ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
WDR74
CCIN
MTRNR2L2
MSH3
DHFR
SPAG8
HINT2
CDK12
STOML2
PIGO
MTRNR2L8
CCDC107
TBC1D4
MED23
UBE2F
PSMB6
PEX3
ADAT2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PTPRF
VPS37D
RASA2
MTRNR2L1
ARHGEF1
ZBTB40
LPIN1
CLTA
RPS7
TRIM48
RGPD2
RGPD1
RNF216
HRCT1
TRMT10A
MTTP
TRIP4
INTS12
GSTCD
ATP5MC3
UTP25
RPL27
TESK1
DMAP1
COMMD2
H4C3
H1-6
TEX46
KDM1A
MRFAP1L1
AKIRIN2
AURKAIP1
POLR1H
ZDHHC5
CLIC3
GTF3C3
TOMM7
UBE2L3
RMND1
ARMT1
RUSC2
AHCY
NFE2L2
FRG2C
SIT1
TLN1
CREB3
LRRC37A3
AP2A2
SIRT5
ARL14EP
NLRX1
SSBP1
ZKSCAN8
TOP3B
CLPB
SLC35E2A
GNE
ZCCHC4
DNAJC19
PDCL
PHKB
ITFG1
MRPL45
PSMF1
TSSC4
MSMP
TRIM55
MT1M
MT1E
GTF2H4
CYRIB
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
ZFAND1
ARHGEF39
IL11RA
TRAPPC9
SNRPB2
OSCAR
NDUFA3
COX7A2
CCDC200
RBM39
RBBP5
ATR
ZSCAN9
CD36
ZNF335
MRFAP1
EIF3E
MRPS14
EPRS1
KIF3B
UBFD1
EARS2
NR6A1
RNF24
ELP3
TBC1D19
WDR43
CABLES2
DYM
FAF1
SLC39A11
NCOA5
C9orf131
GBA
NDUFS7
SMG5
TMEM79
GTF2H2
NPR2
ERCC6L2
UBE2V2
TENT2
ENGASE
PPP5D1
CALM3
DPY19L4
LFNG
SLC35B1
TEF
CTNNBL1
RGP1
GBA2
MTERF1
SPHK2
RPL18
FAM83E
TACO1
PANK3
PRDX1
MAD1L1
SLC9A1
DSTYK
PRMT1
STX16
FANCG
FRG2
AARS2
RPS14
REXO4
ADAMTS13
MRPL58
FBXW5
C8G
TRIOBP
HIBCH
INKA2
PLEKHM3
DDX20
ZMAT2
VCP
RXRA
YWHAG
SF3A3
AMZ2
EIF1AD
BANF1
EIF4A2
CASC3
CRLS1
MYCBP2
DUX4
GPCPD1
MELK
DPH5
AP1G1
ZER1
COL23A1
PRPSAP1
NUDT2
KIF24
FAM8A1
NFX1
LOC730098
CCL27
TMEM242
UNC13B
RRAD
PAXBP1
DRG2
RPL38
RAC1
CETP
TPM2
MTF2
RIN2
DDX18
COMMD6
ZMPSTE24
SNAP47
JMJD4
RAD52
SLC28A3
ADNP
CCNC
FBXW2
MRPL35
IMMT
CDK5RAP1
RRP15
TFB1M
MRPL39
DNM2
EIF3F
NDUFC2-KCTD14
NDUFC2
RECK
EDC4
AP4E1
NOTCH2
EI24
CDC25B
PDE4DIP
ZNF638
NDUFAF4
KLHL32
UIMC1
MVB12A
EIF3D
ZKSCAN2
MRPL12
MRPL30
MITD1
RGS20
ASXL1
POLG2
YTHDF2
ZNF165
TMEM222
SMARCD2
SMU1
SEC22B
ZBTB3
MRPL38
EED
STAT3
MRPL44
RPL37
ADCY4
ZSCAN16
PLEKHG2
HIF1AN
NOL11
MRPL3
ATF2
CCDC88A
JAG1
PIH1D1
ALDH16A1
FKTN
ZDHHC24
ACTN3
SP2
FOXK2
PDCL3
ATP5PD
PAFAH2
WDR31
ZNHIT6
GORASP2
WDR70
PDCD6
ALG10B
PCCA
ZNF8
FXN
UBE4A
NUTM1
NOP10
RNFT1
NUDT9
CIC
PSCA
POLR2M
P3H4
FKBP10
SH2B1
SNRPE
DOT1L
PECAM1
UCHL3
SMCO4
LUC7L2
PRELID2
MDM4
TANK
TXNDC11
ZNF461
PERM1
MSL2
PLCD3
ACBD4
C8orf37
RSPH6A
LMAN2
CARD14
PRICKLE3
COPS7A
DCP1A
FAM133B
ADM
DPEP1
ELFN2
RPL10A
LRRC59
FAM227B
DTWD1
MAMDC2
MUC3A
SNX16
KXD1
ZDHHC12
RFX1
MTRNR2L9
NUCKS1
SGSM1
C1QTNF8
CACTIN
SOGA1
ATG16L1
COASY
MLLT1
SLC29A3
TOR1A
FBXO43
SPATA2
TRMT1
NACC1
METTL14
C19orf25
SORBS1
EIF3C
ADRM1
TKT
GOLM2
EIF3CL
TERF2
PRMT5
HLA-E
SETD1A
PSMD9
HPD
SRRD
HPS4
GADD45B
PLIN3
ZFP36L1
CEP164
ARNT
TJP3
ZCCHC14
KIF16B
SRXN1
SWSAP1
BORCS7
PAK4
LTO1
UBOX5
FASTKD5
EPS15
SLC30A6
PDLIM7
SLC25A16
PIGBOS1
PIGB
AP3B1
BRAP
ACAD10
CLK3
SLC39A10
UEVLD
PDE4A
HPS1
CNOT3
CPPED1
CHST12
TIPARP
ISOC2
CCNT1
SPAG4
MEGF8
TAF1C
ADAD2
ZNF77
ZNF131
DDX17
LGR6
SYNJ2
OLFML2A
SMG8
HPS6
GLIS2
ALDH3B1
DIO1
CCDC22
CACNA1F
GTF2H5
SCGB1C2
SCGB1C1
CNN1
HNRNPA2B1
CBX3
F2
PRR5L
COMMD9
PPP6R1
ADGRG1
TIA1
RIOX1
ATF6
USP35
KCTD21
SRPK1
RABGGTA
CAVIN1
SRCIN1
SPATC1L
MKNK2
AKNA
ILF2
CASTOR1
SIRT4
SLC25A20
MEF2D
RAB2A
NEURL4
TCTN3
RPL6
NAE1
DCDC2
KIF2C
KDSR
MEGF9
EFR3A
UBXN4
LSM14B
COPS4
IRF2BP1
MRGBP
TCIRG1
LDLRAP1
FBXL19
ADGRL1
ETFB
FKBPL
ATF6B
TRIM26
NPAS4
CSF3R
SLC25A25
NAIF1
CLPP
RAPGEF1
RBM4B
DYNC2I1
UNC93B1
GPR160
ATP5MC1
RAB5C
PMEPA1
FMC1-LUC7L2
FMC1
ARPC3
PPP1R13L
POLR1G
GSN
PITPNA
ENSA
ZNF184
GSTA4
CLUAP1
C16orf90
GPR137
RAB11B
SCAMP4
ADAT3
PSMD4
DAGLB
SNU13
GADD45GIP1
PTPRA
LARP1
KANSL3
FER1L5
ATG4C
TP53I11
RHOD
KRT15
ICMT
STX6
TDRD7
RPS6
ARHGAP39
SCML1
ATP6V0E2
MLX
MRPL54
APBA3
NUP85
RPS29
DLAT
NELFCD
TIMM9
KIAA0586
TFAM
CHMP6
PRR30
PREB
WASF2
UBE2Q1
DIDO1
ZNF555
ERCC1
CTR9
TP53RK
SLC13A3
EMC4
NEK6
TMEM161A
AARSD1
SLC38A10
SLC27A4
LSP1
RPS12
ZNF234
MICALL2
ZNF687
TMC6
MATR3
SLC35A4
CYLD
APBB3
SYT11
GON4L
GALNT10
RABGEF1
GPSM2
ICAM1
TGM2
POFUT1
PLAGL2
TCF3
RAB14
TK1
AFMID
TRIM41
NCOA6
GRPEL2
RNF114
KANK2
HOOK1
KTN1
SEMA4B
LSM5
AVL9
KDM3B
ZNF500
BCL9L
BAD
XKR8
SREBF1
KAAG1
MCC
SYMPK
FOXA3
SYT7
TTC38
PKDREJ
ZFAND4
MFSD4B
TUFM
STK10
MEX3C
AKT2
CDON
DTD1
GRSF1
ALDH18A1
PRR5-ARHGAP8
PRR5
H6PD
PRRT3
HCAR3
EIF5A
C1orf198
WDR59
MDGA1
VPS37C
STX10
IER2
PDLIM1
GEMIN6
MTMR14
DHX16
TMEM214
TMEM107
KIFC3
TSACC
CCT3
RPL36
MTHFSD
ABRAXAS2
NEDD1
GK5
NUF2
PCCB
RASA4
WNT7B
HAS1
MANBAL
ST6GALNAC6
PPP2R2A
NEMF
RGL2
NCAM2
FBXO46
PDSS2
TAC4
DEF8
CYB5B
PARP2
TNS4
GNG7
PTK2B
NICN1
TSC1
IQCE
GFI1B
ZNF551
RIF1
ZSCAN25
KLF1
GCDH
HMGN4
IFNGR2
HES7
DPP9
TTYH3
HM13
SHFL
SPOCD1
SLC26A8
RPL37A
MAPK14
COX5A
SARS2
MRPS12
OR2T1
ZNF609
YPEL3
TBX6
CTDSP1
LZTS3
DPP3
PTPN1
GPR84
PITPNM1
RAB4B
MIA
EEF1AKMT1
SNRPC
RNF187
POLR2J3
PLD1
SEPTIN9
PPP1R9B
TMEM41A
PSMB3
PCGF2
GRK6
ZNF606
RNF213
KIAA0895
ACOT9
YEATS2
VKORC1
HAX1
TRAPPC6B
PNN
KLHDC9
BANP
EGR1
PRUNE1
MINDY1
SLC25A39
HEXB
ERICH4
DMAC2
ALOXE3
IER3
FLOT1
PHF23
GABARAP
ZNF713
CORO1C
USP45
ATP13A3
ADAM19
TIGD1
EIF4E2
ACTL6A
PPP6C
FOSL2
CNOT11
TPK1
SLC25A44
LIME1
BDH1
METRN
B4GAT1
RTKN
HUS1
INO80C
NUDT3
ZZEF1
CYB5D2
CBX1
RCC1
UROS
BCCIP
IL12RB1
ANLN
ATG9B
ABCB8
SUOX
SH3GLB2
MOSPD3
DAAM1
TRAF6
RAG1
TADA1
NUDT8
RS1
PPEF1
SLC27A1
ZBTB43
ADAMTSL5
SEPTIN7
VCL
STRBP
MTOR
PHLDA2
ECSIT
RAB8A
FUT10
PLXDC1
CENPN
ZBTB45
RBM12B
MARS1
ARHGAP9
TARS2
LOXL4
LIMK1
E2F6
CRYAA2
CRYAA
MELTF
USP42
MEMO1
LMTK3
ADPRHL1
FAM161B
COQ6
SPC24
RASA4B
LRP5L
ATP6V0E1
PGPEP1
COX16
TBC1D16
CAMK1
STARD13
NDUFAB1
WIPI2
PPIL3
NIF3L1
MAD2L1BP
ZBTB7B
ARID1A
TMEM51
HOMEZ
FCMR
FBXL18
CDT1
CDK9
ELAVL3
MNT
DHX15
FAIM
EBI3
CBX4
GABARAPL1
EPC2
SEC14L1
CDKN1A
MTRNR2L10
ZNF764
CKM
PPP1R9A
PKD2L2
SMN2
SMN1
RCN1
CERCAM
MAST3
MCM7
AP4M1
ASF1B
LMO7
EIF5A2
AP2S1
TMEM184A
PMM1
BCL9
SLC12A4
CIBAR2
HIBADH
DSN1
SH3PXD2B
MRPS17
UTP3
STARD3NL
RAB5B
GAMT
FABP1
NEK10
TOP1
ZNF443
POLDIP3
VARS1
SRC
TSNARE1
GGCX
BCAS1
MYNN
ACTRT3
SLX4IP
MKKS
GLIPR1L2
AHSG
SDAD1
TRIM32
RIN3
ASTN2
VAT1
RND2
FASN
EAPP
NOL10
PCBD2
TIMM10
EXD1
CHP1
TIMM17A
ARHGEF11
PHC2
OPA3
CLTB
TTI2
SLC44A1
SLURP1
EHF
NDE1
MARF1
TBRG4
CDK8
TMC8
METAP2
CWF19L2
DCUN1D2
BORCS6
BNIP5
ZNF771
IFNAR1
CLU
C16orf70
POLG
RPTN
PHF19
LRP5
SHISAL2A
FAM168B
DOLPP1
S1PR4
EIF2D
SCFD1
TPP2
SNX15
TM9SF4
EMILIN2
DCTN1
NOM1
MTBP
MRPL13
INTS5
DGAT2
BRMS1
RBM25
SLC31A1
PSMD3
FKBP15
SNUPN
CCDC42
NIPA1
MRPS23
LIMS1
NUDCD3
PFAS
MBD4
IFT122
CTC1
NSMCE1
AMOTL1
ZFAT
FAM89B
EHBP1L1
SLC35E2B
ZNF799
SEC13
NIPA2
ARFGEF2
RPL13
PPP6R3
INF2
NCOA7
PFN1
OGFOD1
NUDT21
STK4
FAM193B
C3
TCP11L1
RPL35A
IQCG
POLR3E
PDE6B
LY6G6F-LY6G6D
LY6G6F
ABHD16A
PNPLA6
ARHGAP35
TADA3
ARPC4-TTLL3
ARPC4
BAIAP2
TEAD1
CIZ1
ZNF572
RNF207
FEM1A
LACTBL1
SLC66A3
PISD
NIBAN2
MOK
TGFB1I1
IL1RAP
METTL3
ID1
ATE1
EFNA4
DENR
VPS13B
RUNX3
KDM3A
LAPTM5
KATNIP
GTPBP2
GTF3C1
TIMM22
PTPN3
ITGB3BP