ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457295 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◣ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

TSPAN31
MARCHF9
CDK4
GET4
PLD6
RNASEH2C
KAT5
CRY2
AP5S1
AGAP11
ADIRF
PER2
CRY1
CLUAP1
C16orf90
VAMP2
PER1
NKIRAS1
NR1D2
CIART
C1orf54
GSN
DBP
CA11
RALGDS
CD22
PNP
PIP4P1
OSGEP
APEX1
IGFBP4
NPTN
BCAR1
RORC
C2CD4D
LAMP1
RAD9A
PPP1CA
TRAPPC6A
BLOC1S3
CLCN7
SLC35A5
ATG3
COMMD8
ANKRD12
CDK12
MED1
CEP112
HOXC13
PHRF1
LRRC56
HRAS
BHLHE40
SNRPE
TMEM116
ERP29
KHDRBS1
OLFML2A
NR6A1
DENR
RIPOR3
TEF
MAPK6
RBM39
GTF3A
DUX4
PTBP1
DOCK6
DHX35
SLCO4A1
RNF43
ZNF292
YPEL5
VPS11
ELAVL3
NOL8
CENPP
AP5Z1
ARFGEF2
HPS5
GTF2H1
NR1D1
PIK3IP1
LAG3
EIF5A2
MTHFR
CLCN6
PER3
TRPV4
WASHC2A
ART1
EPB41
FRG2C
PLEKHF2
STX4
UVRAG
IGSF8
TRAPPC10
UBE2B
CDKL3
MAMDC2
FAM76A
PSMD5
HOOK2
ERCC6L2
RPUSD4
FAM118B
PMEPA1
EMC2
CLN6
VPS26A
LNX1
RNASEK
C17orf49
SPATC1
SPG21
SMIM6
SMIM5
SLC35B2
HSP90AB1
NFKBIE
SETD1B
RHOF
SHKBP1
MICALL2
FOXJ2
MAP2K7
SLC33A1
TRIM37
TRAPPC2L
GALNS
OSGIN1
AVPI1
VGF
AP1S1
ARL4D
WASHC2C
SNRPA
C19orf54
TXNIP
NAA80
IFRD2
HYAL3
LOC102724770
DGCR6
IP6K1
ZNF331
PRLH
HES4
PFDN4
MAPKAPK3
CISH
BCAS3
MAP4K1
EIF3K
TMEM185B
RGS20
ATP6V1H
YBX2
PTEN
KLLN
LRCOL1
P2RX2
TNNI3
DNAAF3
SPNS1
LAT
ARRDC4
RPS11
RPL13A
PPP1R3C
GYG1
SERINC4
SERF2
HYPK
WDR62
THAP8
TMEM265
PHKG2
TMEM18
PLEKHG5
UBAP2L
C1orf43
PRDX6
B3GNTL1
ISOC2
NOP14
GRK4
SLC20A1
ILF3
SLC25A26
PNPLA7
MRPL41
TUBGCP5
FNIP1
ATAD3A
SPHK2
SPPL3
TRIM59
MRPS23
KLF1
GCDH
DNASE2
HIF1A
USP8
ZNF438
KDM4C
TBCEL-TECTA
TBCEL
SLC25A13
UBE2Q1
CHRNB2
ZSWIM1
SPATA25
NEURL2
CTSA
NPR3
CCDC200
BCAM
ADNP2
SLC22A5
RIN1
ATP6V0C
AMDHD2
ZNRF2
GMFB
STAT6
USP32
HERC3
PRR5L
COMMD9
ZMYM4
FOSL1
FIBP
CCDC85B
FAM117B
PMS2
AIMP2
RRAGB
CLN3
APOBR
RAB17
PC
DPP3
CREBRF
RMND1
ARMT1
TIMM22
ABHD11
PDE12
BAX
TEKT3
TRMO
FOXO6
MAP1LC3B
FBXO31
IGSF21
SLC25A11
RNF167
PFN1
GP1BA
SLC25A36
EPM2A
NUDCD3
CSTF1
AURKA
NME1
MTHFD1L
SUMF1
CCDC24
SENP8
MYO9A
DBNL
LCN12
FBXW5
C8G
MYDGF
IREB2
FZD1
CFAP251
GTF2A1
CAMKK1
KDM6B
LYRM9
NAPRT
MROH6
ZZZ3
LRFN4
TBC1D13
CEP63
ANAPC13
ADGRB1
LSM12
G6PC3
PIM3
SBNO2
EFR3B
THAP5
DNAJB9
RTEL1
MTERF4
KLF11
HEXA
THRAP3
NXT1
GZF1
CTTN
DACT3
SEL1L2
MACROD2
PUM2
ATXN2
DPH2
B4GALT2
ATP6V0B
TACR2
TCP11L2
LAMC1
EPB41L4B
PPL
GABARAP
PHF23
DVL2
TRIM8
GFRA3
ZNHIT1
PLOD3
TMEM231
GABARAPL2
AEN
POLG2
DDX5
CEP95
KLHL12
FAM214A
RFESD
LPCAT1
CEBPB
TLE6
HES1
TOR2A
KCNIP2
SLC25A10
MRPL12
UTP18
MBTD1
ZBTB37
MAL2
PEX14
DFFA
MTCH2
CLN8
EIF4G1
MIOX
ADM2
VPS33A
TSEN34
MBOAT7
TMC4
MAX
SLC49A4
HSPBAP1
ZNF263
PPFIA4
ATOH8
SYCP2
PPP1R3D
FAM217B
TBC1D17
PNKP
AKT1S1
WDR89
ANKFY1
MVB12A
ISG20
ZNF706
RNF223
GPD1
COX14
ADGRE5
SYNGAP1
PHF1
CUTA
RRP36
MEA1
SPTBN4
BLVRB
OSBPL1A
ARF3
HNRNPH2
GLA
SCAMP4
ADAT3
AFAP1
CCNB1
ASPH
GCLC
PLA2G1B
MTDH
TMEM52
CALML6
GREB1
PKD1L3
DHODH
XRN2
POLI
INO80
SRP54
SPAAR
HRCT1
HBP1
DLX4
ZC3H4
FRG2
USP36
RIMBP2
GBE1
SGO1
CCDC86
TBX2
TMEM129
TACC3
SLBP
SLC2A4RG
LIME1
ELF3
TJP2
ARID3A
PSME3
BECN1
POR
RPEL1
RRAGC
ZNF84
STRIP1
C1orf174
DISP3
GGA2
STMN1
GSTP1
LGI1
FAM178B
STYXL1
MDH2
YARS1
S100PBP
ESYT3
MAPK15
ZHX2
STXBP4
COX11
SCAF11
INSIG2
SLC26A8
MAPK14
FOXN4
SPG7
IGFL1
HUWE1
G3BP1
NDUFS6
MRPL36
TXNRD1
SRA1
SLC35A4
APBB3
ALG13
NPIPB15
RAD50
TBC1D15
MTRNR2L1
UCKL1
NFX1
CNNM2
PRRG2
NOSIP
FLCN
SLC12A4
EIF3B
MEFV
H4C9
H2BC12
H2AC12
DGAT2
SMARCD2
CYB561
CPNE7
YDJC
CCDC116
TMEM88
NAA38
CYB5D1
LTV1
EIF4A1
CD68
PABPC1
PNPO
ATP13A3
TIPARP
COPS7A
OR2B11
CBFA2T2
THNSL1
SOCS5
ATIC
ERGIC2
HS3ST3B1
PPAT
PAICS
PDP2
C15orf39
RNF13
HSF2
NTMT1
C9orf50
KDM2A
MUC3A
PACSIN3
PIK3R3
TRIB1
CLTC
TMEM53
ARMH1
ABCA3
NAT10
SLC25A39
CD164
TATDN2
TDRD1
CCDC186
KCNA2
UBR5
STX6
TOP3A
SMCR8
ERCC1
JUNB
CCDC6
TBC1D30
GNS
CNOT3
RBBP6
ZNF219
TMEM253
OPRL1
RGS19
LKAAEAR1
STX16
PRPF3
EXOSC5
BCKDHA
SIT1
CCDC107
ARHGEF39
PPM1H
CHFR
RRP9
PARP3
NAMPT
DHX40
MFSD4B
GALNT18
RPSA
PDPR
ORC4
MBD5
UPF3A
PRSS16
ZNF285
FAM214B
KPNA3
DCBLD1
NSUN3
DHFR2
METAP1D
DEF6
TRAF3IP3
TIPIN
SYNRG
CIB3
SLC25A19
PPP4R3B
CC2D1B
ZFP36
PLEKHG2
HES7
ALOXE3
TRIP6
SRRT
ADCK1
ZBTB6
RC3H2
ZNF57
PDK2
NCOA3
CMC2
CENPN
TENT5B
SHOX2
RCHY1
HNRNPA1
CBX5
CA4
CENPA
RTN4RL1
DPH1
APPBP2
NECTIN4
KPNA2
TARDBP
HPS1
SLC25A25
CD37
UBN1
GLYR1
LFNG
ALCAM
SLC39A6
ELP2
ARL4A
GOLIM4
SLC5A6
CAD
ATRAID
CASTOR1
MED16
NAPA
TANC2
ASB2
DEFB116
SLC35E3
UCP2
IQSEC1
SLC12A6
NUTM1
NOP10
TMEM184A
TPD52L2
ABHD16B
PARD6B
SMIM41
ATG101
BCAS1
TOR3A
ILVBL
NFKBIL1
DDX39B
ATP6V1G2
WDR77
ATP5PB
HDAC4
MLH1
EPM2AIP1
CSRNP1
YIF1A
TMEM151A
C5orf51
VILL
SPATA2L
ZFPM1
AIG1
SETD6
PTCD3
POLR1A
CHKA
ATF7-NPFF
ATF7
LIN54
TBL1X
SNAI1
MARCHF8
PPM1D
PRKAR1A
DDX3X
PPP1R10
MRPS18B
ATAT1
CMTR2
PSMD6
KCTD9
CDCA2
NCOA4
SCAP
POLR1D
LNX2
TMEM79
SMG5
MAP11
LAMTOR4
NUP188
DOLK
ACAD9
L3HYPDH
JKAMP
SPAG9
GPRASP1
TNPO2
YOD1
PFKFB2
USP17L22
USP17L21
USP17L20
USP17L12
ZNF286A
SLC26A9
BCAS4
FBXO5
MAGT1
COX7B
TRAPPC9
MYL12A
MICOS10-NBL1
MICOS10
AGPAT2
MICU1
RCCD1
SLC35E2A
WDSUB1
PNO1
ATP5MC1
MRPL45
PUF60
ATP9B
SAC3D1
MCCC1
PLD3
C19orf47
TMEM248
BTBD10
ADK
VMP1
PTRH2
RAB24
PRELID1
MXD3
C9orf62
PLEC
ZNF778
LAMTOR1
ANAPC15
SNAPC1
SF1
COA7
HMGN2
MRPL40
HIRA
PRKAG2
RNF26
C1QTNF5
FCMR
MTMR14
LONP1
CATSPERD
GIPC1
HNRNPD
DOK7
SUPV3L1
LOC112577592
TET3
UTP20
SIRT1
TIMM44
SOX12
WASHC4
ACAP2
SKA3
MRPL57
FAM200B
PSMG1
PFAS
CTC1
FBXO33
ATL2
SLC39A2
METTL17
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MEF2D
ATAD2
WIPI1
RBBP8NL
SLC45A4
DYRK3
GDI2
NMRAL1
HMOX2
NRAS
TSTD2
NCBP1
SPTSSB
DCAKD
STAT1
AMMECR1L
NUDT1
MRM2
MAD1L1
ERICH6
FAF1
CDKN2C
VPS8
PDIA4
NRDC
CDC5L
TCERG1
COLEC11
TAF1
SNX8
ADGRE2
TSPYL6
LOXL3
DOK1
PPIA
SLC39A4
CPSF1
SETD4
CBR1
STXBP1
BNIP5
PRORP
PPP2R3C
SLC25A41
KHSRP
ZFP62
SH3GL3
NOCT
TTC32
TCFL5
PTDSS1
PRR7
MTERF3
DBN1
NPM1
MAF1
CYC1
HSPH1
LPIN3
TMEM94
ZBTB10
ARMCX5-GPRASP2
ATP6V1C1
GPRASP2
BHLHB9
CCNA2
DDX42
CCDC47
GPHN
MDN1
CASP8AP2
LARP1
RSAD1
FOS
FNTB
C6orf62
NADK
RGS22
SPATC1L
IRF2BP1
PDXDC1
CALM2
PKNOX1
DCLK2
SNX16
GSKIP
ATG2B
DHDDS
CDIPT
GLS
PGP
E4F1
BRICD5
HPSE
SH3BP2
FZR1
DOHH
RAD23A
CALR
LRP6
MADD
ZBTB7B
LENEP
MUC20
DNAJB5
CHST5
TM4SF1
PSMG4
OR11H4
BCL6
LUC7L2
ZNF408
ARHGAP1
UGDH
WTAP
SOD2
XKR9
LACTB2
TUBD1
RPS6KB1
FUBP1
DNAJB4
CAMLG
GPSM2
PELP1
ARRB2
METTL1
EEF1AKMT3
CYP27B1
DUSP7
MYEOV
RPP25
EHMT1
ARRDC1
PTPRH
RNF34
RAB40B
CAMKK2
EIF3E
RNFT1
PHACTR3
COL26A1
MESP1
RBBP5
RPS29
BMF
PPP1R32
MCCC2
SRSF10
LOC102723996
ICOSLG
RPL27
IFI35
PYCR3
GFUS
BCL9L
PPP1R13L
POLR1G
BRWD1
MET
WDR74
STX5
CNPY2
AKAP10
TCTEX1D4
PLK3
BTBD19
ZNF165
OR1F12
GSTT2B
DDTL
DDT
UNC93B1
GSTT2
ALDH3B1
WDR25
WARS1
TWIST2
PPM1A
ABHD2
C12orf45
FKBP4
TMEM164
VEGFB
PPP1R14B
LOC114841035
FKBP2
OSBPL2
STMN3
TFF1
GIT2
ANKRD13A
CACHD1
ROPN1B
TMEM80
DEAF1
STAG1
SIDT2
TPTEP2-CSNK1E
ANKRD40CL
FURIN
FGGY
COQ10B
PES1
STK35
HOXB8
HOXB7
HOXB6
FOXRED2
RMND5B
GRIA1
PUSL1
CRYM
ACAP3
RBM15
GATA5
SLC36A1