ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457524 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◣ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

GET4
TSPAN31
MARCHF9
CDK4
AP5S1
RNASEH2C
KAT5
CRY2
VAMP2
PER1
CIART
C1orf54
AGAP11
ADIRF
PER2
DBP
CA11
CRY1
PLD6
CLUAP1
C16orf90
RORC
C2CD4D
GSN
CD22
NPTN
IGFBP4
BCAR1
PNP
PIP4P1
OSGEP
APEX1
CEP112
RAD9A
PPP1CA
SNRPE
BHLHE40
LOC102724770
DGCR6
FRG2C
SLC35A5
ATG3
MAMDC2
TRAPPC6A
BLOC1S3
RALGDS
HOXC13
DUX4
COMMD8
TEF
SLCO4A1
OLFML2A
NR6A1
NKIRAS1
NR1D2
LAMP1
KHDRBS1
TMEM116
ERP29
MAPK6
DOCK6
RIPOR3
RNF43
ZNF292
PFDN4
LRRC56
HRAS
NOL8
CENPP
TRPV4
PTBP1
HPS5
GTF2H1
VPS11
YPEL5
LAG3
ANKRD12
DHX35
IGSF8
EIF5A2
NR1D1
HOOK2
PLEKHF2
EPB41
UVRAG
ARL4D
SPG21
EMC2
LNX1
TRIM37
CLCN7
UBE2B
CDKL3
CLN6
TRAPPC10
AP5Z1
WASHC2A
ARFGEF2
ART1
STX4
FOXJ2
FRG2
PIK3IP1
MAP2K7
ELAVL3
LRCOL1
P2RX2
BCAS3
MTHFR
CLCN6
PMEPA1
TXNIP
RPUSD4
FAM118B
MAPKAPK3
CISH
CSDE1
FAM76A
SMIM6
SMIM5
RNASEK
C17orf49
VGF
AP1S1
SPATC1
OSGIN1
WASHC2C
CNOT3
SETD1B
RHOF
TRMO
HES4
APPBP2
SNRPA
C19orf54
SHKBP1
AFAP1
HIF1A
VPS26A
MAP4K1
EIF3K
GMFB
SLC20A1
B3GNTL1
PRR5L
COMMD9
NPR3
MTRNR2L1
SBNO2
SPNS1
LAT
CHFR
USP8
PLEKHG5
ARRDC4
NAPRT
MROH6
RAB17
USP32
ISOC2
WDR62
THAP8
IP6K1
PNPLA7
MRPL41
ZNF331
CCDC200
LCN12
FBXW5
C8G
NME1
RRP36
MEA1
RFESD
SLC35B2
HSP90AB1
NFKBIE
PRDX6
AVPI1
DAZAP2
LRATD2
MAPK1IP1L
RRAGB
ALG13
ZSWIM1
SPATA25
NEURL2
CTSA
BCAM
PRKAR1A
CREBRF
RGS20
ATP6V1H
UBAP2L
C1orf43
HBP1
SUMF1
MUC3A
UTP18
MBTD1
TNNI3
DNAAF3
EPB41L4B
TRAPPC2L
GALNS
SLC33A1
CAMKK1
PTEN
KLLN
FAM117B
THAP5
DNAJB9
KCNIP2
SPTBN4
BLVRB
GTF3A
LSM12
G6PC3
ZNF285
YDJC
CCDC116
MAP1LC3B
FBXO31
RMND1
ARMT1
ZNF438
KLF1
GCDH
DNASE2
PMS2
AIMP2
YBX2
HEXA
UBE2Q1
CHRNB2
FAM178B
RPEL1
RIN1
CTTN
ELF3
ABHD11
FOSL1
FIBP
CCDC85B
STAT6
TEKT3
LAMC1
PIM3
CLTC
SNX16
KDM6B
CEBPB
RIMBP2
LYRM9
TRAPPC9
NAA80
IFRD2
HYAL3
TCF25
ZC3H4
ZNRF2
SLC25A13
LGI1
CCDC24
TIMM22
HERC3
H4C9
H2BC12
H2AC12
DPH2
B4GALT2
ATP6V0B
IGSF21
CLN3
APOBR
ILF3
PPP1R3C
PRLH
STMN1
FAM214A
FAM214B
ZNF706
NXT1
GZF1
SPAAR
HRCT1
PKD1L3
DHODH
TMEM231
GABARAPL2
PPL
ZBTB37
MAX
GTF2A1
LRFN4
TBX2
GYG1
PPFIA4
HNRNPH2
GLA
OPRL1
RGS19
LKAAEAR1
MAPK15
POLG2
DDX5
CEP95
ADNP2
FNIP1
KLHL12
EAPP
JUNB
SLC25A39
KMT2E
SLC25A26
SCAF11
PER3
DPP3
USP17L22
USP17L21
USP17L20
USP17L12
YIF1A
TMEM151A
SERINC4
SERF2
HYPK
LCP2
PPM1D
CEP63
ANAPC13
SLC22A5
G3BP1
TBCEL-TECTA
TBCEL
ATXN2
POLI
SGO1
NUDCD3
PSMD6
OR2B11
NBN
PPAT
PAICS
DDX3X
BTNL9
XRN2
PDE12
ATAD3A
UCKL1
GSK3B
TANC2
TACR2
CSTF1
AURKA
RPSA
CLN8
VPS33A
EPM2A
TMEM265
PHKG2
PC
NCOA3
BAX
IQSEC1
MORF4L1
FOXO6
NTMT1
C9orf50
SMARCD2
PAF1
MED29
SNX5
MGME1
RPL27
IFI35
S100A13
S100A1
CHTOP
DGAT2
SLC2A4RG
LIME1
COL6A2
TRIQK
RTN4RL1
DPH1
TLE6
FCMR
RNF13
PACSIN3
ATIC
UBR5
SYNGAP1
PHF1
CUTA
TENT5B
MICALL2
MVB12A
ATP9B
LPCAT1
PABPC1
PLA2G1B
CHMP2B
EXOSC5
BCKDHA
COQ10B
CFAP251
YWHAZ
EFR3B
LARP1
RCCD1
SEPTIN2
HDLBP
TBC1D13
TRIB1
ZZZ3
TBC1D17
PNKP
AKT1S1
SPHK2
CNNM2
ERCC6L2
GNG14
DHPS
SDR39U1
TCP11L2
ZHX2
ESYT3
TDRD1
CCDC186
VILL
SLC43A2
ADGRB1
FLCN
RTEL1
DDX42
CCDC47
RNF223
TMEM52
CALML6
GFRA3
MIOX
ADM2
ARMCX5-GPRASP2
GPRASP2
BHLHB9
SENP8
MYO9A
PLEC
MADD
SIT1
CCDC107
ARHGEF39
SPG7
PCBP1
GPD1
COX14
MYL12A
MTHFD1L
TMEM129
TACC3
SLBP
MCCC1
PKNOX1
SCAMP4
ADAT3
DDX59
GOLIM4
RRAGC
DISP3
ISG20
ZNF263
BCL9L
ADGRG7
SLC25A36
SPPL3
SLC25A24
STXBP4
COX11
ZNF286A
DACT3
PRPF3
HSF2
HNRNPA1
CBX5
DEF6
COL23A1
CNPY2
GALNT18
USP17L11
USP17L18
USP17L17
USP17L15
TOB1
ELAPOR1
SRP54
ADGRE5
SETD1A
ORAI3
SLC39A6
ELP2
NDUFS6
MRPL36
ATP6V0C
AMDHD2
AGPAT2
C14orf93
NAT10
ZNF672
BRIP1
TBC1D15
CA4
GBE1
MLH1
EPM2AIP1
GPRASP1
TRIM8
SLC25A10
MRPL12
CLK1
HES1
METTL1
EEF1AKMT3
CYP27B1
RAB21
USP36
EIF4A1
CD68
EIF3E
NPM1
SNAPC1
CD164
PRORP
PPP2R3C
KDM4C
CYB561
AEN
HS3ST3B1
TSEN34
MBOAT7
TMC4
FBXO5
SYCP2
PPP1R3D
FAM217B
NFX1
PARN
BFAR
TMEM242
ILVBL
INO80
GADD45G
LOC112577592
GRIA1
CMC2
CENPN
TIGD5
EEF1D
HNRNPA0
FLNA
EMD
MUC20
ZNF687
CCDC86
C5orf51
RAD23A
CALR
GABARAP
PHF23
DVL2
TBC1D30
GNS
PPP5D1
CALM3
TMEM141
CCDC183
STX6
C15orf39
PRKAG2
NQO1
SOCS5
DENR
SPATA2
PDP2
DNAJB5
SULF2
PARD6B
NAMPT
GCLC
MTCH2
WTAP
SOD2
TIPARP
TMEM53
ARMH1
HES7
ALOXE3
VDAC2
PPM1H
SPAG9
IGFL1
GGA2
STC2
ORC4
MBD5
TUBD1
RPS6KB1
PUM2
L3HYPDH
JKAMP
RAD50
DLX4
ATOH8
ZFP62
SLC49A4
HSPBAP1
SYNCRIP
SRCAP
LOC730183
SLC25A41
KHSRP
MMP8
NUP42
GRAMD2B
EIF1
RNF139
STAM2
MTDH
HNRNPD
TOR3A
YARS1
S100PBP
MEFV
ATP13A3
YEATS4
HDAC4
GPRC5A
CD37
CASTOR1
THOC7
ATXN7
SRA1
SLC35A4
APBB3
ARID3A
OSGIN2
ZBTB40
MRPL27
EME1
UCP2
USP9X
MFSD11
METTL23
JMJD6
TCERG1
MAF1
CYC1
TSTD2
NCBP1
TOP3A
SMCR8
CCDC6
FAM86B1
ZNF696
BCAS4
PTCD3
POLR1A
THRAP3
CASC3
HSPH1
XPOT
ENSA
NEMP1
RLF
DNAJB1
CAMLG
TBCK
AIMP1
MAP11
LAMTOR4
ARF6
NUP188
DOLK
ICAM5
ICAM4
PTPRH
SLC25A19
TATDN2
CCNI
GABPB2
ADK
CENPA
PAK1IP1
C6orf52
UBE2I
NFYC
CSRNP1
OSBPL1A
SUPV3L1
RBBP5
PDCD6IP
NCL
PKN1
C9orf62
EIF3B
C17orf58
SSBP1
NOP14
GRK4
GALR1
CIPC
MZF1
SYNRG
TMEM18
ZFP36
PLEKHG2
WDR89
PEX14
DFFA
AMMECR1L
DCBLD1
BMF
ZNF778
SMIM41
ATG101
DUSP1
SHOX2
NRDC
PIGC
C1orf105
EFNA3
SPTSSB
HOXB8
HOXB7
HOXB6
KPNA2
FAF1
CDKN2C
TAGLN2
HIPK1
RMI1
HNRNPK
TAX1BP3
EMC6
TMCC1
HPSE
MRPL35
IMMT
PDE4A
PHRF1
ZMYND8
MAL2
SLC30A1
STAT1
FOXRED2
INTS6
INAFM1
NRAS
TMEM187
HCFC1
TARDBP
LY6L
TIMM44
CC2D1B
KCNJ18
BCLAF1
RCE1
PSMC5
FTSJ3
SOX12
GPI
TAPBPL
CD27
TM9SF1
IPO4
PMVK
CACHD1
EEF1A2
PRC1
RAB24
PRELID1
MXD3
SDC4
SYS1
ZFPM1
ERCC1
ZNF219
TMEM253
SRSF5
TBL1X
ATP5MC1
ACVR2B
SETD6
PPP2R2C
UNC13D
ASPH
ASB2
WBP2
PPP1R35
ZCWPW1
MEPCE
TM4SF1
FAM53C
CDC25C
FBXL18
BAHCC1
ASF1B
MARVELD1
CCNL1
BANP
ZBTB10
TNPO2
ATL2
TMEM185B
DHX40
STK35
SLC12A6
NUTM1
NOP10
ABHD6
WDR74
STX5
EIF4G1
PSME3
BECN1
ZNF408
ARHGAP1
ACAP2
SLC6A18
VMP1
PTRH2
LUC7L2
ZNF384
RSL1D1
ATP6V1G1
SFSWAP
SLC35C2
ITGB1
CSNK1D
PDIA4
TAF9
RAD17
AK6
CCT2
TM2D3
SLC25A25
NAIF1
KCND3
NAPA
APC
TRIP6
SRRT
NPIPB15
SLC3A2
ZNF335
TJP2
SLC12A4
TIPIN
HSPA9
ABAT
PITRM1
ARL4A
MYL6B
MYL6
SIRT4
CANX
HNRNPF
THNSL1
CAP1
TMEM88
NAA38
CYB5D1
ZNF57
SH3BP2
ERLIN2
SREK1
LAMTOR1
ANAPC15
AIG1
EBAG9
SLAMF9
IGSF9
PLAAT3
PDE6A
RFX3
FBXO33
MBNL1
NDUFB3
FAM126B
GATAD2A
TSPYL1
DSE
AP1G1
KLF4
PDE9A
PTP4A1
COPS7A
PHACTR3
LUC7L
FAM234A
LPIN3
EIF5
DNAJB12
ADAMTS17
PCBP3
RRP9
PARP3
NADK
SLC35B1
UAP1L1
SMG8
RCHY1
PDK2
MAN1B1
TMEM14C
POLR1D
LNX2
GLS
RNPEPL1
DUSP28
ANKMY1
PTPN1
RBM22
GPRC5B
BRPF1
CD2BP2
ALDOA
LTV1
PPP4C
PSMD14
MARCHF8
PIK3R3
CEP152
CDK5RAP3
EBPL
CNIH3
PRKCI
RITA1
DDX54
DYNC2I2
TFF1
NDRG1
PES1
SCN5A
TBCB
POLR2I
OVOL3
CIRBP
FAM174C
EFNA2
SRSF1
SMG9
MFSD4B
NOP58
C3orf14
LRP10
UBFD1
EARS2
LSR
MRPL45
MAGI1
MSTO1
RNFT1
POLR2J3
ANKHD1-EIF4EBP3
ANKHD1
PNO1
DOK7
PFAS
CTC1
LGR6
MRM3
GLOD4
TEDC1
CRIP1
MED26
CRIP2
RHOD
PSMD9
HPD
ELK4
ARRDC3
RELL1
AKAP10
TAF6
MBLAC1
CNPY4
FNBP4
DBNL
TUFT1
TEX14
RAD51C
TMED10
SLC5A6
CAD
ATRAID
CD302
GABPB1
CMTR2
EPPK1