ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15039986 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◣ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L8
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L9
RGPD2
RGPD1
ZFP36L1
TIPARP
VPS37D
SNX16
CCDC200
SORBS1
UEVLD
TOR1A
GTF2H4
TOP1
AHCY
DUX4
TP53I11
PRRT3
ZDHHC12
MRPL39
GADD45B
NLRX1
AP2A2
SLC25A16
MRPL45
WDR74
SGSM1
EIF3C
EIF3CL
DCDC2
KAAG1
SOGA1
PMF1-BGLAP
PMF1
MTHFSD
SLC29A3
MLLT1
RNF24
ZCCHC14
SRXN1
DTD1
ZNF335
C1orf198
TCTN3
LTO1
PRR5L
COMMD9
MYNN
ACTRT3
NCAM2
KIF16B
EI24
UBFD1
EARS2
RFX1
SWSAP1
SLC35B1
OSCAR
NDUFA3
UBE2V2
SIRT5
ZER1
DPP9
KXD1
B4GAT1
BRMS1
HPS6
GSTA4
KCNK5
CHST12
UBE2L3
HPS1
SLC25A20
CEP164
CYRIB
CABLES2
ILDR1
ARPC3
ZBTB3
RAPGEF1
HOOK1
RPS29
ACOT9
CLPB
TAF1C
ADAD2
MKNK2
MT1M
MT1E
TTYH3
C8orf37
PDCL
SRPK1
TMC6
PPP6R3
LTA4H
CNOT3
TERF2
SRCIN1
NEK7
CCNT1
DRG2
GPR160
VKORC1
METAP2
C15orf48
RAB5C
EFR3A
ATP2C2
UBOX5
FASTKD5
CLK3
PIGBOS1
PIGB
GTF2H5
FRG2C
NEMF
TNS4
SPAG4
ENSA
BNIP5
RRBP1
BRAP
ACAD10
ILF2
SLC27A4
DHX16
RIOX1
RASAL3
COASY
ADRM1
IFNGR2
MELTF
NUMA1
LRTOMT
GPCPD1
ATP5MC1
ABHD3
TSACC
CCT3
RHNO1
FOXM1
PIH1D1
ALDH16A1
INF2
RAB15
PSMD9
HPD
OSGIN1
HMGN4
TSPAN10
NPLOC4
SPIRE2
ARHGEF1
SEC22B
TFAM
PRMT5
SMCO4
CCDC107
ZNF638
STX16
RABL3
GTF2E1
RAC1
ROM1
EML3
METTL14
KTN1
ITGA3
SPATS2
KRTAP10-4
YEATS2
BORCS6
NUP85
COPS4
FBXL18
C3orf33
KIAA0513
ZNF639
FAM161B
COQ6
FABP6
NUCKS1
FOXK2
EPS15
TK1
AFMID
VCL
MANBAL
PARL
DEF8
HEXIM1
ASPSCR1
FBXO43
MAFA
SMG8
TRIM41
PISD
HSPA6
MUC1
NRXN2
SLC38A10
NMRAL1
HMOX2
UIMC1
ATF6
POP5
ACTL6A
UBE2I
ABCA1
ZFAND4
ARNT
RAB2A
TMEM44
EXD1
CHP1
GTF2A2
DYM
SPAAR
MAMDC2
MUC3A
GBA
FRG2
NR6A1
SMARCD2
LPIN1
CCIN
PRMT1
COL23A1
C1QTNF8
CACTIN
FXN
ATG16L1
PAXBP1
CDK12
SPATA2
ZDHHC24
ACTN3
TRMT1
NACC1
C19orf25
UBE4A
TRMT10A
MTTP
TBC1D4
TKT
GOLM2
PSMB6
HLA-E
SETD1A
WDR43
SRRD
HPS4
PLIN3
AARS2
RNF216
PTPRF
TFB1M
TJP3
TRIM48
SPHK2
RPL18
FAM83E
BORCS7
SMU1
PAK4
FBXW5
C8G
SLC30A6
PDLIM7
STOML2
AP3B1
SLC39A10
CDC25B
PDE4A
CPPED1
RXRA
ISOC2
MEGF8
ZNF77
ZNF131
DDX17
LGR6
SYNJ2
NDUFS7
OLFML2A
GLIS2
SLC35E2A
ALDH3B1
DIO1
MED23
CCDC22
CACNA1F
SCGB1C2
SCGB1C1
CNN1
CLIC3
PIGO
SH2B1
HNRNPA2B1
CBX3
F2
PPP6R1
ADGRG1
TIA1
SLC39A11
PSCA
USP35
KCTD21
RABGGTA
CAVIN1
TENT2
MRPL35
IMMT
ZMAT2
RIN2
RPS14
TESK1
SPATC1L
AKNA
CASTOR1
SIRT4
RASA2
MEF2D
CLTA
NEURL4
RPL6
NAE1
KIF2C
KDSR
MEGF9
LUC7L2
UBXN4
LSM14B
IRF2BP1
MVB12A
MRGBP
TCIRG1
LDLRAP1
FBXL19
ADGRL1
UTP25
ETFB
FKBPL
ATF6B
TRIM26
SP2
NPAS4
CSF3R
SLC25A25
NAIF1
CLPP
MELK
RBM4B
DYNC2I1
UNC93B1
ZFAND1
SPAG8
HINT2
YWHAG
PMEPA1
FMC1-LUC7L2
FMC1
RBM39
PPP1R13L
POLR1G
GSN
PITPNA
ZNF184
TEF
ENGASE
CLUAP1
C16orf90
CETP
NUDT9
GPR137
RAB11B
SCAMP4
ADAT3
PSMD4
DAGLB
SNU13
GADD45GIP1
PTPRA
TOMM7
LARP1
KANSL3
FER1L5
ADNP
ATG4C
RHOD
MRFAP1L1
KRT15
ICMT
STX6
DOT1L
TDRD7
RPS6
ARHGAP39
SCML1
ATP6V0E2
MLX
PPP5D1
CALM3
MRPL54
APBA3
DLAT
NELFCD
TIMM9
KIAA0586
CHMP6
PRR30
PREB
WASF2
UBE2Q1
DIDO1
MSMP
EPRS1
ZNF555
ERCC1
TRIOBP
CTR9
TP53RK
SLC13A3
EMC4
PDCL3
NEK6
TMEM161A
AARSD1
LSP1
RPS12
PHKB
ITFG1
ZNF234
MICALL2
ZNF687
MATR3
SLC35A4
CYLD
APBB3
SYT11
GON4L
GALNT10
RABGEF1
CTNNBL1
LFNG
GPSM2
PRELID2
ICAM1
TGM2
POFUT1
PLAGL2
TCF3
RAB14
NCOA6
GRPEL2
PRPSAP1
RNF114
KANK2
TLN1
CREB3
SEMA4B
LSM5
AVL9
KDM3B
HRCT1
ZNF500
BCL9L
BAD
XKR8
SREBF1
RUSC2
MCC
SYMPK
FOXA3
SYT7
TTC38
PKDREJ
PLEKHG2
MFSD4B
TUFM
SIT1
STK10
MEX3C
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
AKT2
CDON
GRSF1
ALDH18A1
PRR5-ARHGAP8
PRR5
H6PD
GNE
PEX3
ADAT2
ZCCHC4
HCAR3
EIF5A
WDR59
MDGA1
LOC730098
CCL27
ARHGEF39
SSBP1
VPS37C
STX10
IER2
PDLIM1
GEMIN6
MTMR14
COMMD2
TMEM214
TMEM107
KIFC3
RPL36
ABRAXAS2
NEDD1
GK5
NUF2
MRFAP1
PCCB
RASA4
WNT7B
HAS1
ST6GALNAC6
PPP2R2A
DPH5
RGL2
FBXO46
PDSS2
TAC4
LRRC37A3
DNAJC19
CYB5B
PARP2
GNG7
PTK2B
NICN1
ZNHIT6
TSC1
IQCE
GFI1B
TRIM55
ZNF551
RIF1
ZSCAN25
KLF1
GCDH
HES7
HM13
SHFL
RBBP5
SPOCD1
SLC26A8
RPL37A
MAPK14
TRIP4
MRPL38
COX5A
SARS2
MRPS12
OR2T1
ZNF609
YPEL3
TBX6
CTDSP1
LZTS3
CDK5RAP1
AKIRIN2
NCOA5
DPP3
PTPN1
GPR84
PITPNM1
RAB4B
MIA
EEF1AKMT1
SNRPC
RNF187
POLR2J3
PLD1
SEPTIN9
DNM2
PPP1R9B
TMEM41A
PSMB3
PCGF2
GRK6
ZNF606
RNF213
RPL27
FKTN
CRLS1
KIAA0895
ZBTB40
ATP5PD
EED
HAX1
TRAPPC6B
PNN
KLHDC9
NUDT2
KIF24
BANP
EGR1
CCNC
PRUNE1
MINDY1
SLC25A39
HEXB
ERICH4
DMAC2
ALOXE3
IER3
FLOT1
PHF23
GABARAP
ZNF713
CORO1C
USP45
GTF3C3
ATP13A3
ADAM19
TIGD1
EIF4E2
PPP6C
FOSL2
CNOT11
TPM2
AURKAIP1
TPK1
SLC25A44
LIME1
BDH1
METRN
RTKN
HUS1
INO80C
SLC9A1
NUDT3
FANCG
H4C3
H1-6
ZZEF1
CYB5D2
CBX1
RCC1
UROS
BCCIP
IL12RB1
ANLN
ATG9B
ABCB8
SUOX
SH3GLB2
MOSPD3
DAAM1
TRAF6
RAG1
TADA1
NUDT8
RS1
PPEF1
DMAP1
SLC27A1
ZBTB43
ADAMTSL5
SEPTIN7
STRBP
MTOR
PHLDA2
ECSIT
RAB8A
PSMF1
FUT10
PLXDC1
CENPN
ZBTB45
RBM12B
MARS1
ARHGAP9
HIBCH
TARS2
LOXL4
LIMK1
E2F6
CRYAA2
CRYAA
USP42
STAT3
MEMO1
LMTK3
ADPRHL1
SPC24
RASA4B
IL11RA
LRP5L
ATP6V0E1
AMZ2
PGPEP1
COX16
TBC1D16
CAMK1
STARD13
NDUFAB1
WIPI2
TMEM242
PPIL3
NIF3L1
MAD2L1BP
ZBTB7B
ARID1A
TMEM51
HOMEZ
FCMR
CDT1
CDK9
ELAVL3
UBE2F
TACO1
MNT
MRPL44
DHX15
FAIM
EBI3
CBX4
GABARAPL1
EPC2
SEC14L1
CDKN1A
MTRNR2L10
ZNF764
CKM
C9orf131
PPP1R9A
PKD2L2
SMN2
SMN1
RPP25L
RCN1
CERCAM
MAST3
MCM7
AP4M1
ASF1B
LMO7
EIF5A2
AP2S1
TMEM184A
PMM1
BCL9
SLC12A4
DPY19L4
CIBAR2
HIBADH
DSN1
SH3PXD2B
MRPS17
UTP3
STARD3NL
RAB5B
GAMT
FABP1
NEK10
ZNF443
RPS7
POLDIP3
VARS1
SRC
TSNARE1
GGCX
PDE4DIP
BCAS1
SLX4IP
MKKS
GLIPR1L2
AHSG
SDAD1
TRIM32
RIN3
ASTN2
VAT1
RND2
PANK3
FASN
EAPP
NOL10
PCBD2
TIMM10
TIMM17A
ARHGEF11
PHC2
OPA3
CLTB
ASXL1
RAD52
TTI2
SLC44A1
SLURP1
EHF
NDE1
MARF1
TBRG4
CDK8
TMC8
CWF19L2
EIF3E
NPR2
DCUN1D2
ATP5MC3
ALG10B
ZNF771
IFNAR1
CLU
C16orf70
POLG
RPTN
PHF19
LRP5
SHISAL2A
DDX18
TEX46
KDM1A
FAM168B
DOLPP1
S1PR4
EIF2D
SCFD1
TPP2
SNX15
TM9SF4
NUTM1
NOP10
EMILIN2
DCTN1
NOM1
MTBP
MRPL13
INTS5
DGAT2
PECAM1
RBM25
ELP3
SLC31A1
PSMD3
FKBP15
SNUPN
CCDC42
NIPA1
MRPS23
LIMS1
NUDCD3
PFAS
MBD4
IFT122
CTC1
NSMCE1
AMOTL1
ZFAT
REXO4
FAM89B
EHBP1L1
ADAMTS13
SLC35E2B
ZNF799
SEC13
NIPA2
ARFGEF2
RPL13
NCOA7
PFN1
OGFOD1
NUDT21
STK4
FAM193B
C3
TCP11L1
SMG5
GORASP2
RPL35A
IQCG
DSTYK
ATR
POLR3E
PDE6B
RMND1
LY6G6F-LY6G6D
LY6G6F
ARMT1
ABHD16A
PNPLA6
ARHGAP35
TADA3
ARPC4-TTLL3
ARPC4
BAIAP2
TEAD1
CIZ1
ZNF572
TMEM79
RNF207
EIF3D
FEM1A
LACTBL1
SLC66A3
SF3A3
NIBAN2
MOK
TGFB1I1
MTF2
IL1RAP
METTL3
ID1
ATE1
RPL38
EFNA4
DENR
VPS13B
RUNX3
KDM3A
LAPTM5
KATNIP
GTPBP2
GTF3C1
TIMM22
PTPN3
ITGB3BP
EFCAB7
STXBP3
GABPB2
PKN3
SYNGR2
TSTD3
CYP2R1
USP36
SLC13A5
SLC29A2
ZNF582
BBC3
APC2
TBC1D19
DCT
TRIM59
PYY
NAGS
KIF3B
EMC8
COX4I1
COQ7
SERPINA1
RIPOR3
ANXA2
ZKSCAN2
SAMD8
RRP1
DUSP13
C16orf95
MRPS14
UQCC1
RPN2
MROH8
REXO5
ERI2
TSKS
TMEM259
AP2A1
POLG2
RGP1
GBA2
ZNF579
RFX7
FCHO1
TBPL1
NDUFB4
LTBR
DUSP1
FBXO11
ASGR1
ZNRD2
TMEM19
MRI1
ARAF
RPS10-NUDT3
RPS10
CEP78
DDHD2
LOC100509620
FLCN
SEC14L4
PYCR1
H4C8
POLR3H
PGC
EIF1AD