ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20113819 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◣ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

FRG2C
MTRNR2L1
DUX4
FRG2
PGK1
CCDC200
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
COL23A1
NOTCH2
ZNF410
GARS1
ITGB3BP
EFCAB7
CCZ1B
TFIP11
SLC25A51
TSN
GMFB
DNAJC9
NME1
MKRN2OS
MKRN2
NBN
INTS1
COX16
LRRC46
MNAT1
MPP5
LRP6
DCP1A
ATL2
ATG14
BOLA3
MRPS23
TOM1
MRPL40
HIRA
DHX40
WASHC2A
ERLIN2
DCP1B
ZFAT
ZNF35
WASHC5
NSMCE2
MRPL38
NPAS4
DNAAF2
TRUB2
COQ4
RAD51AP1
C12orf4
RBAK-RBAKDN
RBAK
EXD2
ASXL1
RCOR3
METTL2A
ZSCAN22
RNF135
APTX
NOL11
DNAJA1
CIPC
TRIM37
ZMPSTE24
ADK
ANGEL1
DYRK4
SRSF11
SNRPE
MAPK1IP1L
PHF3
FITM2
LRRC37A3
UTP3
ADIPOR2
PSMD3
ARL8B
XKR9
LACTB2
SUGCT
MPLKIP
LANCL2
PPP4R3B
HAGH
FAHD1
SASS6
P4HA1
FRA10AC1
ZNF451
SMIM10L1
PRH1-TAS2R14
PRH1
ETNK1
NRAS
INKA2
DDX20
ZNF384
TMEM199
POLDIP2
NUDT1
MRM2
DNM1L
ATAD2
CCDC57
DDX1
PEX3
ADAT2
EIF2S1
ATP6V1D
MAD1L1
ZNF34
EIF2B5
MRPS35
RHNO1
FOXM1
SMN2
SMN1
PPM1D
YBEY
MCM3AP
TEFM
PCNX4
RTN1
NOLC1
MIS18BP1
EIF2D
PIGF
CRIPT
RPS29
DBNL
LRR1
KIFBP
REXO2
CASC3
STXBP3
PFKM
SENP1
CGRRF1
MFSD14A
RTL10
GNB1L
TOMM20L
SEC14L1
DEPTOR
SLC39A13
HS1BP3
PSMG2
CEP76
NDRG1
ERLIN1
STRADA
SIK2
AGL
SERP1
EIF2A
TULP3
ATP5MC2
RPS6
TRMT5
SLC38A6
TFAM
AFF4
PPIH
IQCH
AAGAB
SPAST
TPR
ODR4
ZNF487
RABL2A
CDKN1B
KIAA0895
TMED5
CCDC18
THOC6
HCFC1R1
TNFRSF12A
IPO13
ERGIC2
TMEM184A
SNRPD3
GUCD1
ABCA5
NCOA7
UTP20
CRNKL1
CFAP61
NUF2
FBXO5
HTR5A
MTFR2
QTRT1
FAM72C
IQGAP3
METAP1D
FAM72A
SGO1
WDR74
CCNG2
FAM72D
CCNA2
TRMT1
NACC1
FAM72B
FANCD2
BIRC5
METTL1
EEF1AKMT3
CYP27B1
RRP15
NCAPH
UTP25
SCFD2
SMYD5
WDR4
UNG
ALKBH2
CCDC86
SLC12A9
RRP12
RRM2
CCNB1
C16orf71
ANKS3
RABL2B
RAD51
NAGPA
WASHC2C
EXO1
BCAS3
CCT2
C12orf66
AURKB
KIF18B
SNX16
KIF20A
BRD8
URB1
CDC25A
RBM19
CKAP2L
ZFPL1
CDCA5
GRWD1
DZIP3
CIP2A
IPO4
CCNB2
SKA3
MRPL57
TMEM262
TTC27
NEIL3
POLR2J3
VPS33A
KLHL18
KIF9
DHX37
BRI3BP
FBXW9
MCM7
AP4M1
SLX1B
SLX1A
BOLA2B
BOLA2
BLM
LTV1
CDK7
ESCO2
CCDC25
SUMF1
FANCI
NEK2
MAMDC2
PSME3
MAD2L1
SHCBP1
NOL6
BOLA2-SMG1P6
NUP214
HEXA
XKR7
XRCC2
MTRNR2L2
MSH3
DHFR
NOL8
CENPP
TTK
MOK
EDC3
CYB5R4
RAD54L
TRIP13
BRD9
SKA1
KPNA2
GTF2H3
EIF2B1
C16orf46
ACOX3
EBNA1BP2
CFAP57
CEP135
DPH1
TICRR
ANGPTL6
TRMT6
MCM8
TMEM186
PMM2
RTN4RL1
SHC1
CKS1B
NLE1
NAT10
EXOSC5
BCKDHA
PPAN-P2RY11
PPAN
MIS18A
SPNS1
MRPL27
EME1
NBPF1
VARS1
GPATCH4
BUB1B
KIF15
KIAA1143
TBRG4
DYNC2I1
SULT1A4
SULT1A3
IQSEC3
POLQ
SPATA25
CTSA
NUDT15
ATP6V0D1
AGRP
ACTR6
RNF166
NEURL2
TTF2
GTF3C4
DDX31
KIF2C
SMC2
TMEM248
RNF40
CCDC189
NDUFAF6
TROAP
TRIP4
PIGU
KNOP1
POLR1B
HMGB1
DLGAP5
UFD1
CDC45
SPCS1
GLT8D1
ANLN
CTU2
USP2
UBFD1
EARS2
NOP16
HIGD2A
CCNE2
KCTD9
CDCA2
NUDT2
KIF24
PMS2
AIMP2
PDE4DIP
MCM10
HCFC2
GLT8D2
HEATR1
SLC25A26
PRCP
DDIAS
HEATR6
LYRM4
FARS2
VTA1
NMBR
UBXN11
NOL7
SUPV3L1
CPLX2
POU2F1
POLR3D
KIF23
KIFC1
RPP40
CENPW
MUC3A
PLK4
KLF1
CDK1
PSMD6
POC5
GBA
GCDH
LRRC29
PBK
CDC20
PNO1
COMMD9
DYRK1B
DNAJC25-GNG10
DNAJC25
URB2
TAF5L
TUBD1
RPS6KB1
ZNF778
ATR
WDR46
PFDN6
GTSE1
PUM3
SGO2
DUS2
DDX28
TAF13
GPATCH3
EPN1
CYB561D1
UBE2C
ATP6V0B
ASPM
TFB2M
CNST
DDX11
CDC6
CSTF1
AURKA
SECISBP2
DDX49
COPE
CCDC115
EIF3C
MDN1
DDX21
PCOTH
MIPEP
ZNF497
ODF2
MTRNR2L8
DIMT1
TDRD7
RNASEH1
UTP4
DERPC
CHTF8
FAM227B
DTWD1
EIF3CL
SHQ1
TADA2B
CCDC96
CBWD5
INTS7
DTL
MAK16
MRTO4
EMC1
IPO11
RDH5
BLOC1S1
TRMT61A
DDX19A
COG7
TTC26
WFDC3
DNTTIP1
IMP4
PNPT1
IREB2
WIPI1
TRMT61B
BUB1
ITGA7
WDR62
THAP8
PUS1
MCOLN1
HM13
LSM12
G6PC3
VAC14
ZNF331
GATB
RBM28
CBWD3
TTLL9
SRPRB
GFM1
PBRM1
GNL3
RRS1
ADHFE1
RTBDN
UTP15
ANKRA2
C6orf89
C5orf51
LOC101928764
LAMP1
CREBRF
TRIAP1
ZGRF1
LARP7
ARMC2
FBXL13
ARMC10
CEP55
MND1
RTTN
RNF187
THOC3
ZFYVE1
TRMO
TRIP12
PGBD5
FBXO36
TRAPPC6A
BLOC1S3
PWP1
LSM5
CENPS-CORT
CENPS
KNL1
DIAPH3
BRCA1
MRM3
GLOD4
NOL10
ZNF688
MFSD1
TSFM
PAXBP1
PPRC1
NAGK
KAT2B
IARS1
KDM5B
TTLL11
DCLRE1B
AP4B1
PINX1
DYNLRB2
CDC25C
DPH2
KLHDC4
OGDH
CEP43
RBKS
BABAM2
HSPA9
DYNLL1
MARCHF8
NPM1
SNRPD1
BBS5
ECSIT
THADA
DHODH
ENDOV
PRMT2
TWNK
MRPL43
GSN
OIP5
NUSAP1
XRN2
STIL
FDX2
FARSB
SYNJ1
USP32
NKX1-1
MAPK8IP2
SSBP1
TSEN54
CASKIN2
CFAP298-TCP10L
CFAP298
DDX42
CCDC47
PRMT1
RAD18
AVL9
QTRT2
CCDC191
CLSPN
MRPL3
LIN28A
CRBN
TASOR2
TOMM40
NEMP1
ANAPC10
ABCE1
E2F3
VRK1
CBWD6
RAB14
CFAP410
YARS1
S100PBP
WDR36
GTPBP4
COMMD4
BARHL1
HMGB2
TTLL4
POLR3F
DZANK1
CCDC146
RCL1
SETD4
VPS50
HEPACAM2
DUS3L
CDCA8
C1orf109
PSMD9
HPD
ZBTB9
AEN
RFC3
RUVBL1
LRRC59
PCNA
MVK
CAMTA1
INSM2
NRL
STK11IP
RIOK1
CAGE1
PPIL2
AP5Z1
IFT57
AGFG2
NDUFS7
CENPN
ZAR1L
BRCA2
MARS2
NOC4L
DDX51
SUGP2
ARMC6
USP30
AXDND1
ASF1B
NTAQ1
ZSWIM8
CHCHD1
TSR3
RPUSD4
GNPTG
FAM118B
INO80
RPIA
HIPK1
FAM200B
MMUT
CENPQ
RRP1
RTEL1
SECISBP2L
ADPRS
RTF2
UBA52
STMN3
MRM1
PISD
MRPL4
ARFGEF2
PARPBP
NUP37
CDC37
MKI67
L1CAM
TDG
STYXL1
MDH2
C8orf33
TAF4B
TEKT2
ATP6V1C1
MPHOSPH10
MCEE
CPEB4
LARP4
FAM186A
FBXO32
HSDL1
DNAAF1
CKS2
TFPT
PRPF31
HSP90AB1
HSPBP1
BRSK1
GNL2
ESPL1
GMNN
TSEN2
TIPARP
NUP107
CENPM
PDE8A
TOMM22
GLRX5
ZSWIM9
LIG1
SLC37A1
SKA2
PRR11
GTPBP10
EEF1E1
ZBTB17
LTN1
RPSA
PDXDC1
ABCF1
CCDC77
SLC39A6
ELP2
TIMELESS
UBN2
UTP23
DHX33
NBPF15
CWC25
KLHL32
MEA1
MED20
BYSL
DNA2
C12orf45
PARD6B
VPS35
NUP35
GAR1
SOD2
RNMT
FAM210A
ZNF593
C1orf232
MTR
SKIV2L
NELFE
H4C14
FBXW8
REXO4
ADAMTS13
SSNA1
ANAPC2
PTRHD1
CENPO
FAM174A
PRKAR1B
OXNAD1
DPH3
PPT1
ARID3B
ADAT1
DNAH7
SAR1B
YDJC
CFAP299
CCDC116
NET1
WDR43
LAP3
IQCG
TXNL4A
SLC35A4
APBB3
DCAF11
PHB2
SDAD1
PFDN4
SLF2
PPIL1
XPO5
POLH
AP3D1
TMEM231
TIMM23
FAM187A
EFTUD2
CCDC103
POMZP3
LARS2
CELSR3
PACRGL
TIMM23B
PARG
REXO5
ERI2
ADPGK
WDR61
TEX14
RAD51C
SRD5A1
NSUN2
STX18
ZBTB49
LYAR
STAM2
TOR1A
PWP2
LOC102724159
ASNS
WDHD1
SOCS4
KIF14
METTL3
GDAP1
DHDDS
ZNF202
TXLNA
COPS7B
PALB2
DCTN5
FKBP3
FANCM
SLC35C2
PLK1
PC
NGLY1
ZNF529
ARHGAP11A-SCG5
ARHGAP11A
LSG1
RBM48
PEX1
CLTC
BRIP1
CNPY3
NEU1
SPG21
CFDP1
APPBP2
CARS1
ATP6V1H
SF3A3
STAT1
DDX18
POLR1F
SPC25
SUPT7L
SLC4A1AP
RSPH1
TTC7A
MCFD2
COX14
CNOT4
STAT3
LAMTOR5
NCLN
HSPH1
NDUFS3
KBTBD4
RPF2
TOM1L2
DRC3
WDR81
EIF2B3
E2F8
HASPIN
SARS1
TMEM242
CRCP
TCTN2
ASH1L
LRP2BP
ANKRD37
SPTLC1
WDR3
GDAP2
EBAG9
SPATC1L
KLHL12
SNAPC5
RAD9A
EIF4H
SLC25A32
DCAF13
NCL
UBIAD1
FKBP1A
STX16
NOB1
NUDCD3
CENPF
DBF4B
TMEM150A
WDR53
FBXO45
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
YIPF3
POLR1C
ZNF718
KTI12
MAP3K7
TSGA10
CDK5RAP1
SPRYD4
SLF1
KIAA0825
KDM5A
SMC4
IFT80
RIOK3
PABPC1
INTS12
GSTCD
TBL3
BRIX1
PEPD
TRIT1
NHP2
BZW2
RAD54B
CEP162
RPL6
CLUAP1
H4C15
THAP5
DNAJB9
RRP9
PARP3
SLC25A46
PPIL4
DIABLO
RECQL
GOLT1B
B3GAT3
SETD6
MYBL2
ANKMY2
WDR27
C6orf120
ZHX1-C8orf76
ZHX1
ING5
RSL1D1
EIF1AD
BANF1
TFAP4
NDUFAF5
ESF1
CMSS1
AATF
CACTIN
MRPL21
IGHMBP2
FAF1
UBE2Q1
SAP30
TTC23L
AP3M1
MRPL1
PES1
UBE3D
DOP1A
POLR3B
DSCC1
C16orf90
TTC4
MTCH2
CSNK1G1
RHEBL1
COG2
PARL
L3HYPDH
JKAMP
NCBP2AS2
NCBP2
PAK1IP1