ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457525 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◣ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

AP5S1
CRY2
VAMP2
PER1
CRY1
CIART
C1orf54
DBP
CA11
AGAP11
ADIRF
PER2
CSDE1
OLFML2A
NR6A1
TRAPPC6A
BLOC1S3
TEF
CLUAP1
C16orf90
DAZAP2
INAFM1
S100A13
S100A1
CHTOP
DUX4
POLG2
DDX5
CEP95
ERCC6L2
PFDN4
MORF4L1
BCAS3
RORC
C2CD4D
CD22
DDX42
CCDC47
SNRPE
NPTN
NR1D1
NOL8
CENPP
PNP
PIP4P1
OSGEP
APEX1
XPOT
KMT2E
SRSF1
LRATD2
TRIM37
RIPOR3
SRSF5
HMGB2
TOB1
FOXJ2
SDR39U1
GSN
ARRDC3
BHLHE40
GSK3B
RNASEH2C
KAT5
PLEKHF2
EIF3B
BCAR1
CCNL1
TRIQK
MAPK1IP1L
PLD6
OSGIN1
PMEPA1
THOC7
ATXN7
FRG2C
PPM1D
EIF5A2
NAA50
ATP6V1A
PRORP
PPP2R3C
BRIP1
COQ10B
RMI1
HNRNPK
SEPTIN2
HDLBP
BCLAF1
TPD52L2
ABHD16B
APPBP2
RBM39
LNX1
HNRNPA2B1
CBX3
USP32
NCOA3
TCF25
ARIH1
EIF4B
ALG13
GNG14
DHPS
TXNIP
FAM76A
PAF1
MED29
YPEL5
IGSF8
PTBP1
IGFBP4
FNBP4
HOOK2
NFX1
SRCAP
LOC730183
RFX3
PRKAR1A
SLCO4A1
SRP9
MMADHC
EMP3
CCDC114
SRP54
TM9SF1
IPO4
TSSK4
PRPF3
RCCD1
EIF1
SLC25A25
NAIF1
TSPAN31
MARCHF9
CDK4
AGAP2
EAPP
TUBD1
RPS6KB1
TMEM187
HCFC1
RNF43
ZNF263
TUBA1B
CLN6
TMEM141
CCDC183
ECH1
ZMYND8
MED13
MAP1LC3B
FBXO31
YEATS4
MCM7
AP4M1
EED
LRRC56
HRAS
SLC20A1
NFYC
ITGB1
POLD1
NR1H2
SLC3A2
MAPK6
UNK
H3-3B
KAT7
BRPF1
NRAS
SREK1
CEBPB
SCAF1
RRAS
PPP2R5C
USP48
HEXIM2
RBM3
HNRNPF
RALGDS
HNRNPC
TRA2A
ZNF687
PTEN
KLLN
NBN
CHMP2B
ARL4D
DDX23
EIF4A2
DOCK6
PCNT
C21orf58
SLC35C2
SYCP2
PPP1R3D
FAM217B
CLK1
EIF5
PPP1R35
ZCWPW1
MEPCE
ZFP91
LPXN
PCIF1
HIRIP3
SPATC1
GET4
LRCH4
FBXO24
SON
GART
STOML2
PIGO
UBQLN1
TMCC1
ZNF335
RFESD
ILF3
UNC13D
TUBA1C
FBXO46
ARRDC4
CAP1
PRKDC
MCM4
PLEKHG5
SERINC3
PKIG
PRSS33
ELOB
PTP4A1
OGFOD2
ARL6IP4
ABCB9
ANAPC7
SKA2
PRR11
TRA2B
AHI1
GABPB2
RIPK2
MLLT11
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
TRMT112
PRDX5
CD55
EPB41
BCAS4
SNX5
MGME1
PDCD6IP
SLC43A2
ZNF24
KIAA0895
ANLN
SLC25A24
SULF2
SRSF4
FBXW4
CYP2W1
COX19
TMEM265
PHKG2
MED26
MADD
ENSA
EGR1
PPIL3
NPC1
NIF3L1
YWHAZ
NCAPD2
MRPL51
ZNF217
HPS5
GTF2H1
MOCS3
DPM1
TGM1
RABGGTA
GPBP1
RNF139
DDX6
ZFP1
PPP4R3B
TMEM251
MOAP1
USP9X
PPP1R15A
PLEKHA4
CALM2
PHB2
TNFRSF12A
THOC6
HCFC1R1
DDIT4
CLDN9
CLDN6
PTCD3
POLR1A
PAIP2
SERINC4
SERF2
HYPK
SARAF
SERTAD3
ZC3H11A
ZBED6
SESN1
CEP57L1
CYTH2
PHF12
SHKBP1
SF3B4
MTMR11
COPS3
BRD2
KIFC1
LAG3
CLTC
WDR6
UBE2M
CHMP2A
PPP1R3C
TBX2
DNAJB1
UTP18
MBTD1
NPR3
MZF1
OSGIN2
MYL6B
MYL6
APH1A
SMC4
MDM2
IFT80
NUDCD3
SYT1
ZBTB7B
LENEP
ISOC2
SETD1A
ORAI3
RPL10
ST20-MTHFS
CD2BP2
CBLL1
DDX59
BOLA2-SMG1P6
HNRNPH1
PLK4
FAM214A
LRCOL1
P2RX2
PPM1A
RNF31
PSME2
EMC9
STAG2
MAMDC2
PPIA
UBE2T
PPP1R12B
FBXL18
KMT5C
C6orf62
SYNCRIP
DDX43
WDR81
TLCD2
GMNN
ANKRD12
SPATA2
TOR1AIP2
TOR1AIP1
PPP1R15B
DUSP1
TMED10
KIF22
ZNF438
POLR1D
LNX2
PNRC1
TMEM116
ERP29
TAF7
PCDHGA1
SRSF6
ADNP2
RCE1
NOP58
RNH1
ARF6
TPT1
UBAP2L
C1orf43
ZZEF1
CYB5D2
TSC22D1
ART1
SYVN1
CREBZF
H4C14
H3C15
H3C14
STX4
UCP2
GNAS
CSE1L
TRIP6
SRRT
CHD1
NPDC1
KEAP1
ENTPD2
MED15
DISP3
RNF13
PNISR
WBP1
MOGS
INO80B
PRC1
EIF2B5
TUFT1
TADA3
ARPC4-TTLL3
ARPC4
CD164
ZCWPW2
AZI2
KRT80
CUL5
TANK
HMX2
BUB3
TIMM22
PRKCI
ZC3H6
TFAP2C
PPP2CA
HARBI1
ATG13
MICALL2
WDR74
STX5
TEDC1
CRIP1
GATAD2A
CRIP2
TSEN54
LLGL2
CASKIN2
TMEM231
GABARAPL2
FNIP1
TMEM69
PPIG
GPBP1L1
CIC
UBA1
TRIM52
DDX19B
AARS1
CACYBP
CHMP3
RNF6
KRT8
SPOP
POLD3
KRT18
GOLGA5
HBP1
CHFR
MTHFD2
RIN2
FLCN
GABPB1
AP1G1
IRF2BPL
LOC102724770
DGCR6
H2AC19
H2AC18
CDIPT
PRMT2
SHISA5
TREX1
STAM2
PNPLA7
MRPL41
LYRM1
DCUN1D3
FAM117B
TEKT3
BCL9L
ZBTB4
TRIM33
TMEM138
SLC35G6
POLR2A
CYB561A3
H2BC21
H2AC21
H2AC20
DARS1
ZBTB8OS
RBBP4
NSUN3
DHFR2
ZNF274
TMEM18
MARS1
ARHGAP9
NTMT1
C9orf50
TFAP4
DHX40
UVRAG
ZNF384
LSM5
AVL9
DPP3
UBALD1
MGRN1
PSENEN
LIN37
IGFLR1
JADE2
JUND
IQCN
PCBP1
NME1
LUC7L2
FMC1-LUC7L2
FMC1
IL4I1
ST6GALNAC2
NUP62
MIB2
LPP
ATF5
EMC2
HSF1
BOP1
TMEM258
PTOV1
IRF2BP2
FEN1
C17orf58
YTHDF3
RAB11A
GSPT1
PPP4R3A
MNT
UBC
THNSL1
TAX1BP1
ACTG1
PARP16
TAX1BP3
EMC6
DMTF1
GABARAP
ELP5
CTDNEP1
AMOTL2
ZBTB21
CLDN7
PMS2
AIMP2
SPG7
TAF12
XRN1
PHF19
TRPV4
LATS1
PRDX6
TM4SF1
CHD4
ACYP2
FANCC
EMP2
CRCP
TSPYL1
DSE
RNASEK
C17orf49
CTDSP2
SENP2
GABPA
ATP5PF
PRPF8
BAZ1A
NKIRAS1
RPL15
TMBIM6
H2BC4
H2AC6
GTF2A1
KLF10
PPP1R13L
POLR1G
TYW1
SBDS
RACGAP1
CSTF1
AURKA
CMC2
CENPN
PRR22
DUS3L
POMT2
GSTZ1
CAPNS1
CUL4B
PIK3IP1
MAP2K7
SNRPA
C19orf54
MAT2A
UPF2
ICA1
ACTB
HNRNPDL
ENOPH1
UXT
ELK1
CEP63
ANAPC13
LURAP1L
H3C6
H2BC8
H2AC8
NUBP1
PTGES3
PSMC5
FTSJ3
ETF1
SPATA17
GPATCH2
BCL2L1
ARPC3
BCAM
RBBP5
H4C15
DNAJB12
SLC2A10
SWI5
HSPA8
GOLGA2
DAGLB
PARD6B
MRPS18C
HELQ
POLR2J3
NR4A2
BCL6
PURB
TRAPPC9
MBTPS1
RNF19A
CSNK1A1
DYNC2I2
EEF1A1
CEP112
ALDOA
PPP4C
CELSR3
PSMD6
C19orf81
ATXN7L3B
ABHD11
RLF
DNPEP
SLC33A1
GID8
DIDO1
HIPK3
GBE1
GDF15
RBM8A
PEX11B
GUK1
GJC2
CNOT2
RPRD2
SLC25A36
ERBIN
PC
TIAL1
ST7L
MATR3
CAPZA1
CHURC1-FNTB
CHURC1
H4C9
H2BC12
H2AC12
TCERG1
SETDB1
TPD52L1
FTH1
PTPN1
TMED1
SLC37A4
PIGW
MYO19
GGNBP2
CMTM4
SLC35A5
ATG3
ANP32B
FOSL1
FIBP
CCDC85B
TNNI3
DNAAF3
NOL11
HIF1A
PHC3
WRAP53
TP53
NAA80
IFRD2
HYAL3
CCDC24
MSH5
DDAH2
CLIC1
ADK
ZFAND2A
DDB2
ERGIC2
SMG9
SHC1
FLAD1
CKS1B
BCL7B
MTCH2
UQCRC2
WDR13
SDHAF2
RAB5A
EFHB
CPSF7
NR4A1
RFWD3
ARMC8
U2AF2
CCDC106
ZNF791
ZNF490
WTAP
SOD2
SMIM41
ATG101
SHOC2
IFT46
BBIP1
ARCN1
CIPC
HIPK1
USP8
PGP
E4F1
BRICD5
G3BP1
FAF2
KCNIP2
TXN2
ZAR1L
BRCA2
RPN2
NUP160
NDE1
MROH8
MARF1
BRMS1L
SEPTIN9
KPNA2
TIMM9
KIAA0586
MYL12A
FBXO33
FLNA
EMD
ARFGEF2
FBXO5
SUPT16H
POP7
SDSL
RAD9A
PPP1CA
TINF2
GMPR2
AZIN1
TET3
BANP
SETD3
CCNK
HES4
LSM12
G6PC3
RBM22
SIRT4
KDM6B
TRMO
SCYL3
UBE2B
CDKL3
RPSA
H2BC11
H2AC11
MAPKAPK3
CISH
PSMG3
ZBTB25
ZBTB1
CD58
SLC39A6
ELP2
IFRD1
FBXL19
LAMA5
DIAPH1
ZWILCH
SNAPC5
RPL4
ZNF581
ZNF580
TMEM64
ZNF706
PNO1
TTC3
PIGP
RAB3GAP1
NFE2L2
DDX3X
SNW1
SMIM13
ATF7-NPFF
ATF7
CACNG4
RITA1
DDX54
ELK4
WBP11
C12orf60
YY1AP1
DAP3
SMIM6
SMIM5
CASC3
MCM9
COPB2
ZZZ3
RBBP6
STK40
MFSD11
SRSF7
SRSF2
DACT3
STRADA
STAT3
FERMT2
IQCE
SHMT2
PMF1-BGLAP
PMF1
HOXC9
HOXC8
HDAC4
DOP1B
RGS9BP
ANKRD27
CAMSAP2
ZNF627
MLF2
IP6K2
SLC2A4RG
LIME1
MAF1
CYC1
FAM53C
CDC25C
WDR97
SLC25A40
DBF4
GAS2L3
ZMYM5
RND3
SLC35B1
LRIF1
BZW1
PPFIA4
MON2
CLK4
PPP6C
MRPL35
IMMT
HEXIM1
MINK1
METTL2A
PPP1R37
ING1
CARS2
RPS11
RPL13A
IQANK1
FAM83H
USP36
YARS1
S100PBP
DZIP3
CIP2A
SUCO
MLH1
EPM2AIP1
NOTCH2NLC
PLA2G6
NOTCH2NLB
NOTCH2NLA
NDUFAF5
ESF1
MYH14
CRADD
ERAP1
BNIP1
PSMD5
CENPA
PSMC3
DYRK1B
ANKRD13D
TARDBP
TBL1XR1
MDH1B
FASTKD2
MPC2
DCAF6
CNNM2
CDK19
AMD1
RAP2A
SPG21
RPS19
NEMP1
NAB2
MARVELD2
LDLR
RAN
TASOR
TAGLN2
CBWD5
CBWD3
CBWD6
SNRNP200
EPM2A
CELSR2
PEDS1-UBE2V1
PEDS1
ELF3
TSTD2
NCBP1
TM9SF4
CDC20
PBX2
METTL8
GPSM3
DCAF17
PRRC2C
SETD5
S100A16
S100A14
SEC61B
ATP6V1G1
KLF1
GCDH
DNASE2
ZNF219
TMEM253
SLC39A7
RXRB
RING1
HSD17B8
COL11A2
PRR14
FBRS
KLF9
PSMC1
FUT8
TENT5B