ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089500 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◣ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
TRIM37
PSMD6
TEX14
RAD51C
NPAS4
SLC12A9
HEATR6
BRIP1
USP32
TUBD1
RPS6KB1
PFDN4
FAM72C
FAM72D
HTR5A
BCAS4
FAM72A
BMP7
ARFGEF2
IQGAP3
UBE2C
C12orf66
NUDT1
MRM2
NCAPH
NOL8
CENPP
FAM72B
SCRT1
SGO1
PDE4DIP
HSF1
BOP1
NUF2
FANCI
RNFT1
UNG
ALKBH2
FANCD2
TROAP
RFC3
KIF14
RRP15
TRIP13
BRD9
DLGAP5
DZIP3
CIP2A
METTL1
EEF1AKMT3
CYP27B1
SKA3
MRPL57
RNF166
CTU2
DYNLRB2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DHX40
ZNF217
TTC27
APPBP2
HSDL1
DNAAF1
PPM1D
ZNF331
MTFR2
VRK1
IQSEC3
ZFPL1
CDCA5
TMEM262
RAB22A
KPNA2
SIKE1
C3orf14
TRMT61A
POLQ
BLM
C16orf46
NTAQ1
EDC3
MCM10
SMC2
NET1
CCNA2
CCT2
MOK
TICRR
NEMP1
NRAS
NEIL3
CPLX2
ANGPTL6
PPAN-P2RY11
PPAN
DCLRE1B
AP4B1
P2RY11
CYB561
BIRC5
WASHC5
NSMCE2
RAD54B
METTL3
CYB561D1
SGO2
CSTF1
AURKA
SKA2
PRR11
EIF2D
SMYD5
BARHL1
HIPK1
LIX1L
GRWD1
TSR3
GNPTG
RRM2
TOP1MT
NDUFAF6
CCNE2
UTP20
INKA2
DDX20
SUMF1
VARS1
MAD2L1
TTK
BUB1B
CCNB1
FBXO32
OAZ3
ASPM
ZAR1L
BRCA2
C12orf45
PGBD5
TONSL
IPO4
ATXN7
RAD18
SPTLC1
FBXO5
TTF2
C16orf71
ANKS3
HMGB1
XRCC2
SECISBP2
SMIM5
RTF2
TOP1
RRP1
KCNH6
KIF20A
BRD8
PARD6B
STOML1
PML
L1CAM
DSCC1
WDR4
LTV1
SAP30BP
RECQL5
FDX2
SPC25
SMG8
RECQL4
LRRC14
PKMYT1
QSOX2
LOC101928764
ASF1B
MAMDC2
HCFC2
GLT8D2
TBX2
TRMT61B
TCF19
CCHCR1
CDK5RAP2
KLHDC4
BCAS1
PPM1E
NCOA3
CRIP1
TEDC1
CDC14B
INTS2
EIF3C
EIF3CL
SHC1
CKS1B
PABPC1
AP3B2
CKAP2L
ACOX3
PRCP
DDIAS
METTL2A
MCRS1
PPP1R16A
FOXH1
SLC37A1
RSPH1
AP4E1
NOTCH2
SHCBP1
KIFC1
CDC20
TMEM186
PMM2
BUB1
MRPS23
NHP2
TEDC2
KCTD13
DUS2
DDX28
EXO1
NAGPA
RUVBL1
CEP55
RBM19
ZC3H3
MIS18A
MTRNR2L2
MSH3
DHFR
RPP40
MOCS3
DPM1
ATXN1L
CDIPT
NEK11
ASTE1
SCFD2
NKX1-1
THOC7
TTLL4
RTKN2
PREX1
ATAD2
NUDT4B
NUDT4
SERINC3
SNAP25
NUDT2
KIF24
NUP107
GGH
PHTF1
BICDL1
SNRPE
RCCD1
CDC25A
POLR2J3
CREBRF
DHODH
ATP6V1C1
NUDT15
SQLE
FBXW8
TADA3
ARPC4-TTLL3
ARPC4
GTPBP10
FAM207A
XKR7
PLK1
POLR2J
TRIM33
MYBL2
KNOP1
KLF10
TSEN2
AEN
TEX10
CEP128
RAD54L
DYNC2I1
WASHC2A
DHX37
BRI3BP
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
PTPN1
NOP16
HIGD2A
MRPS21
CENPW
GTPBP4
MKI67
RABL2B
SLC35B1
CHUK
NOL11
TPRA1
SF3B4
DPH7
RNF40
CCDC189
WDHD1
SOCS4
NUB1
POC5
KLHL36
VPS33A
ZFYVE1
ZMYND8
ESPL1
NAA35
ATP1A1
METTL6
EAF1
PRELID3B
DMXL2
ZNF688
ZBTB9
RHEBL1
RACGAP1
ZHX3
MRPL27
EME1
PES1
AOPEP
TF
TOPBP1
MND1
MAPK8IP2
MRPL3
BOLA2-SMG1P6
GTF2H3
EIF2B1
HEATR1
NOM1
PRKAR1A
URB1
PPP1R12B
FANCC
UTP4
DERPC
CHTF8
RPUSD1
CHTF18
PRMT6
RAD51
TAF13
NBPF15
PLCG1
PIGU
ZNF778
POFUT2
RMDN1
CPNE3
WASHC2C
PLK4
VAC14
TSFM
EEF1E1
CDK5RAP3
ZP3
OS9
CIT
YPEL2
IFT22
VPS50
HEPACAM2
CCDC150
AGFG2
NME1
ANAPC7
PNPT1
LRPPRC
DENND2C
C1orf54
APH1A
CCDC86
DNAJC25-GNG10
DNAJC25
QTRT1
NDUFS3
KBTBD4
LRWD1
ALKBH4
RHBDD2
ZSCAN2
LRFN4
GDI2
SPATA25
CTSA
NEURL2
RXYLT1
RCE1
PSRC1
ITGB4
ATG101
BICD2
COMMD4
NDUFV1
MED20
BYSL
FIS1
PTRHD1
CENPO
ADCK1
MPHOSPH6
IDH3A
SLC45A3
BCAS2
GNAI3
CRYL1
GTSE1
TCOF1
TAMM41
GPATCH4
POLR1B
TWNK
MRPL43
PARPBP
NUP37
DNAJA3
PXMP2
POLE
PWP2
LOC102724159
TAF3
RABL2A
KIAA0895
ANLN
PDXDC1
ZNF888
TTLL11
CLCC1
CDT1
NOL10
TMEM249
SLC52A2
FBXL6
COG7
DUSP12
RBBP8NL
PMS2
AIMP2
INIP
SGTB
NLN
RUNDC3B
KATNIP
GTF3C1
MTMR14
CSRNP2
HEATR5A
METAP1D
FBXW9
PRMT2
TPRN
TMEM203
NDOR1
CYC1
CCNB1IP1
CDK1
UBE3D
DOP1A
RNF115
POLR3C
GFPT1
CHFR
RMND5B
TRIAP1
ABCA5
MCM7
AP4M1
C6orf89
PPIL1
SYT5
MDM4
SUV39H1
TMEM258
FEN1
ARFGAP1
TUBB3
RAE1
PWP1
IARS1
HASPIN
ZHX1-C8orf76
ZHX1
TATDN1
NDUFB9
POLR3F
DZANK1
CKS2
DYRK1B
PUS1
ZFAND2A
CLCN7
CRBN
ZNF771
NIP7
COG8
UBL7
TAF1C
ADAD2
NOMO3
GPSM2
LRRC29
STX16
DUS4L-BCAP29
DUS4L
COG5
NBPF11
GOLGA5
DDX11
TECPR1
TRUB2
COQ4
DDX49
COPE
TMED5
CCDC18
H3C15
H3C14
H2AC19
H2AC18
CUL7
RELA
DBNL
RDH5
BLOC1S1
ITGA7
INSM2
UTP23
ZNF367
DERL1
NIPSNAP3A
INTS1
MDM1
WDR59
NOL6
KLHL12
ALG8
CNPY2
RIPK2
SPNS1
C8orf33
RABIF
PFDN5
MYG1
MACROD1
NBPF1
CCT5
ATPSCKMT
TACO1
DNAL1
TBC1D30
FAM214A
GNS
METTL25
CCDC59
LYSMD2
TPTE
SKA1
KIF11
MFSD1
RBSN
ANKRD35
CDK7
ASNS
NME2
COQ2
CKAP5
OSGIN2
ACBD7
ATR
TIMM9
KIAA0586
PIF1
MXD4
CEP112
NEK2
RHNO1
FOXM1
DNAH7
CEP135
MTHFD1L
GFOD2
CNTRL
C5
ANKRD46
MCOLN1
ATP5F1E
NARS2
SPPL2A
PRPF3
PRICKLE2
EBNA1BP2
CFAP57
NUFIP1
GPALPP1
CENPE
C20orf27
PIAS3
CHRNB2
IPO11
TAF4B
HAUS7
OXR1
RNASEH2A
PRDX2
CCNG2
SLC25A19
SMC6
GEN1
CEP72
CRELD1
AAAS
WDR62
THAP8
NOC4L
DDX51
FAM200B
TRMT5
SLC38A6
UTP18
MBTD1
MMS22L
AP5Z1
MRPS14
CENPA
TCHP
ZNF706
WDR43
RABEPK
CFAP69
RMI2
SLC35E3
CLPTM1L
HAT1
SCRN3
CIR1
PSMC5
FTSJ3
ZC3H8
FURIN
TRMT1
NACC1
RNASEH1
NEK10
SPATA33
ZNF622
LSM5
AVL9
SLF2
TCTN2
SHOX2
RSRC1
ATG7
ZDHHC24
ACTN3
NPM1
CLTC
YIF1A
TMEM151A
CHD1L
PRKAB2
EXOSC5
BCKDHA
NAGK
POLE3
C9orf43
PRPF19
ANGEL1
RAD9A
INPP5K
NAA25
ADAR
ZC3HC1
ZNF34
ZFP41
WIPI2
RPL8
GSN
RAB14
PRKAB1
ATIC
KRT3
SKIV2L
NELFE
POLR2K
FBXO43
MYBL1
RPRD1A
USP14
FRAT1
ZNF212
ECT2
SURF2
SURF1
PSMB4
WIPI1
GFM1
WDR61
YEATS4
PYCR3
HJURP
DYNC1I2
MFSD5
RITA1
DDX54
VTI1B
CEP41
KIF18B
CENPN
SAXO2
EFL1
NGDN
PMPCB
KIAA1586
ESCO2
CCDC25
KIF2C
ARMC2
MMUT
CENPQ
NOP9
DHRS1
SZT2
MED8
AMZ2
LSM8
CNIH1
CDCA8
C1orf109
CENPH
FBXW2
CALCOCO2
PIP4P2
HRH3
METTL18
C1orf112
RNF114
ACTR6
CCDC146
RRP1B
HSF2BP
TUFT1
XPOT
SPDL1
SLC22A15
KLHL18
KIF9
THAP5
DNAJB9
YIPF4
PNO1
RSL1D1
LOC112694756
SCNM1
LYSMD1
ZNF805
CLBA1
CORO1B
MYO5C
SRPRB
ECSIT
BZW2
ANKMY2
CCND3
SMG5
GPR89B
NBN
NOMO1
MIGA2
GLMP
VHLL
UTP25
POLL
DPCD
EXOC5
AP5M1
THEM4
ZNF641
REXO4
ADAMTS13
TBL3
PPIL4
SYS1
RNF151
MYL12B
OTUB1
SPEF2
P2RY2
CS
PDZD11
KIF4A
MRPL22
GEMIN5
TMEM250
RBM28
SLC35C2
CFDP1
ZNF408
ARHGAP1
STRIP1
EID2B
NEDD4
GTF3C4
DDX31
ATG14
RPLP0
GABARAPL2
SUPT4H1
FAM227B
DTWD1
SNRPD1
HMGB2
TMEM167B
SPOP
EEF2K
GFUS
CDK20
NTSR2
VPS45
VCPKMT
ZSCAN25
THAP10
LRRC49
SPG7
MAD1L1
MAPK8IP1
LTN1
E2F8
SARS1
DPY19L4
WDR25
WARS1
HPS3
UNKL
SMPD4
MZT2B
LTO1
MELK
CIART
TMEM150A
DNAJC30
BUD23
GABPB1
MAPK8IP3
CARHSP1
NFKBIE
TMEM151B
XRN2
ANAPC1
MARS1
ARHGAP9
MARCHF9
CDK4
RFWD3
FANCA
SETDB1
SLC25A26
CEP162
CMSS1
ZNF696
ZC3H18
PDPR
ALAD
SWI5
GOLGA2
WDR74
RRP12
UFD1
CDC45
CKMT1A
KLHL24
GLE1
FPGS
G2E3
LSS
ATF2
TARS2
PUM3
ODF2
SHQ1
DUT
SEC22A
GINS2
OVOL1
DNA2
TRAIP
HEATR5B
GPATCH11
DEPDC1B
PRC1
KNTC1
SMAGP
FBP1
TASOR2
HSPBP1
BRSK1
GAR1
KXD1
ATG5
DNAAF2
GTF3C5
GOLPH3L
GALK1
TMCO6
TC2N
AURKB
DDX21
RRP9
PARP3
PDSS1
PPIB
PRPF4
CDC26
IDUA
TRMT6
MCM8
WDR46
PFDN6
SH3BGR
LCA5L
IDI1
CREB3L2
PDIA4
WDR37
TBC1D31
ZNF273
PSMD4
CYBA
EIF3E
LLPH
TMEM170A
POLG2
DNAJB2
HSPA9
RIOK1
CAGE1
SDAD1
ATAD5
SFSWAP
CAD
ZMAT3
AP1M1
ATRAID
BOD1
ISCA1
SPACA9
AK8
SLC5A6
CSTB
FAM174A
NTMT1
YWHAG
PDCD2
CHCHD6
CFAP54
TBC1D13
PLEKHM3
PRIM2
MET
BLOC1S2
SELENOS
CSDE1
C8orf76
RECQL
GOLT1B
SPC24
TMEM67
TASP1
PIP4K2C
LAMTOR3
LCMT1
ZNF497
DARS2
CENPL
ZNF789
SLC2A8
GSTK1
ARHGEF35
EXOC3L1
LIN9
EDC4
ENTPD5
BBOF1
E2F4
EMC2
NOMO2