ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9187415 | MIA Paca-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◣ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

SNX16
MTRNR2L1
DUX4
COL23A1
FRG2C
WDR74
MUC3A
FRG2
NXNL1
MTRNR2L2
MSH3
DHFR
EPN1
NPAS4
TDRD7
CYP4F11
PBK
CCDC200
HTR5A
GSN
RAB14
IQGAP3
DDX11
CAMTA1
CPLX2
SCRT1
MTRNR2L8
PIMREG
NOL8
CENPP
CKAP2L
ARHGAP45
DLGAP3
MTFR2
ASMTL
TTK
MIS18A
CDCA3
AURKB
ZNF331
FAM240C
GGH
ZNF688
SLC35A4
APBB3
DNAJC24
DCDC1
OPRL1
LKAAEAR1
KCTD9
CDCA2
FIGNL1
AGFG2
CEP43
GTF2H3
EIF2B1
RRM2
EXO1
MRPL27
EME1
DEPDC1
CCNB1
KIF18B
EDC3
SASS6
RTTN
MAD2L1
POLQ
PGBD5
NUDT4B
NUDT4
CCNG2
WDR62
THAP8
FAM72B
TIPARP
THAP10
LRRC49
FAM24A
RPS5
ZNF92
DCUN1D2
TRIAP1
SYT5
HMGB1
POLR3H
PIK3CD
FBXW8
VCX3A
FAM72C
FAM72A
FAAP24
CEP89
SHCBP1
GBA
LIN28A
NUDT1
MRM2
CHGB
CDC20B
EIF4ENIF1
UTP20
FAM72D
BIRC5
RRP15
PSEN2
SKA3
MRPL57
ESCO2
CCDC25
MAPK8IP2
B4GALT7
H4C14
CCDC77
PLK1
KDM5A
NCAPH
TRAIP
BEND3
XRCC2
YPEL2
SP4
ZNF316
LPAR3
CDK1
ZNF276
VPS9D1
MOSPD2
FANCB
KIF20A
BRD8
DTX2
SKA1
TRIP13
BRD9
RAPGEF6
QTRT1
SPNS1
ZAR1L
BRCA2
RAD51AP1
C12orf4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GTSE1
RNF187
NEK2
HASPIN
H1-10
RNASEK
C17orf49
POLR2J3
HEXA
RHNO1
FOXM1
RAD54B
KLHL18
KIF9
METTL18
C1orf112
SCLY
NEIL3
TTC26
MND1
CLSPN
SMC4
IFT80
ZMAT3
OGDH
RNF223
METTL3
COMMD2
SERPINB6
RNF166
CTU2
RCCD1
KPNA2
KRI1
CDKN2D
EIF2D
THOC3
URB1
ZNF778
VPS35
CCDC92B
CRIP2
KIAA0895
ANLN
ZNF107
TTF2
RFC3
CYB5R4
DUT
RPUSD1
CHTF18
PEPD
IPO4
NFE2L2
NUDT15
ZNF581
CCDC106
TMEM181
FOXQ1
BOLA3
DNAH7
LRP2BP
ANKRD37
DLGAP5
ZNF367
CRNKL1
CFAP61
NUF2
FBXO5
METAP1D
SGO1
CCNA2
TRMT1
NACC1
FANCD2
METTL1
EEF1AKMT3
CYP27B1
UTP25
SCFD2
SMYD5
WDR4
UNG
ALKBH2
CCDC86
SLC12A9
RRP12
C16orf71
ANKS3
RABL2B
RAD51
NAGPA
WASHC2C
BCAS3
NME1
CCT2
C12orf66
CDC25A
RBM19
ZFPL1
CDCA5
GRWD1
DZIP3
CIP2A
CCNB2
TMEM262
TTC27
VPS33A
WASHC2A
DHX37
BRI3BP
FBXW9
MCM7
AP4M1
SLX1B
SLX1A
BOLA2B
BOLA2
BLM
LTV1
CDK7
SUMF1
FANCI
MAMDC2
PSME3
NOL6
BOLA2-SMG1P6
NUP214
XKR7
MOK
RAD54L
C16orf46
ACOX3
RABL2A
EBNA1BP2
CFAP57
CEP135
DPH1
TICRR
ANGPTL6
TRMT6
MCM8
TMEM186
PMM2
RTN4RL1
SHC1
CKS1B
NLE1
NAT10
EXOSC5
BCKDHA
TRIM37
PPAN-P2RY11
PPAN
NBPF1
VARS1
GPATCH4
BUB1B
ZMPSTE24
KIF15
KIAA1143
TBRG4
DYNC2I1
SULT1A4
SULT1A3
IQSEC3
SPATA25
CTSA
ATP6V0D1
AGRP
ACTR6
NEURL2
WASHC5
NSMCE2
GTF3C4
DDX31
TRUB2
COQ4
KIF2C
SMC2
TMEM248
RNF40
CCDC189
NDUFAF6
TROAP
TRIP4
PIGU
KNOP1
POLR1B
UFD1
CDC45
SPCS1
GLT8D1
USP2
UBFD1
EARS2
NOP16
HIGD2A
CCNE2
NUDT2
KIF24
HAGH
FAHD1
PMS2
AIMP2
PDE4DIP
MCM10
HCFC2
GLT8D2
HEATR1
SLC25A26
PRCP
DDIAS
HEATR6
LYRM4
FARS2
VTA1
NMBR
UBXN11
NOL7
SUPV3L1
POU2F1
POLR3D
KIF23
KIFC1
RPP40
CENPW
PLK4
KLF1
PSMD6
POC5
GCDH
LRRC29
CDC20
PNO1
DHX40
COMMD9
DYRK1B
DNAJC25-GNG10
DNAJC25
URB2
TAF5L
TUBD1
RPS6KB1
ATR
SNRPE
WDR46
PFDN6
PUM3
SGO2
DUS2
DDX28
TAF13
GPATCH3
CYB561D1
UBE2C
ATP6V0B
ASPM
TFB2M
CNST
CDC6
CSTF1
AURKA
SECISBP2
DDX49
COPE
CCDC115
EIF3C
MDN1
DDX21
PCOTH
MIPEP
ZNF497
ODF2
DIMT1
RNASEH1
UTP4
DERPC
CHTF8
FAM227B
DTWD1
EIF3CL
SHQ1
TADA2B
CCDC96
CBWD5
INTS7
DTL
MAK16
MRTO4
EMC1
IPO11
RDH5
BLOC1S1
TRMT61A
DDX19A
COG7
WFDC3
DNTTIP1
IMP4
PNPT1
IREB2
WIPI1
TRMT61B
BUB1
ITGA7
PUS1
MCOLN1
HM13
LSM12
G6PC3
VAC14
GATB
RBM28
ATG14
CBWD3
TTLL9
SRPRB
GFM1
PBRM1
GNL3
RRS1
ADHFE1
RTBDN
UTP15
ANKRA2
C6orf89
C5orf51
LOC101928764
LAMP1
CREBRF
ZGRF1
LARP7
ARMC2
FBXL13
ARMC10
CEP55
ZFYVE1
TRMO
TRIP12
FBXO36
TRAPPC6A
BLOC1S3
PWP1
LSM5
CENPS-CORT
CENPS
KNL1
DIAPH3
BRCA1
MRM3
GLOD4
NOL10
MFSD1
TSFM
PAXBP1
PPRC1
NAGK
KAT2B
IARS1
KDM5B
TTLL11
DCLRE1B
AP4B1
TFIP11
PINX1
DYNLRB2
CDC25C
ITGB3BP
EFCAB7
DPH2
KLHDC4
RBKS
BABAM2
HSPA9
DYNLL1
MARCHF8
NPM1
SNRPD1
BBS5
ECSIT
THADA
DHODH
ENDOV
PRMT2
TWNK
MRPL43
ATAD2
OIP5
NUSAP1
XRN2
STIL
FDX2
FARSB
MRPS23
SYNJ1
USP32
MRPS35
NKX1-1
SSBP1
TSEN54
CASKIN2
CFAP298-TCP10L
CFAP298
DDX42
CCDC47
PRMT1
RAD18
AVL9
QTRT2
CCDC191
MRPL3
CRBN
TASOR2
TOMM40
NEMP1
ANAPC10
ABCE1
E2F3
VRK1
CBWD6
CFAP410
YARS1
S100PBP
WDR36
GTPBP4
COMMD4
NOTCH2
BARHL1
HMGB2
TTLL4
POLR3F
DZANK1
CASC3
CCDC146
RCL1
SETD4
VPS50
HEPACAM2
DUS3L
CDCA8
C1orf109
PSMD9
HPD
ZBTB9
AEN
RUVBL1
LRRC59
PCNA
MVK
INSM2
NRL
STK11IP
RIOK1
CAGE1
PPIL2
AP5Z1
IFT57
SLC25A51
NDUFS7
CENPN
MARS2
NOC4L
DDX51
SUGP2
ARMC6
USP30
AXDND1
ASF1B
NTAQ1
ZSWIM8
CHCHD1
TSR3
RPUSD4
GNPTG
FAM118B
INO80
RPIA
HIPK1
FAM200B
MMUT
CENPQ
RRP1
NRAS
RTEL1
SECISBP2L
ADPRS
RTF2
UBA52
STMN3
MRM1
PISD
MRPL4
ARFGEF2
PARPBP
NUP37
CDC37
MKI67
PPIH
L1CAM
TDG
STYXL1
MDH2
C8orf33
TAF4B
TEKT2
ATP6V1C1
MPHOSPH10
MCEE
CPEB4
LARP4
FAM186A
FBXO32
HSDL1
DNAAF1
CKS2
TFPT
PRPF31
HSP90AB1
HSPBP1
BRSK1
GNL2
ESPL1
GMNN
TSEN2
NUP107
CENPM
PDE8A
TOMM22
TMEM199
POLDIP2
GLRX5
ZSWIM9
LIG1
SLC37A1
SKA2
PRR11
GTPBP10
EEF1E1
ZBTB17
LTN1
RPSA
PDXDC1
ABCF1
TSN
SEC14L1
SLC39A6
ELP2
TIMELESS
RPS29
UBN2
UTP23
DHX33
NBPF15
CWC25
KLHL32
MEA1
MED20
BYSL
DNA2
C12orf45
PARD6B
NUP35
GAR1
SOD2
RNMT
FAM210A
ZNF593
C1orf232
MTR
SKIV2L
NELFE
REXO4
ADAMTS13
SSNA1
ANAPC2
PTRHD1
CENPO
FAM174A
PRKAR1B
OXNAD1
DPH3
PPT1
ARID3B
INKA2
ADAT1
SAR1B
YDJC
CFAP299
CCDC116
DDX20
NET1
WDR43
LAP3
IQCG
TXNL4A
DCAF11
PHB2
SDAD1
PFDN4
SLF2
PPIL1
XPO5
POLH
AP3D1
TMEM231
TIMM23
FAM187A
EFTUD2
CCDC103
POMZP3
LARS2
CELSR3
PACRGL
TIMM23B
PARG
REXO5
ERI2
ADPGK
WDR61
IQCH
AAGAB
TEX14
RAD51C
SRD5A1
NSUN2
ADK
STX18
ZBTB49
LYAR
STAM2
TOR1A
PWP2
LOC102724159
ASNS
WDHD1
SOCS4
KIF14
GDAP1
DHDDS
ZNF202
TXLNA
COPS7B
PALB2
DCTN5
FKBP3
FANCM
SLC35C2
PC
NGLY1
ZNF529
ARHGAP11A-SCG5
ARHGAP11A
LSG1
RBM48
PEX1
CLTC
BRIP1
CNPY3
NEU1
SPG21
CFDP1
APPBP2
CARS1
ATP6V1H
SF3A3
STAT1
DDX18
POLR1F
SPC25
SUPT7L
SLC4A1AP
RSPH1
TTC7A
MCFD2
COX14
TMED5
CCDC18
CNOT4
STAT3
LAMTOR5
NCLN
EIF2S1
ATP6V1D
HSPH1
NDUFS3
KBTBD4
RPF2
TOM1L2
DRC3
WDR81
EIF2B3
E2F8
SARS1
TRMT5
SLC38A6
TMEM242
CRCP
TCTN2
ASH1L
SPTLC1
WDR3
GDAP2
EBAG9
SPATC1L
NOLC1
KLHL12
SNAPC5
RAD9A
EIF4H
SLC25A32
DCAF13
NCL
UBIAD1
FKBP1A
STX16
NOB1
NUDCD3
ERLIN2
CENPF
DBF4B
TMEM150A
WDR53
FBXO45
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
YIPF3
POLR1C
ZNF718
KTI12
MAP3K7
TSGA10
CDK5RAP1
SPRYD4
SLF1
KIAA0825
RIOK3
PABPC1
INTS12
GSTCD
TBL3
BRIX1
TRIT1
NHP2
BZW2
CEP162
RPL6
CLUAP1
H4C15
THAP5
DNAJB9
RRP9
PARP3
SLC25A46
PPIL4
DIABLO
RECQL
GOLT1B
B3GAT3
SETD6
MYBL2
ANKMY2
WDR27
C6orf120
ZHX1-C8orf76
ZHX1
ING5
RSL1D1
EIF1AD
BANF1
TFAP4
NDUFAF5
ESF1
CMSS1
AATF
CACTIN
MRPL21
IGHMBP2
FAF1
UBE2Q1
SAP30
TTC23L
AP3M1
MRPL1
PES1
UBE3D
DOP1A
POLR3B
DSCC1
C16orf90
TTC4
MTCH2
CSNK1G1
RHEBL1
COG2
PGK1
PARL
L3HYPDH
JKAMP
NCBP2AS2
NCBP2
ZSCAN22
PAK1IP1
C6orf52
TBC1D30
APOM
RPUSD2
CCDC32
NDUFV1
VPS37A
CNOT7
BAG6
USP35
KCTD21
TRMT44
FAM214A
ARCN1
LOC112694756
STX6
HJURP
TIMM44
MOCS3
DPM1
CZIB
ATP5F1E
PTPN11
SPATA33
ZNF771
VPS53
ATG101
LONP1
CATSPERD
ANAPC1
ZNF76
VPS11
NDUFAF4
GOLGA3
CCT5
ATPSCKMT
RANGAP1
IFT172
LMLN
NOM1
ATAD5
AOPEP
BNIP3L
SIKE1
ZNF408
ARHGAP1
SYS1
QSOX2
SAP30BP
RECQL5
RXYLT1