ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX235054 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◣ SRX235054: U2OS

◢ CLOCK: STRING

AGAP11
ADIRF
PLD6
GET4
MAMDC2
NR1D1
NKIRAS1
NR1D2
SNAPC1
RPEL1
MAN2B2
RALGDS
AP5S1
SYNJ2BP-COX16
SYNJ2BP
COL6A2
GALR1
NTN5
COLEC11
PLEC
PARP10
GRINA
DBP
CA11
COL23A1
G3BP1
CD22
PER2
MTHFD1L
PPL
SPATA3
OSGIN1
BSX
CAMKK1
LFNG
BTNL9
TYMSOS
TYMS
DUX4
PCBP3
PTPRN2
HACL1
BTD
TSPAN31
MARCHF9
CDK4
CRY2
MMP8
THRA
LRRC24
C8orf82
EIF5A2
OTUD3
FSCN2
CBFA2T3
CABLES2
IL4R
CYP2W1
VAMP2
PER1
ANKRD12
LY6L
PIP4P2
YPEL5
FOLR1
ARHGAP39
FNIP1
GNA12
CACNA1I
AVPI1
TSPAN4
POLR2L
PLXDC1
CLN6
TFDP1
PROZ
CPEB1
TUBB2B
FOXJ2
SLC25A13
VPS26A
EPN1
CCDC200
ATXN2
RORC
C2CD4D
TTYH1
ZNF750
LINGO1
AJAP1
RNMT
FAM210A
SLC35A5
ATG3
MUC3A
MRPL40
HIRA
HERC3
LAMP1
SCUBE1
OPRL1
ISOC2
STARD8
MCF2L
ART1
THEG
UBL4B
CASC3
CRYAA
CRYAA2
TEF
FOXL1
SLC22A11
PHACTR3
PUM2
FAH
SNAP29
PI4KA
NDUFAF8
RNASEH2C
KAT5
MDGA2
HIF1A
JPH3
ZNRF2
LRFN4
GGA2
AFAP1
GNAS
DNAJA3
CORO7-PAM16
CORO7
C7orf50
ATP12A
NPTN
LMF1
AGRN
FCMR
SERPINA5
PKP3
COPS7A
RASD2
PKD1L1
H3Y2
PINX1
LRRC3
PDXK
CAMK2B
HNF4A
TMEM116
ERP29
SEPTIN9
MRPS14
KRTAP5-7
PWWP2B
ZNF623
CACNA2D4
CEP112
CSNK1D
PIRT
SPATC1L
OGDH
MXI1
PSMG3
UTS2R
TRIB1
THNSL1
TBC1D3L
TBC1D3K
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
CRY1
TRIM8
ADARB1
RRP1
HPS5
GTF2H1
TBCEL-TECTA
TBCEL
KHDRBS1
TMEM132C
SLC12A7
IQCE
RASAL1
CYTH3
RAB37
LY6E
SLC35F6
SUN3
C7orf57
FRG2
LGR6
BOK
GYG1
ADPRHL1
ZFP36
PLEKHG2
PDP2
PLA2G6
CLUAP1
C16orf90
ARL4A
PGAP6
MRPL28
SPG21
TMEM185B
GGT5
TRAPPC2L
GALNS
SPAAR
HRCT1
SPATC1
SLC45A1
MN1
AMZ1
PNP
PIP4P1
OSGEP
APEX1
MUC20
MAPK11
ZNF778
ILVBL
SLC22A31
PPP6R1
PHF20
OTOS
DGKG
FRG2C
MARCHF8
NDUFS6
MRPL36
NOC4L
DDX51
RGS19
LKAAEAR1
BHLHE40
DIXDC1
HAGHL
CCDC78
ANTKMT
KDM6B
RASA3
KCNK3
SURF4
PALD1
GCNT2
LOC112694756
TLCD3B
UPF3A
ZBTB37
LARP1
SPHK2
ZNF706
UBAC1
NECAB2
KRTAP2-2
KRTAP2-1
KRTAP1-1
CDC16
KCNJ15
FOSL1
FIBP
CCDC85B
PMS2
AIMP2
SLC16A3
RUVBL1
EEFSEC
SIGLEC12
SHISA7
FLT4
CCN4
COMMD8
ADGRA1
POLG2
DDX5
CEP95
ASPHD2
TRAF3IP3
ZFP2
KRTAP4-8
KRTAP4-12
KRTAP4-11
GBE1
ADGRB1
ILF3
FLCN
SYNGAP1
PHF1
CUTA
HDAC4
BCAR1
AATF
SOX12
NDUFB10
RPL3L
RGS11
MSRB1
YDJC
CCDC116
ZNF831
TRAPPC6A
BLOC1S3
ZNF331
PIM3
SERINC4
SERF2
HYPK
CSRNP1
TLX2
PCGF1
LBX2
OSBPL5
MC3R
C1orf159
SDK1
LRTM2
NAPA
PRR29
KRTAP4-4
KRTAP4-3
INSM1
GPD1
COX14
MYEOV
LRRC37B
CLCN7
CEP295NL
KLHL38
C4orf19
AGO1
TNFRSF6B
RFNG
OPCML
GPS1
DCXR
ATP11A
PLET1
COL13A1
RASGRF1
RRAGC
L3HYPDH
JKAMP
CNDP2
TM4SF20
SHKBP1
CHKA
SDHA
CCDC127
KISS1
MTHFR
CLCN6
MAP2K7
TPSB2
TPSAB1
TMEM132D
TKTL1
TEX28
SMOC2
USP7
UBE4A
SERPINB9
YTHDF1
TBX1
RP1L1
MAPK1
ASPSCR1
ARHGEF10
USP36
LOC100130520
CD300H
WTAP
SOD2
RAD50
KRTAP9-9
KRTAP9-8
KRTAP9-3
VENTX
SUN2
SCN5A
PDE1B
UCKL1
CIPC
TMEM74B
NPM1
RAB40B
SPPL2B
LSM7
GLI2
ITGB2
PPAT
PAICS
BHLHE41
ADGRG1
SLC22A7
SKIDA1
UBE2QL1
TMEM132B
PIGQ
NHLRC4
IRAG1
BPI
CPNE7
RPS21
PDE9A
OTOF
OR2M2
SCAF11
CD55
SIRT1
TULP2
TRPM2
TAS1R2
SOWAHA
SLC7A5
NUCB1
EFCAB3
UBE2Q1
CHRNB2
GAS8
LDB1
UPK3A
CEP72
LDHA
KRTAP9-7
KRTAP9-4
IER3
FLOT1
ACY3
DEPTOR
FGF3
TXNIP
AIG1
EIF4A3
TMEM242
ST3GAL1
SOHLH1
N6AMT1
LOC100996750
KRTAP4-7
KCNS3
CNN2
ABCA7
SBK2
KRTAP2-4
KRTAP2-3
FN3K
CASQ1
ADK
MAT2A
SNX8
LDHB
FGFBP1
DACT3
SARAF
DOK7
ACAD9
SLC25A38
MTNR1A
LEPROTL1
HPCAL1
CGREF1
ABHD1
ARHGAP45
SLC38A10
S100A8
RTN4R
LRRC14B
KRTAP9-2
CD7
ACSM2B
MEF2D
RASGEF1C
ANKRD18A
FBXL22
HK2
TPO
PDE4D
MAEA
LY6H
KCNK9
RIMBP2
GOLIM4
SQLE
CDT1
KIAA1522
DRD4
PCDHA13
PCDHA12
PCDHA11
LCN1
CRTAM
ACTRT2
TMEM255B
NPEPL1
NLK
ZFP91
LPXN
RAMP3
SHC2
RGPD6
KRTAP10-7
KRTAP10-6
SPRING1
RNFT2
TMEM204
PPP6R2
PAPLN
MARS2
WDR37
IDI1
ZDHHC11
KRT17
FAM240C
CDHR1
ARRDC4
TP53I11
OCA2
GRB10
GALNT16
FOXI2
USP32
TLCD5
ARHGEF12
ACSS1
GGTLC3
MTRNR2L8
ZNF74
KRTAP4-9
FRMD1
CERS3
TCERG1
RELL1
ZNF16
SOX8
PNMA6E
NKAIN4
ISYNA1
PTDSS2
PANX2
KRTAP10-5
KRTAP10-4
HAGH
FAHD1
TOP1MT
POTEH
HBZ
HBM
GRM8
GTF3A
SPEG
ALDH3B2
TMEM248
ZNF213
MS4A15
GEMIN4
TMSB10
MGAT3
KRTAP9-6
CTSH
ERCC1
SLC7A10
PVALB
MIOS
INO80
NUP188
DOLK
ASB6
HELZ2
FNDC11
TDRD15
SLC35F4
SELP
HGC6.3
SLC5A6
CAD
ATRAID
RAB40C
SLC5A9
GOLGA6L10
ZCCHC7
TPD52
SDC3
MBP
GNAI2
AJUBA
HOXA3
HOXA6
HOXA5
HOXA7
TEPSIN
MB
LORICRIN
CEP131
C3orf70
BCL2L14
TPSD1
SGTA
LPA
PDE4A
MARVELD1
TUBB3
MC1R
RTP5
PDCD1
PCDHB3
PCDHB2
ISLR
SLC9A3
FOXL3
ERRFI1
CD5
FAM104A
C17orf80
ZNF536
TMEM119
EDN2
ANKLE2
FXYD3
C1QTNF1
TMEM175
GAK
KPTN
SEMA4D
NOS1
NLRP9
MPP2
KLHL31
BAIAP3
ADGRE1
NACC2
SEPTIN5
GP1BB
NOL8
CENPP
PCDHB12
PCDHB11
PCDHB10
MRAP
GJB3
CCR6
PDE4DIP
PKN1
GAS6
PHRF1
SLC27A5
SLC16A1
RELT
KRTAP10-3
KRTAP10-2
SPACA3
ELFN1
C19orf48
SHTN1
LPAR6
GDF2
B3GNTL1
AGR2
BBC3
CFAP20
WNT7B
KRTAP9-1
KRTAP4-2
KRTAP4-1
B3GAT1
LRRC56
HRAS
ZSCAN22
MYBPC3
MRGPRF
KRTAP10-1
C3
ZCCHC14
MMP25
PRLH
SLC19A1
ADAP1
RUBCN
NEU4
FYTTD1
ASPH
IPMK
CISD1
CACNA1B
TRAF7
CERK
MUC5AC
C17orf97
SELENOW
MPP3
CD300LG
SUMO3
UBE2G2
ANGPT2
UCN3
CD300A
NEMP1
NAB2
ZNF566
AATK
CALN1
IL32
TECPR1
SHANK1
CLEC11A
LSP1
SLC9A3R2
CIART
C1orf54
LOC102724770
DGCR6
OLFML2A
NR6A1
GSN
SNRPE
IGFBP4
RIPOR3
RAD9A
PPP1CA
MTRNR2L1
ARL4D
PFDN4
PER3
PTBP1
SLCO4A1
BCAS3
MAPK6
PLEKHF2
RNF43
DOCK6
IGSF8
PMEPA1
HOXC13
TRIM37
CSDE1
LNX1
FAM76A
PIK3IP1
HOOK2
EPB41
ERCC6L2
ELAVL3
TRPV4
LAG3
ZNF292
STX4
RBM39
UVRAG
ZNF718
SLC20A1
DHX35
LRCOL1
ARFGEF2
ZNF595
VPS11
UBE2B
CDKL3
EMC2
RNASEK
C17orf49
P2RX2
AP5Z1
DAZAP2
MAP1LC3B
FBXO31
CDK12
PLEKHG5
DDX42
CCDC47
SMIM6
SMIM5
PTEN
KLLN
PPP1R3C
MAPKAPK3
CISH
S100A13
S100A1
CHTOP
SETD1B
RHOF
TRAPPC10
WASHC2A
NPR3
HES4
APPBP2
SNRPA
C19orf54
DENR
TMEM265
PHKG2
LRATD2
INAFM1
KMT2E
MICALL2
PPM1D
RFESD
VGF
AP1S1
PNPLA7
MRPL41
EIF3B
PC
SLC35B2
HSP90AB1
MED1
FAM117B
WASHC2C
RPUSD4
FAM118B
CEBPB
SLC33A1
MORF4L1
UBAP2L
C1orf43
NAA80
IFRD2
HYAL3
ALG13
TNNI3
DNAAF3
CREBRF
GMFB
CCDC24
NUDCD3
SRP54
UTP18
SPNS1
MBTD1
LAT
CEP63
ANAPC13
NCOA3
WDR62
THAP8
NFKBIE
PRORP
PPP2R3C
TEKT3
PRDX6
BCAM
MAPK1IP1L
NME1
BRIP1
PRKAR1A
TIMM22
ZNF438
DPP3
SDR39U1
SRSF1
USP8
HBP1
LSM12
G6PC3
ZNF263
TBX2
GTF2A1
RCCD1
TRMO
XPOT
RGS20
ATP6V1H
ADNP2
TRIQK
CSTF1
AURKA
HMGB2
TOB1
COQ10B
NFX1
EAPP
GSK3B
SLC25A36
SRSF5
TMEM231
GABARAPL2
CHFR
MAP4K1
EIF3K
PRPF3
THOC7
ATXN7
PSMD5
CLTC
TMEM18
SLC22A5
IP6K1
TUBD1
RPS6KB1
ZMYND8
TPD52L2
ABHD16B
SYCP2
PPP1R3D
KLF1
GCDH
FAM217B
DNASE2
TCF25
FAM214A
RIN1
LYRM9
ABHD11
CCNL1
ARRDC3
ZSWIM1
SPATA25
NEURL2
CTSA
DISP3
BCAS4
SLC25A25
RAB17
RRP36
MEA1
YBX2
ZNF285
GNG14
DHPS
PDE12
PTCD3
POLR1A
CTTN
TRIP6
SRRT
NRAS
EPM2A
TRAPPC9
SRCAP
LOC730183
SENP8
MYO9A
SEPTIN2
NAPRT
MROH6
HDLBP
NXT1
GZF1
CLN3
APOBR
MADD
TLE6
KCNIP2
SUMF1
STAT6
THAP5
DNAJB9
RNF13
PAF1
MED29
ELF3
KDM4C
ZNF687
NBN
SBNO2
ATAD3A
HNRNPF
ZC3H4
CNOT3
SLC2A4RG
LIME1
EIF1
RMI1
HNRNPK
FAM214B
EED
SLC25A26
FZD1
SPTBN4
BLVRB
BCLAF1
SPG7
NAA50
ATP6V1A
TMEM187
HCFC1
MYL12A
RPS11
RPL13A
ZZZ3
POLI
GABARAP
HEXA
TM9SF1
IPO4
TBC1D17
PNKP
AKT1S1
RRAGB
CMC2
CENPN
PRR5L