ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1393087 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◣ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

NKIRAS1
NR1D2
TEF
AGAP11
ADIRF
PER2
PER3
DBP
CA11
AP5S1
VAMP2
PER1
NR1D1
CPEB1
FRG2C
CRY2
BHLHE40
DUX4
LAMP1
MTRNR2L1
COL23A1
NEMF
MTHFD1L
RALGDS
ANKRD12
PPL
FOXJ2
GET4
FRG2
KLF11
OLFML2A
NR6A1
PIK3IP1
NPIPB15
CRY1
CIART
C1orf54
PLD6
RNASEH2C
KAT5
TSPAN31
MARCHF9
CDK4
LOC102724770
DGCR6
MAMDC2
CLUAP1
C16orf90
TRAPPC6A
BLOC1S3
NPTN
RORC
C2CD4D
CD22
PNP
PIP4P1
OSGEP
APEX1
GSN
SNRPE
BCAR1
IGFBP4
NOL8
CENPP
EIF5A2
RIPOR3
ART1
RAD9A
PPP1CA
OSGIN1
ARL4D
SLC35A5
ATG3
PFDN4
YPEL5
LRRC56
HRAS
TMEM116
ERP29
COMMD8
CEP112
PTBP1
SLCO4A1
KHDRBS1
BCAS3
MAPK6
PLEKHF2
RNF43
CLN6
DOCK6
IGSF8
HPS5
GTF2H1
PMEPA1
CLCN7
HOXC13
TXNIP
CCDC200
TRIM37
CSDE1
LNX1
FAM76A
HOOK2
GTF3A
EPB41
POLG2
DDX5
CEP95
ERCC6L2
PHRF1
ELAVL3
SHKBP1
TRPV4
LAG3
SPATC1
MTHFR
CLCN6
ZNF292
STX4
RBM39
AVPI1
UVRAG
ZNF718
SLC20A1
DHX35
LRCOL1
ARFGEF2
ARRDC4
USP32
ZNF595
VPS11
UBE2B
CDKL3
EMC2
VPS26A
RNASEK
C17orf49
MAP2K7
HIF1A
P2RX2
AP5Z1
DAZAP2
SPG21
ISOC2
MAP1LC3B
FBXO31
CDK12
ILF3
FOSL1
FIBP
CCDC85B
PLEKHG5
DDX42
CCDC47
SMIM6
SMIM5
RPEL1
FNIP1
PTEN
KLLN
PPP1R3C
MUC3A
MAPKAPK3
CISH
S100A13
S100A1
CHTOP
SETD1B
RHOF
TRAPPC10
WASHC2A
NPR3
HES4
APPBP2
SNRPA
C19orf54
DENR
TMEM265
PHKG2
LRATD2
SLC25A13
INAFM1
SERINC4
SERF2
HYPK
KMT2E
CAMKK1
MICALL2
PPM1D
TRAPPC2L
GALNS
RFESD
VGF
AP1S1
PNPLA7
MRPL41
G3BP1
EIF3B
PMS2
MRPL40
HIRA
AIMP2
PC
SLC35B2
HSP90AB1
MED1
FAM117B
WASHC2C
ZNRF2
RPUSD4
FAM118B
CEBPB
SLC33A1
ZNF331
MORF4L1
UBAP2L
C1orf43
NAA80
IFRD2
HYAL3
ALG13
TNNI3
DNAAF3
CREBRF
GMFB
CCDC24
NUDCD3
SPHK2
SRP54
PRLH
UTP18
SPNS1
MBTD1
LAT
CEP63
ANAPC13
NCOA3
WDR62
THAP8
NFKBIE
PRORP
PPP2R3C
TEKT3
PRDX6
BCAM
MAPK1IP1L
NME1
BRIP1
TMEM185B
B3GNTL1
PRKAR1A
TIMM22
ZNF438
PIM3
DPP3
PLEC
SDR39U1
SRSF1
USP8
HBP1
LSM12
G6PC3
ZNF263
TBX2
GTF2A1
RCCD1
KDM6B
TRMO
XPOT
RGS20
ATP6V1H
SNAPC1
ADNP2
RRAGC
TRIQK
CSTF1
AURKA
HMGB2
TOB1
COQ10B
NFX1
FLCN
EAPP
HERC3
GSK3B
SLC25A36
TTYH1
GYG1
LRFN4
SRSF5
TMEM231
GABARAPL2
CHFR
MAP4K1
EIF3K
TKTL1
TEX28
ATXN2
PRPF3
THOC7
ATXN7
PSMD5
CLTC
TMEM18
USP36
GBE1
SLC22A5
IP6K1
TUBD1
RPS6KB1
ZMYND8
TPD52L2
ABHD16B
YDJC
CCDC116
SYCP2
PPP1R3D
KLF1
GCDH
FAM217B
DNASE2
TCF25
FAM214A
RIN1
LYRM9
UBE2Q1
CHRNB2
ABHD11
CCNL1
AFAP1
ARRDC3
ZSWIM1
SPATA25
NEURL2
CTSA
SYNGAP1
PHF1
DACT3
CUTA
DISP3
BCAS4
SLC25A25
RAB17
ZBTB37
RRP36
MEA1
ZNF706
YBX2
ZNF285
GNG14
DHPS
PDE12
PTCD3
POLR1A
PUM2
CTTN
TRIP6
SRRT
COL6A2
NRAS
GPD1
EPM2A
COX14
TRAPPC9
SNAP29
PI4KA
SRCAP
LOC730183
SENP8
MYO9A
SEPTIN2
NAPRT
MROH6
HDLBP
NXT1
GZF1
CLN3
APOBR
MADD
SCAF11
TLE6
KCNIP2
SUMF1
STAT6
THAP5
DNAJB9
RNF13
CYP2W1
PAF1
MED29
ELF3
KDM4C
GGA2
MARCHF8
UCKL1
ZNF687
NBN
SBNO2
ATAD3A
NTN5
HNRNPF
ZC3H4
CNOT3
SLC2A4RG
LIME1
EIF1
RMI1
HNRNPK
FAM214B
EED
SLC25A26
FZD1
SPTBN4
BLVRB
BCLAF1
SPG7
NAA50
ATP6V1A
TMEM187
HCFC1
MYL12A
TRIB1
THNSL1
RPS11
RPL13A
ZZZ3
POLI
GABARAP
PPAT
PAICS
HEXA
CD55
TM9SF1
IPO4
TBC1D17
PNKP
AKT1S1
RRAGB
CMC2
CENPN
PRR5L
COMMD9
PPFIA4
HSF2
ZFP36
PLEKHG2
SPAAR
HRCT1
COL6A1
PPP1R35
TBCEL-TECTA
TBCEL
RMND1
MVB12A
ARMT1
SLC25A39
PSMD6
H4C9
H2BC12
H2AC12
OPRL1
RTEL1
NTMT1
C9orf50
NFYC
ARIH1
UCP2
WDR74
STX5
TCERG1
EIF4B
CHMP2B
EPB41L4B
PDXK
CFAP251
MAN2B2
SULF2
LPCAT1
MED13
EFR3B
ZCWPW1
MRPS23
MEPCE
CD164
DPH2
B4GALT2
ATP6V0B
UNC13D
SLC35C2
SETD1A
ORAI3
LFNG
FNBP4
RFX3
UNK
H3-3B
PARD6B
NOP14
GRK4
SNX5
MGME1
DBNL
MTCH2
GALR1
DHX40
SLC3A2
TMEM141
RIMBP2
CCDC183
BTNL9
H4C14
H3C15
H3C14
C6orf62
WTAP
SOD2
BRPF1
LAMC1
CDIPT
ERCC1
NAIF1
DGAT2
TENT5B
TUFT1
POLD1
NR1H2
ZNF335
TRIM8
CASC3
YEATS4
HNRNPA2B1
CBX3
TIPARP
SRP9
ISG20
EXOSC5
BCKDHA
SMIM41
ATG101
MCM7
AP4M1
FOXO6
ZNF778
TCP11L2
LARP1
BAX
TACR2
RGS19
LKAAEAR1
TSSK4
SCAMP4
ADAT3
LCN12
FBXW5
C8G
CIPC
RNF223
PKD1L3
DHODH
HNRNPH2
GLA
TM4SF1
RPSA
FAM178B
PRKCI
TMEM52
SULT1A4
SULT1A3
INO80
CALML6
GABPB2
HDAC4
EIF4A1
CD68
TSEN34
MBOAT7
MEFV
COLEC11
CAP1
SIT1
CLN8
CCDC107
ARHGEF39
SPPL3
PPP4R3B
CNNM2
VPS33A
ESYT3
POLR1D
LNX2
ILVBL
MAPK15
ITGB1
RBBP5
ZFP91
LPXN
SYNJ2BP-COX16
SYNJ2BP
MAF1
CYC1
SLC49A4
HSPBAP1
PDXDC1
MAL2
KAT7
CLK1
SRA1
SLC35A4
APBB3
CTDSP2
ADK
TMEM53
SLX1B
SLX1A
BOLA2B
BOLA2
ARMH1
PNO1
ENSA
CENPA
USP48
GFRA3
DDX3X
ZFYVE28
CFAP99
TUBA1C
YARS1
S100PBP
ZHX2
MOCS3
MAX
DPM1
BCL9L
SREK1
STXBP4
PHF23
DVL2
COX11
RNF139
KLHL12
SYNCRIP
MMADHC
RAD50
MZF1
ZBTB7B
LENEP
EMP3
CCDC114
NAPA
H2AC19
H2AC18
TMC4
LGI1
SLC43A2
ZFP1
PCBP1
RBBP6
WDR89
TADA3
ARPC4-TTLL3
ARPC4
ADGRB1
DDX59
PTPRN2
SKA2
PRR11
YWHAZ
XRN2
VMP1
TBC1D13
PTRH2
AGAP2
IGSF21
GNAS
SLC25A24
PPM1A
SLC39A6
ELP2
THRAP3
L3HYPDH
JKAMP
EIF4G1
SEPTIN9
EIF4A2
CALM2
DLX4
CYB561
CD2BP2
SLC25A11
RNF167
PFN1
TMCC1
MAP11
LAMTOR4
FBXO46
EIF5
GP1BA
RPS29
HEXIM2
TUBA1B
RNMT
PLA2G1B
FAM210A
PRC1
ECH1
PPP1R13L
POLR1G
STAM2
FBXO5
SPATA2
H4C15
PEX14
DFFA
TJP2
PDP2
NDUFS6
MRPL36
STMN1
LUC7L2
KPNA2
HES1
MLH1
EPM2AIP1
SGO1
COPS7A
SMARCD2
TBC1D15
BOLA2-SMG1P6
UBR5
CDK19
BCL6
AMD1
STOML2
PIGO
ASPH
SON
GART
ARID3A
PDCD6IP
SPAG9
ATP6V0C
AMDHD2
PTP4A1
PCBP3
MIOX
ADM2
ZNF219
TMEM253
BCAS1
PACSIN3
PPIA
PRKDC
MCM4
STX6
EIF3E
GPBP1
GLS
FCGR1A
DDX43
NPM1
KLF10
ANAPC7
GREB1
NSUN3
DHFR2
MTRNR2L8
TRIM59
MTERF4
ATOH8
COX19
SLC25A19
FAM53C
CSRNP1
CDC25C
TRMT112
TMEM129
TACC3
SLBP
PRDX5
USP9X
SPATA3
HNRNPA1
CBX5
TARDBP
TATDN2
HIRIP3
SLC35F6
UBQLN1
SCAF1
RRAS
PPP2R5C
CHKA
RNFT1
PABPC1
ATIC
FCGR3A
AEN
RBM3
PSME3
BECN1
TEDC1
NEMP1
CRIP1
HNRNPC
NAMPT
MTDH
FBXW4
TUBGCP5
TRA2A
FBXL18
MED26
RTN4RL1
DPH1
SLC25A10
MRPL12
RLF
PAK1IP1
JUNB
C6orf52
ZFP62
ATF7-NPFF
ATF7
FBXO33
OSGIN2
DNAJB1
ERGIC2
SLC25A17
PPP1R15B
ALDOA
ADGRE5
TMEM88
NAA38
DDX23
CYB5D1
KDM2A
GPRC5A
TSTD2
NCBP1
UQCRC2
RIPK2
PCNT
C21orf58
CACYBP
THRA
IREB2
LY6L
DNAJA3
CORO7-PAM16
CORO7
SARAF
MFSD11
STX16
DEF6
PHB2
PCIF1
MCCC1
SNX16
PLXDC1
ARL4A
TFAP4
TMED10
MYL6B
MYL6
LRCH4
FBXO24
CCDC86
CYTH2
GCLC
GATAD2A
WDR6
ZNF217
PES1
DCBLD1
NOTCH2NLC
PGP
E4F1
BRICD5
PPP1R15A
PLEKHA4
POLR2J3
ZNF384
FLNA
EMD
SHISA5
LTV1
FCMR
PDE4DIP
SMG9
RNF31
PSME2
EMC9
CRIP2
HS3ST3B1
PARP10
GRINA
HACL1
FAF1
CDKN2C
BTD
TRAF3IP3
FAF2
SPTSSB
DUSP1
TSEN54
LLGL2
CASKIN2
ARF6
SERINC3
PMVK
PKIG
PHF12
GOLIM4
SLC12A4
PRSS33
ELOB
BANP
OGFOD2
ARL6IP4
ABCB9
UBALD1
U2AF2
MGRN1
CCDC106
MBNL1
TFAP2C
SLC35B1
TOP3A
SMCR8
TANC2
SETDB1
KIFC1
RCE1
MUC20
SLC25A41
RAB24
PRELID1
MXD3
KHSRP
TRA2B
CHMP3
STK35
TIMM44
HSPH1
PSMC5
FTSJ3
AHI1
TAGLN2
MLLT11
HNRNPD
PRKAG2
GMNN
TIPIN
TEX14
RAD51C
YIF1A
TMEM151A
SLC5A6
CAD
ATRAID
PIK3R3
CCDC6
ZNF24
TREX1
LAMTOR1
KIAA0895
APH1A
ANLN
ANAPC15
METTL1
EEF1AKMT3
CYP27B1
METTL23
JMJD6
DNAJB5
TDRD1
DNAJB12
CCDC186
SYT1
SRSF4
PIGW
OSBPL1A
MYO19
GGNBP2
SOCS5
RITA1
KRT8
KPNA3
DDX54
ZNHIT1
USP17L22
USP17L21
USP17L20
USP17L12
PLOD3
SPATA17
RRP9
PARP3
PARP16
GPATCH2
NOP58