ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089511 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◣ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
PSMD6
MAMDC2
TRIM37
PFDN4
TUBD1
RPS6KB1
PARD6B
ZNF217
TEX14
RAD51C
NPAS4
NCOA3
APPBP2
USP32
PPM1D
BCAS4
BRIP1
CREBRF
IQGAP3
DYNLRB2
CRBN
DHX40
BMP7
HIPK1
YPEL2
PPM1E
UNG
ALKBH2
C3orf14
ARFGEF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQSEC3
RNFT1
DCLRE1B
AP4B1
FBXO32
NBPF15
TBX2
ZFYVE1
SIKE1
RRP1
SMG8
SCRT1
BARHL1
METTL1
EEF1AKMT3
CYP27B1
SKA3
MRPL57
HTR5A
MOK
ZC3H18
MYO5C
WASHC5
NSMCE2
EPN1
PHTF1
DYRK1B
SGO1
AP4E1
KPNA2
NOTCH2
RABL2A
C12orf66
TRIM33
UTP20
RRP15
CCNA2
TTF2
NTAQ1
TMOD3
ZEB1
POLQ
FAM214A
TPRN
TMEM203
NDOR1
NUDT4B
NUDT4
TPTE
PDE4DIP
PTRHD1
CENPO
RACGAP1
DZIP3
CIP2A
UBE2C
MBTPS1
CYB561D1
ATXN7
ESPL1
XKR7
SUMF1
EIF2D
KLHDC4
SLC45A3
SUPT4H1
PIAS3
LYSMD2
TMOD2
TICRR
ASB8
CCDC200
HEATR5A
GABARAPL2
GREB1
ZNF331
CKAP2L
DDX49
COPE
NET1
ABCA5
L1CAM
PIP4P2
NEIL3
NCKAP5L
FAM72B
ZHX3
ARSG
SLC16A6
NDUFAF6
CCNE2
TROAP
RIPK2
THOC7
C16orf71
ANKS3
C16orf46
ATP6V1C1
FANCD2
VANGL1
FAM72C
FAM72D
OAZ3
NUB1
BCAS1
SAP30BP
RECQL5
SLC25A19
DNAH7
ATG101
KLHL24
RMDN1
PRELID3B
CPNE3
NCAPH
FANCI
SPEF2
ATG14
HSDL1
DNAAF1
QSOX2
LIX1L
PRMT6
ATP1A1
ATAD2
LATS2
LRRC29
RAB22A
MKI67
MRPS23
NEMP1
DSCC1
NBPF1
MUC3A
NRAS
CSRNP2
FAM72A
TBC1D30
GNS
GFPT1
CFAP69
SPAG1
TP53INP1
ZSCAN2
P2RY2
RUVBL1
MED13
TANC2
SULF2
GFOD2
KCNH6
CPLX2
STYXL1
MDH2
CDC14B
AKAP1
PHLPP2
RASA2
STX5
CNPY3
WASHC2A
RNF166
CTU2
NXF1
TTC27
MAPK8IP2
HSF1
BOP1
TSFM
KLHL36
DEPDC1B
SLC12A9
TASOR2
PPP1R12B
SLC25A24
SKA2
PRR11
TSEN2
NBN
ZDHHC17
SLITRK3
TTLL11
PLK1
AZIN1
CCT2
MIS18A
TRUB2
COQ4
CSTF1
AURKA
GNAI3
GPSM2
ZFPL1
CDCA5
TMEM262
LOC101928764
TSR3
GNPTG
RECQL4
LRRC14
TCP11L1
ZMYND8
TRIP13
BRD9
ATXN1L
PRKCA
FAM227B
DTWD1
METTL2B
DECR1
RNF40
CCDC189
TNPO1
GTF2H3
EIF2B1
PGBD5
USP30
KIF14
CCT5
ATPSCKMT
RABL2B
TRMT61A
HM13
TCTN2
SERINC3
GPR89B
C7orf50
CSDE1
PRDX6
DMXL2
CEP128
SLC22A15
TBC1D13
GABPB1
BICDL1
HELZ
MCM7
AP4M1
SPATA25
CTSA
NEURL2
CENPBD1
CDKL1
DLST
NAGPA
CKS2
PRPF19
CHD1
DYNC2I1
TMEM39A
HYOU1
SEC22A
NTNG1
BIRC5
REXO4
ADAMTS13
NUDT1
MRM2
RBSN
PPP1R16A
FOXH1
H3-3B
PREX1
CLTC
SARS1
JAGN1
TFF1
POLR2J3
RAE1
DENND2C
KLHL32
FBXW8
NDUFV1
NDUFAF4
SLC35B1
INTS1
LTV1
RABIF
ECT2
RHEBL1
CNOT2
RRP12
BLM
EDC3
C8orf33
CPEB4
AOPEP
GGH
PRKAR1A
PRPF18
CYB561
MRPL4
STRIP1
OXR1
ZDHHC23
RMND5B
RHNO1
FOXM1
BRD3OS
MYL12B
MYO5A
CACNG4
TMEM231
C1orf54
APH1A
PTPN1
LRFN4
PUS7
GNA13
LEO1
DHX37
BRI3BP
MFN1
SPATA2
ADIPOR1
BCAS2
FAM210B
PWP2
LOC102724159
TRIM48
BUB1
TRIAP1
SLF2
MOCS3
DPM1
CCDC88A
DSTYK
RNF114
PRC1
PIP4K2C
ZER1
DYNLL2
CYP24A1
WASHC2C
SLC35C2
SEL1L
NAA25
C1QBP
HAUS7
NUP160
SWI5
GOLGA2
CDT1
TEX2
GMPS
CCDC86
EXO1
TSEN54
CASKIN2
LARP4
FAM186A
SKIV2L
NELFE
SPTLC1
TCTEX1D2
PSRC1
STXBP3
ABTB1
HCFC2
GLT8D2
QTRT2
CCDC191
GPR146
KCND3
MMUT
CENPQ
SPPL2A
ATL2
E2F7
CA2
CCNG2
DUS2
DDX28
CDC25B
FBXO33
ING4
SLC27A2
DLGAP5
SPC25
ZMAT3
TADA2B
CCDC96
KAT2B
MAPK6
ANKRD46
HABP4
FKBP4
GTSE1
TMEM249
SLC52A2
FBXL6
CHFR
SPG7
MXD4
WIPI2
KIF6
ARMC2
ERN1
RHEB
SNX16
DNAJC25-GNG10
DNAJC25
PDCD2
XPO4
SUSD6
MACROD2
SEL1L2
IPO11
TACO1
RAB5B
SPOP
GAL3ST3
SF3B2
TBC1D23
PTBP3
TADA1
PMEL
CDK2
SIRT7
NEK2
KLF1
GCDH
WFDC3
DNTTIP1
NUP107
URM1
GKAP1
SORT1
CCNB1
COL23A1
RPP40
RXYLT1
MAX
RTKN2
SLC25A13
PCNX3
MAP3K11
KAT7
PDIA5
CEP112
IPO4
GPR89A
UBE2G2
PLEKHM1
SMIM5
DIAPH3
VRK1
FAM207A
VSIG10
KIFC1
SFSWAP
METTL2A
LOC100289561
ATG7
AMZ2
DNM1L
MFSD14C
XRCC2
DHODH
SLC37A1
GTPBP10
RSPH1
RAD54B
EIF1AD
BANF1
TMEM18
POLL
DPCD
TRPM7
EMSY
WWP1
PUS1
PDSS1
VCPKMT
SNAPC4
EXOC6
CDCA4
MTFR2
POC5
TTLL4
KANSL2
PPP2R5C
LMBR1
C20orf27
AJUBA
IQSEC1
RECQL
GOLT1B
CRELD1
TAX1BP1
WDR25
WARS1
DGKE
C17orf67
SEC62
KLHL18
KIF9
LRRC59
TXNL4A
RBFA
HSPA5
TDRKH
G2E3
DDX23
ERCC3
NFATC3
PIK3R4
VAC14
TCF19
CCHCR1
C7orf26
FBXO28
USP8
HECTD4
RRM2
CENPW
SGO2
RTF2
PCNP
LLGL2
KIF18B
UTP23
CLCC1
FRAT1
EDC4
PSMD4
USP10
NPHP3
TPR
ODR4
OTULIN
VAMP3
SLC46A1
CDK1
PBK
TSN
UBE3B
KCTD10
FBXL3
ENTPD5
BBOF1
NDE1
ANKRD28
MARF1
PPM1F
NFATC2
SH3BP5
HEATR1
ZHX1-C8orf76
ZHX1
USP35
KCTD21
LOC112694756
ATP5F1E
NOM1
TMEM120B
PCBP2
SURF2
SURF1
NIT2
SIK1B
SIK1
DMWD
ASPM
AP5Z1
TCOF1
GLE1
LSS
XPR1
SENP5
SPACA9
AK8
ZC3H14
MRPS25
MDM1
FOXJ1
CAPZA2
TRIM45
SHCBP1
PCOTH
MIPEP
TOP1
EXOC3L1
FANCC
ZNF212
ARL8B
EXOC5
AP5M1
E2F4
BRPF1
SRPK2
PDZK1
FRG2
DDX19A
RBM48
PEX1
CHUK
MXD1
USP36
FCF1
AREL1
NDUFV3
FBXO25
PLCG1
ITGB5
SLC25A26
GTPBP4
C12orf45
MDM4
TCP11L2
ZNF706
SAV1
MYL5
ATP5ME
NOL8
CENPP
AEN
CFDP1
E2F8
SFXN2
ARL3
KPNA1
GTF3C5
ZNF622
MKRN2OS
MKRN2
COX19
IKZF5
ACADSB
TENT5C
CNOT3
SLC35D2
SLC48A1
TWNK
MRPL43
NKX1-1
RAD18
PDXDC1
MRPL45
GCSH
STX4
WDR47
IDH3A
NOMO2
COMMD5
DDX11
STX16
CYB5B
PUM2
CLPTM1L
USF3
SLC15A4
NUF2
UFD1
CDC45
ZGRF1
LARP7
MED23
ZFAND2A
TAF3
CCND3
SCRN3
CIR1
VPS13B
RNASEH2C
PMPCA
ENTR1
TADA3
ARPC4-TTLL3
ARPC4
PSME2
RNF31
SPRYD3
RNF19B
ADAMTSL4
MARCHF11
SNRPE
METTL3
NME2
ATP5MG
UMPS
FAM24A
AKAP10
LRPPRC
SPTAN1
USP54
AP3B2
METTL6
EAF1
GGCX
GCH1
CSTB
SLC37A3
MCM10
NAGK
POLR2K
FBXO43
TAF5
PFDN5
MYG1
PDIA4
ATP6V0A2
RAB21
SERPINB6
C2orf50
CHD6
FBP1
SMYD5
SMC2
PRKAR1B
MRPL21
IGHMBP2
DYNC1I2
WDR70
YIPF4
SART1
RIDA
POP1
IFT22
VAV2
TTK
GTF3C4
DDX31
ODF2
TAF4B
EEF1E1
SLC35A5
ATG3
NOP9
DHRS1
PUF60
LETMD1
MTMR14
H1-10
WDR19
GRWD1
NAA35
CALM1
USP42
TMEM251
MOAP1
MARCHF6
PSMB4
PCYOX1L
TSPAN9
MYBL2
ARCN1
SH3BGR
LCA5L
MRPS14
SLC25A40
DBF4
LIN9
ROPN1L
NEPRO
KIF2A
FBH1
GIT2
ANKRD13A
ANKRD16
UBR5
XPOT
CCDC186
ZDHHC7
PRRT4
NME1
COG7
C6orf89
CCDC146
GPAM
TAMM41
MTHFD2
SYF2
TMEM41A
LRRC37A3
NGDN
PIP4P1
LSM14B
PNN
VGLL4
C8orf76
STK3
ABHD4
SLC2A6
MED20
BYSL
STAT1
TTLL5
ERG28
ZNF451
TULP3
TMEM127
CIAO1
PPP2R5B
UBA2
MAP3K3
HAUS5
VIPAS39
AHSA1
CIZ1
VPS4A
SLCO4A1
ZBTB38
B4GALT4
ZNF778
PRMT2
RSL1D1
ANAPC7
PRKAB1
RFWD3
RMDN3
CDIPT
PDF
MACROD1
LUC7L3
ULK1
TXLNG
OVOL1
CENPN
SSNA1
ANAPC2
WDR43
SDAD1
SMARCA4
PSMD12
NDUFB3
FAM126B
GOLGB1
VPS72
OSGIN2
MYL12A
SEMA4B
CHPT1
NPRL3
CDK7
ASF1B
NDUFS3
KBTBD4
DCTPP1
HACL1
BTD
TOP3B
ASCC2
MMS22L
CAPN7
SUB1
PSME1
PRKAA1
AUH
GPR107
NR4A2
FITM1
UNC119B
KCTD3
MATN2
UBFD1
EARS2
EIF3C
EIF3CL
ZNF688
POLR3F
DZANK1
YIPF3
POLR1C
DPY19L4
FAM161B
COQ6
HEATR5B
GPATCH11
RFX1
IFT88
ARFGAP1
SAC3D1
KIF3A
TRIM25
PIKFYVE
HACD1
BROX
AIDA
DRAM2
CEPT1
EDF1
EEF1AKMT1
KLC1
ARHGEF5
KIAA0040
VTA1
NMBR
VPS50
HEPACAM2
TOMM22
SYS1
HIF1A
C18orf21
FBXL12
NUDCD1
NAA20
PSMB7
EAPP
TPD52L2
ABHD16B
TMEM33
LNPK
TERF2
PPP1R12A
NUP210
APPL2
FAM102A
MPP5
ERBB3
UBTD2
RBM17
BUB1B
GOLGA3
RPLP0
FH
HERC4
SLC13A3
TP53RK
CCNB1IP1
PODNL1
DCAF15
ESD
RGS16
CCDC183
TMEM141
MAP3K20
CD99
SCFD2
ACOX3
WIPI1
LTN1
TRMT44
B3GNTL1
RBM8A
TBC1D15
SNRPC
SEC13
CGGBP1
PAM16
CCZ1B
KRR1
TOR2A
NUDT8
ZNF654
PLS1
COX6C
AMIGO1
CERS5
SYNE2
ERGIC1
LRP12
ADA
RBBP8NL
URB1
FBXW9
SLX1B
SLX1A
BOLA2B
BOLA2
MTRNR2L2
MSH3
DHFR
ACTR6
KCTD9