PITPNA
RIOX1
ARNT
GSTA4
CABLES2
GLIPR1L2
CLUAP1
C16orf90
SLC25A44
STAT3
CCNC
DAGLB
GRSF1
TRIP4
GABARAPL1
TIA1
PRR30
PREB
PECAM1
EIF3C
SYMPK
FOXA3
NCOA5
ADPRHL1
CWF19L2
SEMA4B
CETP
FRG2
CLK3
PCBD2
KCTD18
PPP6C
NOL11
EIF5A
IL11RA
VPS13B
SYT7
SNU13
NUF2
METRN
GK5
HPS1
PSCA
CIAO3
C9orf131
TPK1
ADA
LARP1
GPSM2
DENR
FOXK2
ATP5PD
SLC26A8
MAPK14
STXBP3
RPP25L
ZC3H15
RAB5C
PDCL3
LAPTM5
LDLRAP1
MRPL38
MRPL44
RPTN
PANK3
RBM4B
FAF1
LFNG
PDE4A
PGLS
CDYL
PREX1
ABT1
TRMT1
NACC1
HIBCH
TRMT2A
RANBP1
DIO1
RPL36
COMMD2
SSBP1
C17orf64
GTF2H5
COX7A2
PNPLA6
AP3B1
PPP1R13L
POLR1G
AP2S1
GABPB2
CACTIN
TNS4
UQCR11
FAM200B
LY96
FBXO27
KIAA0895
ANGPTL6
ANLN
DUX4
DOT1L
SLC38A10
SARS2
MRPS12
MRPL54
APBA3
ZNF551
DAAM1
CIC
PAK4
ARSD
BRAP
ACAD10
CNN1
SLC35B1
TOM1L2
DRC3
MRPL39
SLC27A1
METTL14
ARHGAP39
POFUT1
PLAGL2
GNE
CACUL1
POLG2
MAP3K10
FRG2C
COL23A1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DUSP1
MED18
LEO1
PIP5KL1
DSTYK
C16orf70
SGSM1
SLC30A6
NCBP3
ICAM1
ECSIT
RAD52
TRIB1
CHMP6
ZNF184
ILF2
EMC4
PCCB
CRYAA
CRYAA2
HEXB
GALT
MORC3
ELFN2
MARCHF7
CHST12
MFSD4B
ICMT
ZBTB45
FAM168B
NLRP1
GSN
RAB14
DDX18
TMCC1
OSTF1
NMRK1
ZNF70
VPREB3
ISOC2
H6PD
DPY19L4
ATP6V0E1
E2F6
TRIM26
MRPL48
NDUFS7
USP45
TSTD3
SWSAP1
PEX3
ADAT2
TRIM41
FANCG
ACOT9
FBXO46
TBPL1
PFAS
CTC1
MPRIP
TIMM23B
PARG
SMG8
VPS37C
ZZEF1
CYB5D2
RS1
PPEF1
TSACC
CCT3
TRAPPC3
MVB12A
AKNA
DPP3
PDE4DIP
PRXL2C
TGM3
PPP6R1
CASTOR1
LTBR
COMMD6
UCHL3
TOR1AIP2
TOR1AIP1
MTRNR2L9
SRXN1
DYNC2I1
TIMM9
KIAA0586
REXO4
ADAMTS13
MAGI3
FAM98B
CEP164
LZTS3
CRTAP
ATP6V1E1
GADD45B
FASN
NDUFAB1
SMNDC1
ATG16L1
FRA10AC1
NUCKS1
CTR9
PSMD14
NIBAN2
RHCG
SLC25A20
SLC44A1
IER5
LYPLA2
TCF3
RAB2A
SYT11
GON4L
TIGD1
EIF4E2
TPP2
EMC8
COX4I1
PTPN4
POU2F2
ARMC7
TRIM48
NOTCH2
RFX1
STX16
DMAP1
TIPARP
WDR70
SPOCD1
SMARCC2
SBK3
NFIC
OSBPL5
TAC4
MANBAL
ALG10B
UPP1
HIVEP1
ERICH4
DMAC2
GRK6
ZNF554
SEC14L1
EGR1
C20orf27
KIF2C
RACK1
ARTN
SMIM8
PCBP2
TCTN3
CCDC117
WASF2
MRPL12
IFNGR2
ASXL1
UBE3B
KCTD10
KIF16B
ABRAXAS2
TGFB1I1
TSEN54
CASKIN2
TTC4
RAB11B
KDSR
GADD45GIP1
TRIM55
PRRG2
NOSIP
UNKL
BIRC7
USP35
KCTD21
RHOD
WNT7B
SHFL
KANSL3
FER1L5
RPS7
BRIX1
DNAJC11
MFAP4
ZNF606
MTF2
MCM7
AP4M1
VKORC1
RECK
FAM220A
ZNF77
RNF114
DARS1
FGF14
CLMP
CLPP
HPS6
SCAMP4
ADAT3
ARFGEF2
FPR1
KIAA2013
DIS3
CALHM5
ARPC3
ZNF408
ARHGAP1
HIPK3
RPS12
MEX3C
ARHGEF16
GFPT2
PLEKHA7
UBXN4
LSM5
AVL9
PTPN3
SP1
BAHCC1
CLCF1
UBE2D2
CCDC22
CACNA1F
BEGAIN
EHD2
PFDN2
NIT1
TK1
AFMID
SH3PXD2B
LOC112267881
MT1F
MT1B
NKIRAS2
DNAJC7
TAF5
THEMIS2
TOX2
ARRDC1
CYLD
ASF1B
TIMM22
BNIP1
DUS1L
PRDM8
ELMOD2
PDLIM7
TMEM242
DHX15
VARS1
ZNF526
H2BU1
H2AW
INTS12
GSTCD
TGDS
XPO5
POLH
TP53I11
POLR2D
ZNF687
SIRT4
EEF1AKMT1
RAB4B
MIA
OPA3
CIBAR2
ANAPC11
TPM4
ALYREF
NDUFS3
KBTBD4
SEC13
ZNF256
PDE8A
SF3A3
RPL37
RPL24
BCL9L
ADAM19
POLR1H
CORO1C
YIF1B
KCNK6
CERCAM
TSPAN16
TRABD
ZNF281
MRPL35
IMMT
ZSCAN25
USP42
EIF5A2
BANP
PHACTR4
UNC13D
TNFRSF18
TRERF1
CDA
MPC2
DCAF6
KRT79
RABGEF1
DCDC2
CDC5L
TRIM59
GRHL3
WDR7
OMA1
DAB1
KAAG1
SNX12
ZFAND5
PRUNE1
MINDY1
IQCE
HUS1
TARS2
MYOM3
TYW1
SBDS
TCERG1
COQ3
NUMA1
LRTOMT
SPTBN4
INO80C
PISD
ZSWIM3
ACOT8
FAAP100
IKBKE
UTP3
RIN3
COX5A
PLEKHM3
NDE1
MARF1
ARHGAP24
SHROOM2
DAG1
CCDC43
CDK5RAP1
LACTBL1
RBM12B
MAP2K6
SPRY1
ZFP36L1
PPP2R2A
GORASP2
YTHDF2
SUGCT
MPLKIP
FUCA2
UBAP1
TAS1R1
NOL9
ACOT7
MTERF1
USP43
RPS6
ZNF572
CTSZ
C6orf226
RPS20
TEAD1
PSMD9
HPD
RPL37A
WDR11
CLIP2
TMC1
CARD14
CIZ1
OPA1
SNTB2
ZNF385B
MMP17
SLC9A1
TTC38
PKDREJ
ZBED9
DPY19L1
KDM4B
PRDX1
ZRANB2
GASK1B
COL18A1
H3C8
H2BC10
RBM7
C11orf71
SLC16A8
GPR160
GALNT10
ERCC1
SNUPN
ZER1
FEM1A
STAT6
MKNK2
SNRPC
ABCC3
ZCCHC3
SSBP2
FLVCR1
WBP2
DENND6A
GOT2
LUC7L2
FMC1-LUC7L2
FMC1
ENSA
TCEA2
TTI2
DNAI1
TIMP1
FAM219A
TMCO4
SPATC1L
NEDD1
NPR2
TBC1D19
GTF2IRD2B
GTF2IRD2
POLR1F
SRP19
TUBE1
FAM229B
DEF8
EIF3D
DSN1
AMOTL1
VTA1
NMBR
ARL14EP
LITAF
PTK6
EML2
TMEM184A
CCDC42
FABP6
ANK1
CDK11B
CDK11A
H4C6
ATP5IF1
COX20
ODC1
LRRCC1
SCML1
NEK6
S1PR4
IRGC
TNFRSF6B
SAR1A
CKM
MRPL30
MITD1
IFT46
KLHL12
HSD17B11
SLC7A4
MRPL1
ZNF330
KIFBP
H2BC12
H2AC12
DIDO1
TADA1
CDAN1
SH2D5
LPIN3
ABCA1
UBA52
NSFL1C
SLC27A4
SYNGR2
NCOA7
PRKAR1B
HMGB1
TIMM23
USPL1
IPO13
CZIB
H1-3
MRI1
RNASE4
ANG
RBM12
CPNE1
ZNF579
CDC42BPG
TRAM1
MCIDAS
RBBP5
SDAD1
PRKCA
CFDP1
ETFDH
C4orf46
GNA13
ROBO3
IP6K3
HSPA6
HHAT
PRELID3A
AP2A2
COPS4
TUFM
MOSPD3
WIPI2
ZFAT
ARHGEF11
PPAN-P2RY11
PPAN
VPS16
PCED1A
RPN1
PABPN1
PRELID2
CDK9
PMM1
CEP78
MYCBP2
H4C8
WDR75
C4orf48
IRF2BP1
ST6GALNAC6
HMGN4
RPL38
AGPS
TRIB3
VSTM2L
EIF3L
ANKRD54
MTHFSD
BNIP5
NAT10
CCDC153
ADNP
NICN1
AMZ2
DYNLRB1
IL1RAP
FIBCD1
HEATR6
UBE2R2
EID2B
PLXDC1
DOLPP1
MYO1C
DENND3
CCDC97
FAM156B
FAM156A
PCNA
KANSL1
TES
NXPH3
MICALL1
LGR6
MRGBP
CTDSP1
FOSL2
TACO1
RAB5B
CHRNA9
TMTC3
CEP290
TACC2
PSMB3
PCGF2
MTMR14
COX16
MTBP
MRPL13
GTF2H2
APC2
MT2A
GORAB
LY6G6F-LY6G6D
LY6G6F
ABHD16A
TMEM89
LDLRAD1
RAN
HERC5
ELAVL1
RTN4RL2
THAP9
SEC31A
TIRAP
PSMC3
ANKRD40
RAG2
IFTAP
SIGMAR1
TPRA1
VPS53
ZNF577
RIC8A
BET1L
SIPA1L2
ZNF234
LIMS1
TMEM37
NBN
SAAL1
RHNO1
FOXM1
PTOV1
ETFB
MICALL2
RBM45
PDE11A
PPP4R3B
PIGL
NCOR1