ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424141 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◣ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
MTRNR2L1
FRG2C
ZMPSTE24
NDUFS7
KLHL22
CCDC200
METAP1D
UTP20
NPAS4
ZNFX1
QTRT1
UBE2L3
YJU2
NUP214
USP17L20
USP17L22
GAGE2B
SERPIND1
TRMT1
NACC1
RBM19
RRP15
HTR5A
KLHDC9
USP35
KCTD21
WASHC2C
FAM72C
FAM72A
KLHL18
KIF9
PRAME
METTL1
EEF1AKMT3
CYP27B1
VARS1
SPATC1L
CASC3
STAT6
ST7
WDR4
FAM72B
NME1
GBA
NCLN
WDR74
POLR3D
POLR2J3
FRG2
PPIL2
GRWD1
NLE1
UTP25
PSME3
CRNKL1
CFAP61
UFD1
CDC45
URB1
CCDC86
MRPL27
EME1
OSCAR
NDUFA3
CYP4F11
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
GNL2
LARS2
USP2
EIF2D
DDX21
C16orf71
ANKS3
MUC3A
C16orf46
SCFD2
SSBP1
AJUBA
HSP90AB1
BCAR1
FAM72D
CMIP
LTV1
WDR46
PFDN6
NUP155
ZNF335
RAB42
MTFR2
ATXN7L2
FANCD2
SLC12A9
PAXBP1
MIS18A
FABP6
EBNA1BP2
CFAP57
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
EXO1
RAB11A
LZTR1
FCMR
NKX1-1
POLR3E
GOLM2
GPATCH4
DPP9
PDE4A
RRP12
POC5
DNAJB12
BRD7
CYB561D1
RPSA
GAGE12G
GAGE12J
CCT2
TRIP13
BRD9
CRKL
TOP3B
ABCF1
ARCN1
COL23A1
TRUB2
COQ4
TTC27
TMEM248
NUF2
SLC38A7
MRTO4
EMC1
MRPL40
HIRA
UBFD1
EARS2
NDUFA2
IK
GAL3ST4
YDJC
CCDC116
PIGU
SELENOH
ZCCHC24
CDC6
ATP6V0B
DPH2
OPRL1
LKAAEAR1
DHX37
BRI3BP
FBXL13
ARMC10
ADPRS
TEKT2
VPS37D
GTF3C4
DDX31
AP5Z1
SPAAR
KLF16
P2RX6
SNRPE
EPB41
C8orf49
UNG
ALKBH2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RTBDN
DUS3L
TRIM7
SUMF1
SMAP2
RAD54L
VPS33A
TRMT2A
RANBP1
CDK7
CFAP410
CFAP299
SHCBP1
CCNB1
WASHC2A
ZNF593
C1orf232
SEC13
ZNF598
MCM7
AP4M1
IQGAP3
NBPF1
ZNF202
TKT
ZNF839
MDN1
EBI3
PUS1
PGBD5
NBPF15
AKR1A1
THAP7
MAN2B2
LIN28A
ZNF74
ATP6V0E2
ERMN
SMYD5
TBRG4
LUC7L2
FMC1-LUC7L2
FMC1
CLTCL1
ANGPTL6
PPAN-P2RY11
PPAN
C8orf37
SLC29A3
RABL2B
SPATA25
CTSA
NEURL2
HCFC2
GLT8D2
SF3A3
PLIN3
COMMD4
HPCA
ACOT7
ERVH48-1
RBM28
LRRC59
YIF1A
TMEM151A
GPATCH3
TWNK
MRPL43
ARID3B
IREB2
KAT2B
POLR2J2
KCNK5
SNX16
TRIP4
TTC26
USP17L18
USP17L11
USP17L21
USP17L12
RPP40
VPS50
HEPACAM2
ARFGEF2
AARSD1
NOC4L
DDX51
NMNAT1
LZIC
RPS26
SZT2
MED8
TBX1
SHF
LGR6
SPCS1
GLT8D1
LAMP1
LPIN1
C12orf66
LRRC29
PEPD
FZD1
YIPF3
POLR1C
GGT2
SLC27A4
TROAP
PRMT1
PSMD9
HPD
CRCP
NOM1
SMN2
SMN1
EDC3
KCTD9
CDCA2
RRM2
NEIL3
CYB5R4
SUPV3L1
GTF2H2
ZNF771
IQSEC3
ACTR6
PLK3
TBCD
PI16
FBXW8
EIF2B3
ALKBH8
NOL8
CENPP
HAGH
FAHD1
DCXR
BCAR3
PMS2
AIMP2
PNO1
WFDC3
DNTTIP1
ESPL1
RBM34
TMEM191B
AURKB
PRMT5
NAGPA
ATP6V0D1
AGRP
QTRT2
CCDC191
ZSWIM8
CHCHD1
STX18
SUPT7L
SLC4A1AP
RAD9A
PAQR4
KREMEN2
CLIC3
ZFPL1
CDCA5
TMEM262
DLGAP5
ZGRF1
LARP7
DHDDS
MRPS28
C12orf43
NOS3
TBL3
CZIB
ULK3
MARCHF2
TRMO
KAT5
USP36
TMEM120A
SLC6A19
GATB
FPGS
ATP5MC2
POLG
MCRIP2
METTL26
SPNS1
MPHOSPH10
MCEE
CENPH
ATAD3B
ZBTB17
RFX1
GTF2H4
TLCD5
GAGE2A
TADA2B
CCDC96
WBP1
INO80B
SLC19A1
TRAPPC9
TRIM44
CENPS-CORT
CENPS
INO80
MED20
BYSL
SWSAP1
GTF2H3
EIF2B1
TIMM44
TRIM41
DHX40
GSN
CFAP298-TCP10L
CFAP298
RAB14
RPUSD4
FAM118B
TOMM22
CNOT4
COASY
RIMBP3C
RIMBP3B
CCNG2
HSPA9
GOSR2
RDH5
BLOC1S1
ITGA7
RNF151
CCNC
PSMB3
PCGF2
RPS2
ATG14
GFM1
TRIAP1
SUGP2
ARMC6
DBF4B
RNF121
LOC100133315
PSMC5
FTSJ3
ARPC3
TNPO3
CLPB
AHDC1
NPTXR
APOM
BAG6
MRPL45
NOC2L
KLHL17
UBE2I
DPH1
RTN4RL1
MRPS15
FAM86B1
SNRPD2
QPCTL
CEACAM16
TOMM40
EIF1AD
BANF1
RPL5
NOP16
HIGD2A
POMZP3
SRD5A1
NSUN2
ZBTB45
RBBP5
KIF2C
RPIA
MED15
ECE1
SACM1L
PINX1
KTI12
CBLL1
ERICH4
DMAC2
SLC25A12
SPINK4
ZNF778
RRS1
ADHFE1
STAM2
BMS1
DDX41
SRRD
HPS4
CEP85L
KLF1
GCDH
TRAIP
PSMA1
HSPBP1
BRSK1
TFB2M
CNST
KLHDC4
PAK1IP1
C6orf52
GSTA4
BCL3
ZNF391
KRBA1
HSPA6
LDLRAP1
NLGN3
SGO1
CEP135
ZNF529
EXOC2
RPP25
FANCI
TTK
KNOP1
PRKAR1B
STX6
GFI1B
TSC1
RPS8
XRCC2
MRPS23
AGFG2
CCDC77
NEU1
KDM5A
DSTYK
MAK
RABEP2
PPM1F
SFSWAP
UTP3
NADK
TNFRSF1B
PTMS
ZNF408
ARHGAP1
ALG1
N6AMT1
C16orf87
CTU1
CCDC97
ZCWPW2
AZI2
SNX29
MDGA1
RAD51
RNF166
CTU2
TSFM
PPIH
SH3BGR
LCA5L
ANP32E
CYRIB
KCNH2
PGLYRP4
HAPLN2
NEK2
MAD2L1
ACOX3
VTA1
NMBR
THADA
TIMM23
SLC3A2
SLC24A1
FDX2
TFPT
PRPF31
NTMT1
MRPL30
MITD1
ACTRT3
MYNN
PAK4
KIF20A
BRD8
UBXN11
TAF13
DDX49
COPE
NDUFS3
KBTBD4
RPL23A
RAB34
VAC14
TMEM242
TTC4
LRRC37A3
DLAT
SLC25A26
POU2F1
C6orf89
BARHL1
MRPL1
ANKRD36
UBR3
METTL5
TPP1
EIF3C
EIF3CL
ZBTB9
TRIT1
TTC16
PTRH1
PSMD14
FOXD2
POTEF
POLR1B
SHOX2
RSRC1
ZNF165
ZC3HC1
HACL1
BTD
SLC43A3
MCM10
NOL10
MGAT5
DGCR8
PDE4C
PRRT1B
OGDH
ECSIT
MVK
ZSWIM9
LIG1
MYBBP1A
PDAP1
BUD31
RPL32
AMPD2
GNAT2
IARS1
DDX42
CCDC47
PHB2
ZNHIT6
CCDC113
BCL7B
TELO2
PTX4
METAP2
RNF40
CCDC189
MCOLN1
RRP1
ZSCAN22
SMG7
PCP2
SMTN
XAB2
NR1H3
ACP2
PBLD
HNRNPH3
PLEKHG2
HEXA
NDUFAF6
CCNE2
MEA1
RNMT
FAM210A
ATP6V1H
DOHH
GTF2H2C_2
GTF2H2C
ZSCAN21
RPL37
C5AR1
SPOCD1
C3
C5orf51
SPRYD4
EEF2KMT
WASF2
ANAPC10
ABCE1
SLC25A46
FAF1
PPIP5K1
CKMT1B
SF3B5
RPGR
RBM42
PHF19
C17orf75
RABGAP1
MYL6
BUB1B
NOL7
CBWD5
CBWD3
CBWD6
RPS29
RBM48
PEX1
CSNK1G1
ATAD3A
EIF3E
MRPS17
CTNNB1
PRPF40A
ARL6IP6
RPS3A
MAP3K8
TSPAN32
C11orf21
GUCA1B
USP17L19
TIMM23B
PARG
ISOC2
IPO4
TTF2
DDX11
INTS7
DTL
SRPRB
YARS1
S100PBP
TADA3
ARPC4-TTLL3
ARPC4
ETS2
RAPGEF2
BTN3A1
BORCS6
MUC5AC
EXOSC5
BCKDHA
KNL1
SYNJ1
SSNA1
ANAPC2
SETD6
TOP3A
SMCR8
RPS27
RAB13
CNOT6
MACC1
NOL6
IFT172
ZWINT
KRIT1
ANKIB1
CHMP7
ZSCAN30
PRRT1
PPT2
AIG1
CHST12
HSF5
DDC
KIF18B
SLC25A51
LONP1
CATSPERD
MRPL24
PARP6
CCDC24
MAPK1
RABL2A
BBS5
NUDT1
MRM2
MED23
RER1
MORN1
SPATA2
RPL38
RTL10
GNB1L
RPL34
HEATR1
CACTIN
IPO13
PITHD1
CD248
PLK4
CDK1
CCDC146
AP3D1
RPS19
TMEM9B
CCDC34
NR1H2
STT3B
CIZ1
HDAC1
MINK1
KIF23
WDR62
THAP8
ITGB3BP
EFCAB7
FAM187A
EFTUD2
CCDC103
SLC33A1
TIMM17A
DRG2
PRRC2B
ZSCAN25
NDUFAB1
GPN2
HMGCR
ZNF485
TPM4
EPOP
PPP6R3
CCNA2
POLQ
CDC37
SLC35E1
KDM3A
RIMBP3
SPDEF
SEMA6B
FBXO5
IPO11
NSUN5
MOB3A
IZUMO4
RPS5
BICD2
SLC35E2A
SLC44A1
MICALL2
SP8
TRMT6
MCM8
TMEM199
POLDIP2
RABEPK
TOMM6
LSM2
PRDX1
SNRPF
CATSPERG
AURKAIP1
FAAP20
DR1
ERBB3
TNNI2
AKR1C2
KIF15
KIAA1143
LYRM4
FARS2
SNRPD1
NOB1
SNRNP200
MAD2L2
H6PD
ILF2
SDF2L1
ZNF561
FBXW9
XKR7
LSM5
AVL9
PPT1
NDUFB2
FNTB
ASB8
UBL5
FANCF
PPP1R13L
POLR1G
MRPL42
C19orf53
TTC21B
ZNF487
EML2
ODF2
TEX46
KDM1A
TSSK6
NDUFA13
TTC21A
GORASP1
CCZ1
TMEM191C
HMOX1
SPACA6
SKA3
MRPL57
MARCHF8
AXDND1
NPC1
MAN1B1
PTCD2
MRPS27
SEPTIN5
GP1BB
FBLN2
KDM5B
DDX46
THBS3
MTX1
FAM207A
CPPED1
OVCA2
TNFRSF1A
GNG8
APLP1
UCP3
MOK
DNAJC25-GNG10
DNAJC25
RBKS
BABAM2
WDR36
P4HA1
UBE2G2
TIGD5
EEF1D
GFM2
MRNIP
DCAF10
RCCD1
LRP8
CALM2
PPP2R5A
SNAP29
PI4KA
MST1
RPL7L1
GTPBP3
ANO8
PDLIM2
FIBCD1
ENDOV
GTPBP10
FLAD1
PRMT3
H3C2
H4C2
RAB5B
LAMTOR3
H2AC4
MRPL55
PXK
PHACTR4
MCTS1
TJP3
NUDT15
LTN1
UBE2Q1
TPRN
TMEM203
NDOR1
EXOSC3
MARCHF7
DNAJC28
ISG20
VILL
TFIP11
RTF2
NUP35
SLC39A11
RBSN
BOD1
LOC100287896
LIPT2
BIRC2
IKZF4
ANXA2
SH3GLB2
SLC9A1
CHMP6
DPP3
PSMB7
SIRT4
SNIP1
DNALI1
BRK1
PPIF
DGCR6L
METTL14
TTI2
TGFB1
ZCWPW1
MEPCE
GYPA
XPO5
POLH
PC
PCNP
TBCK
AIMP1
CACNB3
VWA7
SYNPO2L
TMEM186
PMM2
SULT1A4
SULT1A3
ZSCAN2
KLHL20
SLC35A2
PKD1
PSENEN
IGFLR1
FOXS1
WASHC5
NSMCE2