ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089504 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◣ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

MAMDC2
PSMD6
BCAS3
HEATR6
BRIP1
NPAS4
TRIM37
ARFGEF2
PARD6B
APPBP2
TUBD1
RPS6KB1
DYNLRB2
UNG
ALKBH2
PFDN4
NCOA3
FBXO32
SMG8
IQGAP3
SLC12A9
USP32
HTR5A
NAGPA
SCRT1
BCAS4
ZNF217
FBXO5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF331
IPO4
TRIP13
BRD9
LOC101928764
ZFYVE1
PPM1D
MTFR2
TEX14
RAD51C
C3orf14
DCLRE1B
AP4B1
KLHDC4
CCT2
MUC3A
ATG14
MCM7
AP4M1
NOTCH2
TROAP
HSF1
BOP1
C12orf66
FANCI
CRBN
XKR7
BIRC5
SKA3
MRPL57
RAD54B
FAM72B
SFSWAP
CREBRF
DZIP3
CIP2A
FAM72C
FAM72D
PPP1R16A
FOXH1
KPNA2
TSR3
GNPTG
TRMT61A
OAZ3
ZFPL1
CDCA5
TMEM262
TTF2
FAM72A
SGO1
TTK
MOK
CCDC200
HCFC2
GLT8D2
BARHL1
RBM48
PEX1
POLR2J3
UTP20
FANCD2
TACO1
NTAQ1
LTV1
EIF2D
TRIM33
GTF2H3
EIF2B1
IQSEC3
DHX40
UBE2C
SIKE1
TMOD3
VPS50
HEPACAM2
FAM214A
CCDC86
MAPK8IP2
TICRR
POLQ
ATXN7
THOC7
MIS18A
RFC3
XRCC2
DLGAP5
C8orf33
MCM10
NCAPH
HIPK1
URB1
WASHC5
NSMCE2
RRM2
DHX37
BRI3BP
PTRHD1
CENPO
LRRC29
PGBD5
TTLL11
NUDT1
MRM2
RNF166
CTU2
TSEN2
BLM
TBX2
RAD18
SLC37A1
METTL3
RSPH1
MOCS3
DPM1
SUMF1
KIF14
RACGAP1
ZC3H18
TMEM150A
NAA25
ENTPD5
BBOF1
METTL2B
TONSL
CPLX2
FAM227B
DTWD1
ATP6V1C1
PHTF1
RAE1
BMP7
METTL1
EEF1AKMT3
CYP27B1
RNF40
CCDC189
DNAH7
SAP30BP
RECQL5
RMDN1
CPNE3
RRP12
CCT5
ATPSCKMT
SMYD5
BUB1
CEP128
ANGEL1
MYL12B
C16orf46
RBM19
VRK1
NGDN
ZEB1
ZAR1L
BRCA2
MED20
BYSL
YPEL2
RAB22A
MND1
RTKN2
NEIL3
GFPT1
RBM28
PIP4P2
ANGPTL6
PPAN-P2RY11
PPAN
KLHL36
EXO1
TMEM186
PMM2
POLR2J
SLC45A3
TRMT61B
RABIF
LYSMD2
TMOD2
PDXDC1
SRPRB
TTLL5
ERG28
NME1
TRPM7
VARS1
NHP2
METTL2A
MTMR14
TBC1D13
NBPF15
EIF3C
EIF3CL
SPPL2A
MED13
PDE4DIP
RNFT1
CYB561D1
AEN
TCTN2
LIX1L
CCNB1
RECQL4
LRRC14
POC5
CENPA
CDT1
MRPS23
TOP1MT
TBRG4
NKX1-1
AXDND1
CYC1
BICDL1
VGLL4
BZW2
ANKMY2
PTPN1
ZNF696
NGRN
SRD5A1
NSUN2
GNPNAT1
CDK1
TMEM251
MOAP1
SPATA25
CTSA
NEURL2
ATAD2
MLYCD
CAPZA2
CHID1
AZIN1
C16orf71
ANKS3
GTPBP10
MRPL11
METTL6
EAF1
CUL2
L1CAM
CNPY3
CCNA2
TASOR2
SLC35B1
OSTM1
SURF2
SURF1
INKA2
DDX20
NET1
IFT88
TRIM48
NEK2
SARS1
SLC25A13
NOMO3
PPM1E
KIF18B
INSM2
LRPPRC
WDR35
STX7
MCRS1
CAMSAP2
WDR43
SAXO2
EFL1
MARCHF9
CDK4
EAPP
RRP15
BUB1B
NOP16
HIGD2A
CCDC146
PLK1
SLC25A24
GINS2
SMC2
C6orf89
LMTK2
VPS13B
NOM1
COPS3
NAA20
MKI67
UTP23
ACOX3
ZNF778
RFC2
GABPB1
DLST
SPG7
SLX1B
SLX1A
BOLA2B
BOLA2
MON2
ABTB1
CKAP2L
TTC27
NDUFAF6
CCNE2
NDUFV1
MBTPS1
TBK1
XPO4
ATP1A1
TADA2B
CCDC96
RIPK2
ATL2
TSR2
SNX16
NOL6
THBS3
MTX1
NOL8
CENPP
UFD1
CDC45
KIFC1
EEF1E1
PES1
AOPEP
FBXO33
IDH3A
VANGL1
DYRK1B
SKA2
PRR11
ATG101
POLR2K
FBXO43
FRG2C
ZNF212
NDUFAB1
AURKB
POLR1B
NOL10
DDX42
CCDC47
HSDL1
DNAAF1
TMEM183A
KCNH6
AGFG2
ZNF367
FRAT1
NBPF1
KNOP1
INTS2
ZNF79
MYL12A
PIGH
ZFP41
MET
DDX49
COPE
LSG1
CFAP69
RRP1B
HSF2BP
MTPN
LUZP6
TEX2
GPSM2
RNASEH1
ZNF688
NEMP1
FKBP3
FANCM
CFDP1
INTS1
WDR4
ESCO2
CCDC25
EXOC3L1
E2F4
TSFM
SPTLC1
UMPS
RPS23
ATP6AP1L
TPTE
TRMT1
NACC1
RPP40
MFSD1
NRAS
TBC1D30
RBM8A
KPNA1
LSM8
CPLX1
RAD51
RUVBL1
TRMT44
RNF114
CALM1
MFSD5
SIK1B
SIK1
TMEM18
HAUS5
SPNS1
SND1
DUS4L-BCAP29
DUS4L
COG5
PSMD12
KLF10
SLC39A4
CPSF1
PIAS3
FRG2
GTSE1
THAP5
DNAJB9
SH3BGR
LCA5L
AP4E1
GPR89B
SEC13
TMEM249
SLC52A2
FBXL6
TECPR1
C11orf24
C14orf28
SPAG9
HELLS
DUX4
PDIA4
CKAP5
CENPW
EIF3B
WASHC2A
FDX2
EBAG9
RXYLT1
ZC3H3
GDPGP1
CIB1
SCRIB
GPATCH4
DUS2
DDX28
ZBTB9
GLRX5
TMEM231
DYNC1I2
YIPF4
TEDC2
SPEF2
SGO2
RPS29
FRAT2
FAM207A
LRR1
CSRNP2
HAGH
FAHD1
LSM5
NAGK
GSN
SEL1L
TAMM41
NUP160
AP3B2
CSDE1
MDM1
CMBL
CSTF1
AURKA
SPATA33
GPR89A
RHBDD2
SLC25A19
LMAN2
SF3B4
CENPBD1
GET3
VPS4A
TRAPPC10
RAD9A
SLC25A36
TSEN54
CASKIN2
DNAJA3
RFC1
PPP1R12B
TOX4
RAB2B
SUV39H1
SUPT4H1
MYO5C
FBXW9
TPRN
TMEM203
NDOR1
DOLPP1
COQ2
POLG2
OXR1
KLF1
GCDH
POLR2J2
H1-10
STK3
KIF6
MTRNR2L8
C12orf45
C1orf54
APH1A
TDRKH
GCSH
C7orf50
CCNG2
FBXL13
ARMC10
PRKAR1B
HEATR5A
TRIM4
ZC3HC1
L2HGDH
DMAC2L
METAP1D
COG7
LTN1
DDX46
DSTYK
USP14
GAL3ST3
SF3B2
DDX11
WDR81
ADCK1
NME2
PIF1
LEO1
SH3BP5
SLC27A2
CENPN
RHNO1
FOXM1
SPC25
THUMPD3
BDH1
CEP135
ATP5F1E
RBM42
STOML1
PML
INCENP
CIT
TUBB3
RNF19A
PSMD5
COX6C
FBXW8
MED23
MAX
TMEM39A
NANS
EMC8
COX4I1
WDR97
MAF1
DLD
GPR135
PTGFRN
NUP107
GOLGA3
PHF5A
ACO2
POLE3
C9orf43
NUDT4B
NUDT4
GUSB
PIP4K2C
ABCA5
LINS1
ASB7
NR6A1
P2RY2
KCND3
KAT2B
MCCC1
TIGD5
EEF1D
ERAL1
SNRPC
CRIP1
TEDC1
MDM2
MED6
CNKSR3
PARP10
GRINA
ATR
EPN1
ARMC2
PSMG4
ATG7
ATXN1L
TEX10
NEK11
ASTE1
LCMT1
VKORC1L1
MAD1L1
CYB561
TRIP4
PLK4
MEA1
CDC14B
LRFN4
CYP51A1
DUSP12
GNA13
TAF1C
ADAD2
FAM13B
SLC35A1
TRAPPC9
CAPN7
ZNRD2
FAM89B
UBE3C
KRR1
DENND2C
GREB1
MRPS35
ZSWIM9
LIG1
DPY19L4
POM121
CLPTM1
OTULIN
GABARAPL2
TOR1B
ATP5MG
SRRT
UBR5
ATP9A
HSP90AB1
ADPGK
ZNF408
ARHGAP1
NUFIP1
GPALPP1
PDSS1
TMEM129
TACC3
BAZ1B
MAP3K3
HPCA
PRMT6
KIF20A
BRD8
STYXL1
MDH2
DBF4B
EXOC2
TAF3
CLCC1
GFOD2
FPGS
AP1G1
LIN54
ANKRD28
CLPTM1L
SPRYD7
SOS1
RHPN1
RABL2B
C5orf51
ANAPC7
NIFK
LSS
CBLL1
HERC4
RPL32
XPR1
SENP5
CLBA1
PDP1
USP6NL
TFIP11
UBE3D
DOP1A
MXD1
C12orf65
PSMB7
SLC35A2
KIAA0319
VPS33A
ASPM
PNPT1
MRPL3
RAB14
BMS1
LTO1
RFWD3
C17orf97
SNRNP25
POLR3K
TRIM39-RPP21
TRIM39
TBL2
EML4
E2F7
BCAS1
DYNC2I1
RTBDN
TRIAP1
TOMM40
PWP2
LOC102724159
WDR3
GDAP2
STX6
QSOX2
PEX3
ADAT2
FANK1
CDK5RAP3
MYBL1
SPATA2
NUB1
SPAG1
SLC25A44
ZNF275
UBXN11
SUPV3L1
REXO4
ADAMTS13
EEF2K
FAHD2A
GALK1
GLRX3
PLCL1
SMAGP
ALDH1A3
VTA1
NMBR
EEFSEC
CGGBP1
TNFAIP1
IFT20
PNN
TRAPPC6B
DENND4B
CBY3
ZNF654
ALDH5A1
RHEB
GCH1
PDIA6
PPM1H
CACNG4
RABL2A
IPO11
SKIV2L
NELFE
PPIL1
WDR61
TMEM67
POGLUT1
RNASEH2A
PRDX2
NOL11
PRPF3
RIDA
POP1
FANCA
RUBCN
PKMYT1
ALDOA
NFATC2IP
GCN1
USP10
STRN3
AP4S1
PCMTD2
QTRT1
VAC14
THOC3
PNPLA8
CHCHD6
TMEM120B
ZMAT3
TOMM70
LNP1
FANCC
ARL8B
WDR73
NMB
TADA3
ARPC4-TTLL3
ARPC4
STRADA
PHLPP2
CLCN7
TP53INP1
WIPI2
GSTO2
TMEM260
TAF5
PRKAR1A
DDX56
HSP90AA1
ECT2
WDR20
TMEM43
CHCHD4
ZSCAN9
NELFCD
HECTD4
SHCBP1
RPIA
SLC7A6OS
PRMT7
DOHH
PUS7
NDUFV3
MCM3
FUBP3
TKFC
DDB1
CDKN3
LYRM4
FARS2
ZHX1-C8orf76
ZHX1
RHEBL1
BLOC1S2
GOLGA1
TBC1D23
DHTKD1
BOLA2-SMG1P6
ERLEC1
ASB3
MXD3
LRRC6
CNOT10
AKAP9
TTC21A
GORASP1
LLGL2
KCNK12
CDK7
PSME3
EDC3
CHUK
MRPS21
UBL7
TATDN1
NDUFB9
TMEM258
FEN1
SUB1
PPM1G
C11orf80
H3-3B
PRRC1
MAN1A2
GRB2
ATP6V1H
EIF1AD
BANF1
ZFAND2A
SAAL1
URM1
COA8
BAG5
RCE1
LRCH1
ERGIC1
WIPI1
TASP1
POLD3
SERINC3
RMDN3
PIP4P1
USP54
PAPOLA
KCTD13
PRELID3B
ERCC3
PCLO
MAD2L1
DDX19A
XRN2
MVK
TAF4B
NDUFS3
KBTBD4
RRM2B
OS9
TM2D3
SMARCC1
ARSG
VTI1B
SLC16A6
SEC22A
WWP2
SF3B3
COG4
ATXN3
RELB
ACTR3B
MAP11
CLTC
NOB1
PEPD
CENPE
CS
ZZEF1
CYB5D2
AP1M1
TMED10
NCKAP5L
CANX
ZNHIT1
PLOD3
SLC13A3
TP53RK
UBXN1
ACTR2
ARPP19
NBPF11
TMEM184C
WDSUB1
PAPOLG
CDC20
PNO1
SETD4
GNS
METTL9
NCAPH2
LMF2
TARS3
ELAC2
UNC50
COA5
ATG9B
ABCB8
MTERF1
BRK1
RPL30
PSEN1
HES3
R3HDM2
INHBC
NUF2
DNA2
RPL6
PTPN11
FLAD1
CCND3
XPC
LSM3
PMPCB