ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457296 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◣ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CIART
C1orf54
VAMP2
PER1
AP5S1
CRY2
DBP
CA11
PER2
AGAP11
ADIRF
CRY1
DUX4
OLFML2A
NR6A1
PFDN4
TEF
RORC
C2CD4D
NR1D1
BCAS3
TRAPPC6A
BLOC1S3
CLUAP1
C16orf90
SNRPE
FZD1
RIPOR3
RNASEH2C
KAT5
GSN
BHLHE40
PNP
PIP4P1
OSGEP
APEX1
PLEKHF2
IGFBP4
PMEPA1
CD22
FRG2C
YPEL5
LNX1
NPTN
PLD6
MAP1LC3B
FBXO31
MAMDC2
RALGDS
SLCO4A1
GET4
OSGIN1
TXNIP
CTDSP2
PTBP1
SLC20A1
IGSF8
PDXDC1
NOL8
CENPP
ART1
RNF43
SLC22A5
EIF5A2
TSPAN31
MARCHF9
CDK4
LOC102724770
DGCR6
FAM76A
TRPV4
SPATC1
LRRC56
HRAS
TRIM37
BAHCC1
MTERF4
MAPK6
CDIPT
MYL12A
CLN6
PHRF1
DOCK6
LRCOL1
P2RX2
BCAR1
SLC25A36
ZFP36
PLEKHG2
PPM1D
CEP63
ANAPC13
MAPKAPK3
CISH
TXNRD1
SETD1B
RHOF
ZMYND8
EPB41
RFESD
PMS2
AIMP2
CTDSP1
MICALL2
CTTN
TEKT3
FOXJ2
UBE2B
CDKL3
NPR3
BMP7
PTCD3
POLR1A
TNRC18
LOC100129484
UVRAG
HOOK2
ARRDC4
CCDC24
CEBPB
LYN
UTP18
MBTD1
BCAS4
PRSS16
GTF2A1
PNPLA7
MRPL41
CSTF1
AURKA
TBX2
POLG2
DDX5
CEP95
FRG2
AVPI1
ANKRD12
BRI3
USP32
SMIM6
SMIM5
PRKCI
MOCS3
DPM1
BCAS1
ARL4D
NEMF
PLEKHM3
PLEKHG5
SENP8
MYO9A
TADA3
ARPC4-TTLL3
ARPC4
GSTP1
DPP3
FAM117B
TMEM116
ERP29
CSDE1
SLC35E2B
TMEM94
MAP2K7
LYRM9
SRP54
DBNL
TUFT1
ZNF285
CMC2
CENPN
NUDCD3
STX4
DISP3
TMEM265
PHKG2
TIPARP
GNB2
DDX42
CCDC47
PPP1R13L
POLR1G
PDE4DIP
TOR2A
NAA80
IFRD2
HYAL3
TNNI3
DNAAF3
PRLH
FLCN
PNO1
GMFB
SLC35E2A
IGFL4
BRIP1
BCL6
RNFT1
GPD1
COX14
LPCAT1
PC
SMIM41
ATG101
TEX14
RAD51C
EIF3B
FAM53C
CDC25C
RNASEK
C17orf49
LRPPRC
EED
DCLRE1B
AP4B1
PRORP
PPP2R3C
SGK3
TMEM260
TPTEP2-CSNK1E
SLC2A4RG
LIME1
HIF1A
VMP1
PTRH2
ISOC2
TIMM22
PTEN
KLLN
RRP36
MEA1
PIK3IP1
MADD
GOLM1
RAD9A
PPP1CA
TBC1D17
PNKP
AKT1S1
KLK13
UQCRC2
NXT1
GZF1
NBPF1
PARD6B
CCDC200
ARID3B
RCCD1
EAPP
TM4SF1
BCAM
MVB12A
SHKBP1
GIPR
TMEM231
GABARAPL2
MRPS23
GREB1
HSPH1
NTSR2
ELAVL3
EMC2
NOTCH2NLC
KCNA2
NOTCH2
NME1
RTEL1
DACT3
TRIB1
RBBP5
SPTBN4
BLVRB
H4C4
H2BC6
HCN2
GRHL2
MBNL1
SPATA17
GPATCH2
EIF4A1
CD68
PAK1IP1
C6orf52
SPAG9
GPRASP1
PPP1R3C
PSMD6
C6orf62
ESYT3
RHOD
VGF
AP1S1
SELENOW
NOCT
CHFR
TRAPPC9
STX16
PDE12
MTMR14
HBP1
TATDN2
SSBP2
TENT5B
RNF223
APPBP2
SLC25A19
TMEM205
RAB3D
CCDC159
TUBD1
RPS6KB1
UNC13D
MEFV
RIN1
ELF3
CD55
POLG
SLC25A41
KHSRP
CLTC
EIF3E
RPEL1
CCT5
ATPSCKMT
ZBTB37
SRA1
SLC35A4
APBB3
ZNF778
CENPA
KDM2A
FAF1
CDKN2C
TRMT12
NCOA3
TCERG1
TMEM53
ARMH1
ATF7-NPFF
ATF7
S100A11
STK35
ILF3
HPS5
GTF2H1
HES4
SLC12A4
C3orf14
VPS11
FNIP1
ZNRF2
ALDOA
FAM214B
CD302
GPR37L1
ZNF687
ZHX2
GPRC5A
MAN2A1
PARP16
PPP1R32
HEG1
RNF13
ATP2A3
KMT5A
TRIP6
SRRT
ARFGEF2
NBPF4
EXOSC5
BCKDHA
WDR62
THAP8
MCCC1
STARD10
NR1H3
ACP2
SIDT1
KHDRBS1
NRAS
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
RPS19
CYP27C1
SLC35A5
ATG3
HSF2
BOLA2-SMG1P6
SLC49A4
HSPBAP1
NPM1
SPIRE2
SLC34A3
RNF224
RNF208
CYSRT1
SPG7
KDM6B
DHX40
PRKAG2
RBBP8NL
PES1
RSAD1
DGKZ
BCAS2
UMODL1
ZNF598
NPW
SIT1
CCDC107
ARHGEF39
SLC35B1
WDR74
STX5
RBBP6
SKA2
PRR11
RPS29
PPP1R10
MRPS18B
ATAT1
PDXK
SULF2
EHMT1
ARRDC1
ACVR2B
UBAP2L
C1orf43
CELSR2
UBFD1
EARS2
WDPCP
MDH1
COA1
DNAJB5
POLD4
PMVK
UCKL1
ZFP62
C1orf174
POLD1
NR1H2
STAM2
AGFG2
SYNGAP1
PHF1
CUTA
SURF4
PLEC
KMT2E
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
KRT8
EPS15L1
NKIRAS1
NR1D2
LAMP1
MTRNR2L1
COMMD8
PER3
CEP112
CLCN7
HOXC13
GTF3A
ERCC6L2
LAG3
MTHFR
CLCN6
ZNF292
RBM39
ZNF718
DHX35
ZNF595
PPL
VPS26A
AP5Z1
DAZAP2
SPG21
CDK12
FOSL1
FIBP
CCDC85B
MUC3A
S100A13
S100A1
CHTOP
MTHFD1L
TRAPPC10
WASHC2A
SNRPA
C19orf54
DENR
LRATD2
SLC25A13
INAFM1
SERINC4
SERF2
HYPK
CAMKK1
TRAPPC2L
GALNS
COL23A1
G3BP1
MRPL40
HIRA
SLC35B2
HSP90AB1
MED1
WASHC2C
RPUSD4
FAM118B
SLC33A1
ZNF331
MORF4L1
ALG13
CREBRF
SPHK2
SPNS1
LAT
NFKBIE
PRDX6
MAPK1IP1L
TMEM185B
B3GNTL1
PRKAR1A
ZNF438
PIM3
SDR39U1
SRSF1
CPEB1
USP8
LSM12
G6PC3
ZNF263
TRMO
XPOT
RGS20
ATP6V1H
SNAPC1
ADNP2
RRAGC
TRIQK
HMGB2
TOB1
COQ10B
NFX1
HERC3
GSK3B
TTYH1
GYG1
LRFN4
SRSF5
MAP4K1
EIF3K
TKTL1
TEX28
ATXN2
PRPF3
THOC7
ATXN7
PSMD5
TMEM18
USP36
GBE1
IP6K1
TPD52L2
ABHD16B
YDJC
CCDC116
SYCP2
PPP1R3D
KLF1
GCDH
FAM217B
DNASE2
TCF25
FAM214A
UBE2Q1
CHRNB2
ABHD11
CCNL1
AFAP1
ARRDC3
ZSWIM1
SPATA25
NEURL2
CTSA
SLC25A25
RAB17
ZNF706
YBX2
GNG14
DHPS
PUM2
COL6A2
EPM2A
SNAP29
PI4KA
SRCAP
LOC730183
SEPTIN2
NAPRT
MROH6
HDLBP
CLN3
APOBR
SCAF11
TLE6
KCNIP2
SUMF1
STAT6
THAP5
DNAJB9
CYP2W1
PAF1
MED29
KDM4C
GGA2
MARCHF8
NBN
SBNO2
ATAD3A
NTN5
HNRNPF
ZC3H4
CNOT3
EIF1
RMI1
HNRNPK
SLC25A26
BCLAF1
NAA50
ATP6V1A
TMEM187
HCFC1
THNSL1
RPS11
RPL13A
ZZZ3
POLI
GABARAP
PPAT
PAICS
HEXA
TM9SF1
IPO4
RRAGB
PRR5L
COMMD9
PPFIA4
SPAAR
HRCT1
COL6A1
PPP1R35
TBCEL-TECTA
TBCEL
RMND1
ARMT1
SLC25A39
H4C9
H2BC12
H2AC12
OPRL1
NTMT1
C9orf50
NFYC
ARIH1
UCP2
EIF4B
CHMP2B
EPB41L4B
CFAP251
MAN2B2
MED13
EFR3B
ZCWPW1
MEPCE
CD164
DPH2
B4GALT2
ATP6V0B
SLC35C2
SETD1A
ORAI3
LFNG
FNBP4
RFX3
UNK
H3-3B
NPIPB15
NOP14
GRK4
SNX5
MGME1
MTCH2
GALR1
SLC3A2
TMEM141
RIMBP2
CCDC183
BTNL9
WTAP
SOD2
BRPF1
LAMC1
ERCC1
NAIF1
DGAT2
ZNF335
TRIM8
CASC3
YEATS4
HNRNPA2B1
CBX3
SRP9
ISG20
MCM7
AP4M1
FOXO6
TCP11L2
LARP1
BAX
TACR2
RGS19
LKAAEAR1
TSSK4
SCAMP4
ADAT3
LCN12
FBXW5
C8G
CIPC
PKD1L3
DHODH
HNRNPH2
GLA
KLF11
RPSA
FAM178B
TMEM52
INO80
CALML6
GABPB2
HDAC4
TSEN34
MBOAT7
COLEC11
CAP1
CLN8
SPPL3
PPP4R3B
CNNM2
VPS33A
POLR1D
LNX2
ILVBL
MAPK15
ITGB1
ZFP91
LPXN
SYNJ2BP-COX16
SYNJ2BP
MAF1
CYC1
MAL2
KAT7
CLK1
ADK
ENSA
USP48
GFRA3
DDX3X
ZFYVE28
CFAP99
TUBA1C
YARS1
S100PBP
MAX
BCL9L
SREK1
STXBP4
PHF23
DVL2
COX11
RNF139
KLHL12
SYNCRIP
MMADHC
RAD50
MZF1
ZBTB7B
LENEP
EMP3
CCDC114
NAPA
TMC4
LGI1
SLC43A2
ZFP1
PCBP1
WDR89
ADGRB1
DDX59
PTPRN2
YWHAZ
XRN2
TBC1D13
AGAP2
IGSF21
GNAS
SLC25A24
PPM1A
SLC39A6
ELP2
THRAP3
L3HYPDH
JKAMP
EIF4G1
SEPTIN9
EIF4A2
CALM2
DLX4
CYB561
CD2BP2
SLC25A11
RNF167
PFN1
TMCC1
MAP11
LAMTOR4
FBXO46
EIF5
GP1BA
HEXIM2
TUBA1B
RNMT
PLA2G1B
FAM210A
PRC1
ECH1
FBXO5
SPATA2
PEX14
DFFA
TJP2
PDP2
NDUFS6
MRPL36
STMN1
LUC7L2
KPNA2
HES1
MLH1
EPM2AIP1
SGO1
COPS7A
SMARCD2
TBC1D15
UBR5
CDK19
AMD1
STOML2
PIGO
ASPH
SON
GART
ARID3A
PDCD6IP
ATP6V0C
AMDHD2
PTP4A1
PCBP3
MIOX
ADM2
ZNF219
TMEM253
PACSIN3
PPIA
PRKDC
MCM4
STX6
GPBP1
GLS
FCGR1A
DDX43
KLF10
ANAPC7
NSUN3
DHFR2
MTRNR2L8
TRIM59
ATOH8
COX19
CSRNP1
TRMT112
TMEM129
TACC3
SLBP
PRDX5
USP9X
SPATA3
HNRNPA1
CBX5
TARDBP
HIRIP3
SLC35F6
UBQLN1
SCAF1
RRAS
PPP2R5C
CHKA
PABPC1
ATIC
FCGR3A
AEN
RBM3
PSME3
BECN1
TEDC1
NEMP1
CRIP1
HNRNPC
NAMPT
MTDH
FBXW4
TUBGCP5
TRA2A
FBXL18
MED26
RTN4RL1
DPH1
SLC25A10
MRPL12
RLF
JUNB
FBXO33
OSGIN2
DNAJB1
ERGIC2
SLC25A17
PPP1R15B
ADGRE5
TMEM88
NAA38
DDX23
CYB5D1
TSTD2
NCBP1
RIPK2
PCNT
C21orf58
CACYBP
THRA
IREB2
LY6L
DNAJA3
CORO7-PAM16
CORO7
SARAF
MFSD11
DEF6
PHB2
PCIF1
SNX16
PLXDC1
ARL4A
TFAP4
TMED10
MYL6B
MYL6
LRCH4
FBXO24
CCDC86
CYTH2
GCLC
GATAD2A
WDR6
ZNF217
DCBLD1
PGP
E4F1
BRICD5
PPP1R15A
PLEKHA4
POLR2J3
ZNF384
FLNA
EMD
SHISA5
LTV1
FCMR
SMG9
RNF31