ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9187409 | MIA Paca-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◣ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

FRG2C
SNX16
NPAS4
COL23A1
HTR5A
TDRD7
CAMTA1
FRG2
CPLX2
SLC39A3
WDR74
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQGAP3
DCUN1D2
NEK2
SLC35A4
APBB3
MUC3A
GSN
RAB14
TRIP13
BRD9
CCNG2
MTRNR2L1
COPS7B
PDE6D
NUF2
MAPK8IP2
IQSEC3
PDE4DIP
PSEN2
POLQ
DDX11
CCDC200
PGBD5
MRPL44
TMEM41A
ZNF555
FAM72B
THOC3
KIF18B
POLR2J3
CYB5R4
SRRM3
EXO1
XKR7
TMEM242
CENPW
WASHC2C
SHCBP1
CCNB1
SKA3
MRPL57
DUX4
L1CAM
PEX3
ADAT2
CKAP2L
CHGB
B4GALT7
TRMT61B
FBXO5
MTRNR2L8
NUDT15
SPNS1
SMC2
NCAPH
RUVBL1
TSR3
GNPTG
EEFSEC
CCDC92B
FAM72C
FAM72A
BIRC5
MTRNR2L2
MSH3
DHFR
ATG14
CENPS-CORT
CENPS
BRIX1
RRP15
RNF166
CTU2
RHNO1
FOXM1
GTF3C3
C8orf33
ANKHD1-EIF4EBP3
ANKHD1
PBK
MRM3
GLOD4
NLE1
SCRT1
MED23
MCM10
DEPDC1
XRCC2
NOL8
CENPP
ZNF778
KIAA0895
ANLN
ACBD6
POLR3H
SLF1
KIAA0825
CCNA2
ESCO2
CCDC25
PAXBP1
HEXA
SPATA25
CTSA
NEURL2
AURKB
NDUFS7
DIAPH1
EDC3
NSFL1C
MRPS35
VRK1
MKI67
SMG8
WDR36
ZNF558
NAGPA
TTC26
FANCD2
BBS5
PKD2L2
STX18
MRPS23
CEP55
FAM24A
SKA1
CPEB4
NBPF1
MRI1
H6PD
TTK
BARHL1
SIGLEC10
GTF2H2C_2
GTF2H2C
RNF187
COMMD2
OPA1
MTF2
AGK
CDK7
ZNF688
PIK3CD
MAD2L1
ZFYVE1
METTL3
MCOLN1
STX16
EIF2D
TFAP4
MTERF4
NSUN4
CEP43
TIPARP
SGO1
DRG2
DUS2
DDX28
RTTN
MIS18BP1
MIS18A
QTRT1
ZNF391
UTP20
MRPS14
KIF20A
BRD8
PGAM5
SASS6
GGH
FBRS
OAZ3
MRPL39
SEC24B
SERPINB6
DNAJC25-GNG10
DNAJC25
VPS35
SMC4
IFT80
WASHC2A
PPIH
FAM72D
GFM2
C5orf51
CCNB2
RRM2
NMNAT1
LZIC
OSCAR
NDUFA3
VPS50
HEPACAM2
ZNF77
CDKN2AIPNL
DIO1
CDC20
NDUFAF5
ESF1
TATDN3
NSL1
TRIAP1
STX6
GTF2H2
POU2F1
RABL2A
H4C14
TF
HUS1
TOPBP1
IFT46
TTLL4
SAR1B
IDH3B
PRKCQ
WASHC5
NSMCE2
STX7
CYP4F11
DDX18
CDC25A
MTFR2
TMEM171
DCLRE1B
AP4B1
CENPH
TMEM39A
HINT3
RNASEK
C17orf49
RAD51
ITGB3BP
EFCAB7
SF3A3
SMARCD2
STIL
FBXW8
ZNF276
VPS9D1
ANKRD31
NEIL3
DLGAP5
PPWD1
CENPK
C17orf75
COMMD1
DTX2
ASF1A
ATF6
PTK7
GBA
BUB1
CWF19L1
AARS2
FAM207A
DNMT3A
ZGRF1
LARP7
ATP6V0D1
AGRP
TTLL11
GTSE1
SCNM1
LYSMD1
TXLNA
RAPGEF6
MRPL21
IGHMBP2
PARL
CCDC88A
ADAMTS14
NOM1
DISP2
SLC47A1
KIFC1
PIMREG
TIMM17A
ISY1-RAB43
ISY1
ALG10
GAA
DZIP3
CIP2A
USP30
SELENOT
MFAP3
FAM114A2
TRIP4
TRMT5
SLC38A6
SSBP1
KCTD9
CDCA2
ATG5
HEATR1
CXCL5
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SULT1A4
SULT1A3
CDC14B
YBEY
MCM3AP
NEURL1B
NME1
MRPL27
EME1
KXD1
ASPM
CREG1
UTP25
ATAD5
ARHGAP45
SRFBP1
SYNJ1
CFAP298-TCP10L
CFAP298
NGDN
TRMT1
NACC1
C1orf54
APH1A
ADAM15
URB2
TAF5L
DBF4B
NCBP3
MYBL2
MRPS31
ZNF410
FANCI
FAM174A
CFAP299
NOXA1
TMEM248
MAP3K7
PEPD
GPATCH1
DPYD
TPRN
TMEM203
NDOR1
TTF2
COMMD9
SLC25A46
ZSCAN22
DDX46
NDUFA10
OR6B2
SLC44A1
SUPT7L
SLC4A1AP
SLC35A3
NR6A1
TSEN54
CASKIN2
FAM111A
RTBDN
CEP120
NAE1
PDE11A
RBM45
EFNA5
NOTCH2
SLC25A51
PLK1
H4C15
CEP128
RAD51AP1
C12orf4
SSNA1
ANAPC2
BRF2
GFM1
SLC33A1
PPIA
RBBP5
TARS2
THEM4
ATP6V1H
WDR53
FBXO45
DCAF10
THAP10
LRRC49
DNAJC11
FBXO4
SUMF1
MPHOSPH10
MCEE
HJURP
DUT
TRMT61A
CRBN
MXD1
POLR3G
MBLAC2
GTF3C5
TCTN3
MRPL3
ASNS
FRA10AC1
PFAS
CTC1
MACIR
INTS12
GSTCD
H4C8
CCDC91
HROB
CENPF
LMAN2
TBC1D19
JUND
PUS10
PEX13
LSM11
SECISBP2L
HASPIN
ZBTB17
AGBL3
TMED5
CCDC18
NUP54
ADPRS
TEKT2
DARS2
CENPL
STPG3
NELFB
CDCA8
C1orf109
SDHAF3
LRRC59
ARMH4
TTC4
MIGA1
ATP7B
ALG11
HES3
GNAL
SYT5
NUP35
REXO4
ADAMTS13
MRPL40
HIRA
LRRC37A3
TBC1D13
TSFM
MARCHF8
CYRIB
STX8
CFAP52
PCBD2
LAMTOR5
KCTD18
TRIM2
CDK1
NET1
DEPDC1B
MMUT
CENPQ
EXOC3L1
KIAA0895L
ZNF800
MCM7
AP4M1
KDM5B
YPEL2
ZNF680
SNX10
BNIP1
KLHL20
HIBADH
ZNF519
GRPEL2
DNER
SCFD2
IPO4
RBM42
NUDT1
MRM2
FAF1
GATAD2A
POLR2C
TTPA
C6orf89
RBKS
BABAM2
HNRNPH1
BLM
ASF1B
DNA2
TCOF1
DDX19A
DLGAP3
BDH1
ZFPL1
CDCA5
TMEM262
TMEM199
POLDIP2
POLR1F
NOL10
CDC25C
LGALS8
AP3B1
NOTUM
TTC27
HMGB1
SEC31A
SH3GL1
CHAF1A
DYNC1I2
RARS1
THAP9
FITM2
GIT1
ANKRD13B
CYP19A1
GLDN
ZAR1L
BRCA2
ZC3HC1
PDLIM7
KLHDC4
TMEM230
PLS1
FKBP3
FANCM
RAD54B
TOX4
RAB2B
ZNF335
ACSF3
ZMPSTE24
RPS19
NFE2L2
CALM1
ZKSCAN4
VTA1
NMBR
ERLIN2
WDR27
C6orf120
PSMF1
ZMAT3
U2SURP
TTC14
RAB3C
METAP1D
KIF14
SLC39A4
CPSF1
BEND3
NKX1-1
COX10
METTL18
C1orf112
CMTR1
ZFP62
SEC23A
PPIL4
ZNF92
CHMP1B
ZCCHC4
CREBL2
ZNF316
ADCK1
TAF3
BDP1
ZNF234
PRPF18
SGSM1
NDUFS3
KBTBD4
SRSF11
LRRC40
LAMP1
METTL15
KIF18A
FRG1
RUBCN
FYTTD1
LCN8
MND1
FAAP20
VPS37D
WTIP
EIF2B3
DSTYK
MTIF2
HAUS5
PHACTR2
MAK16
FIGNL1
ZSCAN25
LAMTOR3
SVOP
C20orf204
NSG2
IPO11
DCP1A
SNAP47
JMJD4
HAGH
FAHD1
SLC25A26
TSGA10
ZNF23
FXN
STK10
PIP5K1B
USP35
KCTD21
QSOX2
SSBP2
NUDT4B
NUDT4
VCPKMT
DCP1B
SLC25A24
AGL
SHQ1
KNL1
TFPT
PRPF31
MIA3
RPS7
AMZ2
ASB6
PEX12
ANTXR1
PTPN21
CCDC86
RCOR3
STX11
MED4
MLPH
KIF2C
COG2
MRPL30
MITD1
FAM98A
ZER1
COX16
KHK
IQGAP2
TMTC1
COMMD4
JMJD1C
ZBTB7B
URB1
LARP1
ZNF830
CCT6B
TEAD1
ATR
LARS2
PELP1
JADE1
UBE2C
LSM5
AVL9
DDX1
TVP23B
DPY19L1
SRPRB
NUP107
CCDC77
KLHL12
KDM5A
NAPA
CHCHD3
UBOX5
FASTKD5
ZKSCAN8
DYRK4
KANK4
SNRPD1
SPC24
UHMK1
ATE1
STAT3
C18orf21
UBE3D
DOP1A
H3C2
H4C2
PIAS1
NAA20
ANKRD12
NUDCD2
HMMR
EDARADD
POLR3F
DZANK1
CLTC
RRP1B
HSF2BP
ZNF724
DHX40
NAGK
YIPF3
POLR1C
AHCY
CHERP
MRPS33
MNAT1
NDUFA9
AKAP3
P2RY1
NRN1
RFC3
KIF11
SOD2
WTAP
TEX46
KDM1A
ZSCAN9
TCF19
CCHCR1
TONSL
H4C3
H1-6
ITGB3
ZNF185
QKI
P2RX5
CRKL
SMN2
SMN1
P4HA1
HSD17B8
RING1
HNRNPA1L2
CDKN1A
GOLGA7
SNX18
OLFML2B
CAST
PGPEP1
SCRT2
CRNKL1
CFAP61
SETD1A
IVNS1ABP
UXT
CD24
FBXO48
APLF
CSTF2
ADGRG6
CCDC97
NADK2
RNF6
GCLM
GTF2H3
EIF2B1
NPM1
ZBTB40
GOT2
SESN1
CEP57L1
RABL2B
ECSIT
YARS1
S100PBP
RPGR
WDR55
RAD50
AKNA
HRK
TLR5
MRPS15
DPY19L4
PLEKHM3
BICDL1
CDC25B
RPS20
DDHD2
SPIRE2
WDR62
THAP8
SPC25
PHTF1
RRP8
ILK
EDC4
SCAND1
NKAP
MLLT1
ZCCHC14
USPL1
SURF6
ZNF398
CFAP69
TXNDC9
EIF5B
TIMM22
FAM169A
UFD1
CDC45
DIAPH3
FDX2
NBPF15
EBAG9
RECQL4
LRRC14
CHD1L
LIN9
ZNF3
YTHDF2
DNAJC1
LHFPL5
DIMT1
GATB
OGDH
RBM48
PEX1
SMAD5
TEX15
MUC12
NUDCD3
MAGOH
HPCA
GEMIN7
ZNF296
GPAT4
POC5
FOXJ3
FAM133B
COA6
ACAD9
NBAS
PXK
PRODH
LOC102724788
DYNC2I1
RIOK1
CAGE1
CCDC150
C16orf87
MAIP1
MTLN
CAMSAP2
NR3C1
HCFC2
GLT8D2
AXDND1
TSN
CWC25
SMC6
GEN1
TOMM6
PSMB2
ZSCAN30
PPIC
TOMM22
ZNF148
SMIM12
OTUD7B
FUCA2
TMEM210
LRRC26
EXOC2
TEFM
WDR11
PWWP2A
RAD54L
ADAT1
SLC25A16
TOP3A
SMCR8
DNTTIP2
GET3
CLK2
CYREN
CASC3
PSMD9
HPD
PHF5A
ACO2
TMEM222
ERCC5
MAP2K1
VPS72
TPGS2
MYO1B
BUB1B
TRAIP
FH
MRPL55
TRIM52
MAN1A2
RAD54L2
PFN2
FBXL13
ARMC10
RAD9A
NECAP2
OTULIN
UCHL5
RO60
BRWD1
ZNF668
ZNF646
FGFBP3
TRIB3
TJP3
TAF4B
HARS2
HARS1
UBXN11
RFX1
PDZD11
KIF4A
PSMD3
GARS1
MMAA
MAT2B
HES1
SPATA9
RHOBTB3
POMZP3
EIF2B5
CUL9
MFSD14A
TRPC4AP
ASMTL
ZSCAN26
SKIV2L
NELFE
KCNK5
TRUB2
COQ4
MCCC1
TTC30A
SLC25A53
MOSPD2
FANCB
ITGAV
SGO2
GMNN
VPS45
GTF2B
XXYLT1
TOR1AIP1
TOR1AIP2
VPS36
CKAP2
TUBB
MDC1
DCDC2
KAAG1
RNF223
DPH1
RTN4RL1
CDC6
COPS8
SLC30A5
WDR70
TMEM132B
DNAH7
AAAS
ZWINT
KIAA1586
GLI4
HECW2
CAV1
TBRG4
NEMP1
IQCG
LMLN
ZBTB45
KLHL7
PARP1
ZNF581
CCDC106
ACOT6
ACOX3
POLR1B