ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741420 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◣ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

WDR74
SPAAR
MTRNR2L8
GTF2H4
PTPRF
MAMDC2
CCDC107
TRMT10A
MTTP
PSMB6
CCIN
MRPL45
VPS37D
MTRNR2L2
MSH3
DHFR
ZNF335
PIH1D1
ALDH16A1
LPIN1
TOMM7
MTRNR2L1
BORCS7
RGPD2
RGPD1
FBXO43
NUDT9
SLC35E2A
TBC1D4
RNF24
RASA2
SMU1
RXRA
ZMAT2
SLC39A11
UBE2V2
MRFAP1L1
CYRIB
HLA-E
NLRX1
UBE2L3
MEF2D
CDK12
ADRM1
YWHAG
CAVIN1
CTNNBL1
RUNX3
TESK1
AHCY
RNF216
MELK
UBFD1
EARS2
XKR8
NR6A1
TOR1A
PLIN3
OSCAR
NDUFA3
CLTA
WDR43
KXD1
MED23
NEURL4
C19orf25
PHKB
ITFG1
NCOA5
PIGO
HCAR3
UBOX5
FASTKD5
MRFAP1
ZDHHC24
ACTN3
RIN2
ZDHHC12
SPAG8
HINT2
DLAT
COL23A1
MCC
DPH5
RPL6
ATF6
EPRS1
PRR30
PREB
CFDP1
STOML2
PLD1
HAX1
DAGLB
ZNHIT6
CWF19L2
KRT15
SOGA1
PMEPA1
OSGIN1
TERF2
ARNT
RAC1
PRMT1
ARHGEF1
GTF2H5
ENGASE
HRCT1
FOXK2
CRLS1
AP2A2
TIA1
MSMP
AP2S1
PAXBP1
STK10
ST3GAL4
SIT1
ZCCHC4
SMARCD2
AKNA
RUSC2
ARHGEF39
DAAM1
LOC112267881
EIF3C
EIF3CL
CLIC3
UTP25
MLLT1
AARS2
FKTN
LACTBL1
FXN
KDM3B
TKT
EPS15
CETP
VCP
PRMT5
ZNF131
GPCPD1
ICMT
CDC25B
CLK3
LSM14B
GRSF1
HAS1
LDLRAP1
SCML1
KTN1
SLC29A3
PAK4
CCNC
CNN1
ZNF184
SLC26A8
MAPK14
MVB12A
ALDH3B1
UNC93B1
TLN1
CREB3
AKIRIN2
LAPTM5
DRG2
TRMT1
NACC1
ATG4C
TIMM23
LPAR2
ZNF638
LEO1
MATR3
ARHGAP39
ATP13A3
CNOT11
DMAP1
LARP1
EED
EIF3D
TRIM48
SPHK2
RPL18
FAM83E
SEPTIN9
CDKN1A
TAF1C
ADAD2
PDSS2
SLC35A4
APBB3
IRGC
DOT1L
DYM
TMEM161A
MRPL54
APBA3
DNAJC19
RPS14
FAM8A1
SRXN1
FBXW5
C8G
LUC7L2
SP2
FMC1-LUC7L2
FMC1
LOC730098
CCL27
NEK6
GABARAPL1
HPS6
SMCO4
CLPB
FKBPL
ATF6B
TGDS
MT1M
MT1E
CDK8
POLG2
EI24
PDCL
FRG2C
PPP1R13L
POLR1G
STX16
RPL37
MRPL58
PDCL3
SYT11
GON4L
TIMM23B
PARG
SPOCD1
DUX4
NDUFS7
RBM4B
SEC22B
TEF
ZMYM1
NUP85
ADGRA2
H4C6
NUF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FANCG
STXBP4
COX11
GADD45GIP1
RPTN
SMARCC2
SH2B1
PDE4A
TUFM
C16orf70
CD151
CCDC200
SCAMP4
ADAT3
FRG2
TPM2
SLC44A1
TAC4
RPL36
ADPRHL1
GRPEL2
SLC38A10
TBC1D16
C17orf64
PSCA
TGM2
ZNF551
RPP25L
ZBED9
KLHL5
ADGRG1
SLC25A25
NAIF1
SLC25A20
ZZEF1
CYB5D2
EIF5A2
HIPK3
CEP164
HEXB
FASN
ZBTB43
MEGF8
TRIP4
TPK1
C4orf48
KDSR
NUDT2
KIF24
TARS2
SPATC1
RPL10A
OSTF1
NMRK1
ADNP
PTPN1
PCCB
TFB1M
MRPL35
IMMT
TENT2
TRIM41
IFNGR2
SLC7A2
CBX4
TRIOBP
LSP1
RBM12
CPNE1
KANSL3
FER1L5
SEC14L1
HMGN4
PANK3
TYW1
SBDS
RAB2A
ATR
INTS5
UIMC1
LFNG
DENR
KLF5
TRIM55
CTSZ
FPR1
ENSA
DHX15
ELOVL6
TRAPPC3
SORBS1
IL11RA
SGSM1
PDLIM7
ETFB
EFR3A
TIMM10
FAAP100
SETD1A
SLC9A1
DHRS3
TJP3
MRPL38
CHST15
RBM39
GHITM
MEX3C
RIOX1
CSRNP1
PLEKHM2
SRRD
HPS4
ZCCHC14
PTK2B
MTMR14
ASXL1
DIDO1
TCF3
PTPN4
SIRT5
DNM2
IQCE
MRPL44
GLIPR1L2
PGLS
DGKZ
MEGF9
DDX18
SSBP2
CASP4
HPS1
PKD2L2
DPF2
PSMB3
PCGF2
CAMK2G
SMG8
MCM7
AP4M1
UROS
BCCIP
NUMA1
LRTOMT
SNRPC
LRRC37A3
TDP2
ACOT13
SPAG4
GABPB2
SNTB2
CCNT1
CCDC22
CACNA1F
CIC
ZC3H15
CRTAP
MAP2K6
AARSD1
ELAVL3
PITPNA
SSBP1
GK5
NFE2L2
RECK
SPATA2
GNE
ZNF555
GFUS
KRBA2
PRPSAP1
ZFAND1
NELFCD
SMG5
TMEM79
BMS1
PLEKHG2
SNU13
LIMK1
ALG10B
DCT
RBM12B
PKD1L2
EGR1
PREX1
TMEM242
MMP17
SARS2
MRPS12
ABCC3
MT2A
SBK3
ATP5PD
SDAD1
MARCHF7
CARD19
PLEKHA7
GSTA4
CIBAR2
PTPN3
NCBP3
FDPS
FAM168B
IER3
FLOT1
CIAO3
CARD14
TMCC1
UBE4A
ATG16L1
MPRIP
CCDC117
RPL13
BIRC3
TM2D1
RABGGTA
ICAM1
EMC8
COX4I1
DNAI1
TAF5
BEGAIN
IL4I1
CA9
POLR3E
TRIM59
TOR1B
PSMD5
TMEM68
TGS1
FBXO46
RNF114
YTHDF2
SNRNP35
TMEM214
TRIM32
ASTN2
RGP1
GBA2
MT1F
MT1B
EVI5L
ELAVL1
PCID2
CUL4A
MGAT1
RAB11B
MRPL39
EIF3E
CCR4
C1QTNF8
KIF16B
COASY
MTOR
ZFAT
PRKCA
GSDMD
EMC4
METRN
RCAN1
SLC45A4
CST4
RIF1
COMMD2
TMEM107
HSD17B11
GGCX
CCDC43
TSEN54
CASKIN2
SCFD1
MRPL12
TRAM1
ANGEL2
CD72
ROBO4
PECAM1
CLPP
PEX3
ADAT2
DHX16
LZTS3
TBPL1
SLC27A4
C1QTNF1
MYCBP2
SLC26A11
PSMD9
HPD
VPS13B
EHF
TNFRSF18
YPEL3
TBX6
GALT
FAM220A
SIGMAR1
GNA12
STRADA
TBX3
RPS12
SUN1
TLE2
ZNF606
C9orf131
IER5
CIDEC
NANP
RBMS3
PHOX2A
CIZ1
ATP5MC1
HIBADH
PHC2
ZNF839
RTN4RL2
LAMA5
SLC30A6
ESCO1
TMEM267
WDR59
FOSL2
MANBAL
MYL10
GORASP2
ARSD
MAML3
DDIT4
REXO5
ERI2
LAMTOR5
MAP4K1
EIF3K
HIBCH
MAD2L1BP
GTPBP2
DVL1
MUC3A
SNX16
RFX1
NUCKS1
CACTIN
GBA
METTL14
MTRNR2L9
OLFML2A
LGR6
CPPED1
ISOC2
F2
AP3B1
CNOT3
BRAP
ACAD10
GADD45B
ZBTB3
SYNJ2
DIO1
LTO1
GLIS2
IRF2BP1
PIGBOS1
PIGB
SWSAP1
SLC25A16
FBXL19
GOLM2
CASTOR1
CHST12
USP35
KCTD21
NAE1
DYNC2I1
KIF2C
TRIM26
NPAS4
MLX
ZFP36L1
ZNF687
SRPK1
SLC35B1
UBXN4
PTPRA
MRGBP
ZNF77
WASF2
RPS6
SCGB1C2
SCGB1C1
CABLES2
MKNK2
SYMPK
FOXA3
ATP6V0E2
PRR5L
PRELID2
COMMD9
AKT2
TCIRG1
PSMD4
CYLD
ILF2
SRCIN1
CLUAP1
C16orf90
UBE2Q1
PPP5D1
CALM3
RHOD
COPS4
TIMM9
KIAA0586
SPATC1L
SEMA4B
KIFC3
CSF3R
GSN
RASA4
CTR9
RAB5C
EIF5A
CHMP6
KLF1
GCDH
VPS37C
TP53RK
SLC13A3
RBBP5
BCL9L
TCTN3
GPR160
OR2T1
ZNF234
MFSD4B
PITPNM1
POFUT1
PLAGL2
CYB5B
WNT7B
RPL27
TK1
AFMID
ZBTB40
NICN1
CTDSP1
NCOA6
GPSM2
SREBF1
SHFL
TIGD1
EIF4E2
TSC1
GFI1B
H6PD
ZNF500
ZSCAN25
LIME1
ABRAXAS2
HES7
UEVLD
RABGEF1
DPP3
SIRT4
RNF213
RPL37A
EEF1AKMT1
SLC27A1
RAPGEF1
ST6GALNAC6
MICALL2
PSMF1
GALNT10
ZBTB45
USP45
PRUNE1
MINDY1
ERCC1
RAB4B
MIA
LOXL4
CRYAA
CRYAA2
TTC38
PKDREJ
PPP2R2A
STAT3
MEMO1
GEMIN6
HUS1
RASA4B
LRP5L
GTF3C3
RAB14
CAMK1
STARD13
CDK5RAP1
PRR5-ARHGAP8
PRR5
ADAM19
HM13
LSM5
AVL9
GPR84
PDLIM1
CDK9
UBE2F
KANK2
ALOXE3
RNF187
NEDD1
MTRNR2L10
STX10
IER2
ZFAND4
PPP6R1
ASF1B
LMO7
TMEM184A
TDRD7
TRAPPC6B
PNN
IL12RB1
ECSIT
UTP3
RPS29
GAMT
FABP1
DCDC2
NEK10
RPS7
TSNARE1
ARPC3
BCAS1
MOSPD3
OPA3
TFAM
RCC1
SLURP1
TACO1
COX16
NPR2
PPP1R9B
ATP5MC3
ZNF771
CLU
SLC25A39
ERICH4
DMAC2
TEX46
KDM1A
S1PR4
PPP1R9A
TPP2
TM9SF4
RTKN
EMILIN2
DCTN1
MTBP
MRPL13
DGAT2
USP42
TIPARP
C8orf37
DEF8
ELP3
SLC31A1
PSMD3
FKBP15
MRPS23
NUDCD3
MBD4
IFT122
CENPN
SLC35E2B
ZNF443
AURKAIP1
SYT7
ADAMTSL5
OGFOD1
NUDT21
KLHDC9
C3
BCL9
DSTYK
WIPI2
SLC12A4
PDE6B
RMND1
ARMT1
RIN3
ARHGAP35
NUDT8
RAB5B
SRC
RAD52
MAST3
IFNAR1
TADA1
SF3A3
PPP6C
LMTK3
TBRG4
TGFB1I1
MTF2
METTL3
ZNF764
RPL38
EFNA4
KDM3A
DSN1
PDE4DIP
KATNIP
GTF3C1
DPY19L4
SLC25A44
H4C3
H1-6
ITGB3BP
EFCAB7
SYNGR2
TSTD3
SH3GLB2
USP36
SLC13A5
COX5A
PPIL3
NIF3L1
ZNF713
BBC3
TBC1D19
NDUFAB1
PMM1
SPC24
PYY
NAGS
SERPINA1
ANXA2
MRPS14
UQCC1
TSACC
CCT3
TSKS
AP2A1
RFX7
PCBD2
REXO4
ADAMTS13
NDUFB4
LTBR
DUSP1
TMC8
TMC6
SHISAL2A
ASGR1
MRI1
ZNF799
GNG7
SEC14L4
RAB8A
EIF1AD
CCDC42
BANF1
ZNF572
WDR70
MED18
FCMR
COMMD6
RCN1
PLXDC1
PHLDA2
LRP5
INTS12
GSTCD
ANKRD13C
TMEM41A
PFAS
CTC1
TCEA2
SEC13
ARHGEF11
NUDT18
NEMF
GRK1
FAM89B
EHBP1L1
SPTBN4
APOH
MARS1
ARHGAP9
EBI3
ADA
TNS4
RS1
PPEF1
NIBAN2
FAF1
TADA3
PLEKHM3
ATG9B
ARPC4-TTLL3
ARPC4
ABCB8
UPP1
UCHL3
HOMEZ
HEATR1
CBY3
ARFGEF2
SDR39U1
NME1
NEMP2
AGPS
TRIB3
NRL
DCAF11
CDA
TTYH3
QRICH1
RRP1
CBX1
TECTB
SNUPN
RNF207
MAD1L1
USP48
ZNF24
TFPT
PRPF31
KIAA0895
ID1
TGFBR2
NDUFS5
COX7A2
BORCS6
CCDC130
PGPEP1
C1QBP
ZSCAN9
UQCR11
RNASE4
GRK6
ANG
CRYGB
SNRPD3
GUCD1
C5AR1
SUOX
PGC
RBPMS
BDH1
PNPLA6
KLHDC8B