ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466113 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◣ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

DUX4
SPATC1L
ADAMTSL1
FRG2C
CABCOCO1
TNFRSF19
MTRNR2L1
SP2
DPH6
EVI5L
CCDC200
EMCN
FAP
NAV3
UNK
H3-3B
UCKL1
SLC8A1
DNM2
COL23A1
CLPB
H4C3
H1-6
VPS50
HEPACAM2
ID3
H4C12
H4C11
H2BC14
H2AC14
DDX49
COPE
NAA80
IFRD2
HYAL3
FEM1A
FRG2
KATNB1
OR4M1
BOD1
RFX1
PHF12
NEBL
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
IRF2BP2
EHF
RBBP5
SUCLG1
CALCOCO1
FBXL19
EAPP
ARID5B
THRAP3
TMEM115
NPRL2
CYB561D2
LOC102724770
DGCR6
ID1
RAB5B
PMEL
CDK2
ARHGAP35
AP2S1
ING4
MALL
SP1
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
TEPSIN
NDUFAF8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UBE2T
PPP1R12B
TCEA2
RWDD1
RAG2
IFTAP
HIKESHI
MAPKAPK5
GALM
CHMP4B
POLR3F
DZANK1
TBL1X
WDPCP
MDH1
YJU2
PES1
PEX14
DFFA
PAFAH2
WDR74
STX5
OR4Q3
KHSRP
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
PRCC
CALR3
C19orf44
SLC39A1
CRTC2
CREB3L4
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
PAK1IP1
C6orf52
TSN
TESK2
MMACHC
CCDC163
NUDCD1
CIC
TSC2
NTHL1
TP53I3
SF3B6
FAM228B
MAMDC2
MTOR
TMEM70
ELOC
GSPT1
ZNF547
TRAPPC2B
CCAR2
C8orf58
PHB
SUPV3L1
H2BC4
H2AC6
SLC25A25
NAIF1
NUP205
S1PR4
NCLN
TSNAXIP1
RANBP10
POLDIP3
SMPD3
DDX23
C1orf159
KRT39
ANKHD1-EIF4EBP3
ANKHD1
AURKAIP1
RPL32
SP5
PHRF1
RNASEH2A
PRDX2
TRIP10
GPR108
TXNRD1
RARB
ST3GAL2
MEIS1
ZFYVE1
UNKL
C16orf91
BOLA2-SMG1P6
UBQLN4
LAMTOR2
ZNF513
SNX17
EIF2B4
TRDMT1
RPS20
NFIB
BMF
MRPL24
HDGF
VIPAS39
AHSA1
SART3
ISCU
BANP
TSSC4
GSK3A
ERF
TOM1L2
DRC3
LRCH4
FBXO24
TMEM208
LRRC29
ORMDL3
GSDMB
ZNF17
SYMPK
FOXA3
VCPIP1
C8orf44-SGK3
ZNF608
BMP5
OR4N2
SPAAR
HRCT1
BUB1B
GPR137
NUP107
CYCS
INVS
ERP44
KBTBD6
LSG1
PARP16
SIRT4
VARS2
GTF2H4
HNRNPC
G3BP1
TBL1XR1
TMEM262
KIAA0895L
EXOC3L1
ELMO3
E2F4
BCL3
WT1
STAM
UFSP2
C4orf47
METTL3
OSBP
H2BC15
H2AC15
SEC11C
ZMYND10
ZNF225
NLK
CCDC146
OLFML2A
NR6A1
RXFP4
KHDC4
SIRT2
NFKBIB
EIF2AK3
PNKD
GPBAR1
AAMP
PPRC1
PRR14
FBRS
KIF2C
ZNF548
ZNF691
RPS7
TMEM107
TAF12
PEMT
LARS1
RPS3
NFKBIL1
DDX39B
ATP6V1G2
SRD5A1
ZNF585B
ZNF383
CNIH4
TMTC3
CEP290
SUPT7L
SLC4A1AP
SUFU
ACTR1A
RPL36
MICOS13
HSD11B1L
CDK5RAP2
CLN3
APOBR
TRMO
THRA
MED24
TRAF7
RAB26
DSTYK
TULP2
NUCB1
MTRNR2L2
MSH3
DHFR
MRPL53
MOGS
PRR5L
COMMD9
TM4SF18
RPIA
EMP3
ISY1-RAB43
ISY1
EXOC4
ZNF268
CACTIN
UBR2
SPSB3
MRPS34
EME2
STT3A
RGS14
LMAN2
SAMD1
MISP3
C19orf67
TSPO
MCAT
PIN4
ARID2
TIMM21
FBXO15
NUF2
BAZ2A
ATP5F1B
ZNF56
RTRAF
RTF2
SCAF1
RRAS
ZC3H10
RPL41
ESYT1
NDUFS3
KBTBD4
FAM180B
OAZ3
MRPL9
WDR46
RGL2
PFDN6
BAHCC1
UBE2I
TFPT
PRPF31
ZNF140
SNAP25
SLX4IP
MKKS
PEAK1
HMG20A
DOK3
DDX41
MTRNR2L8
CCDC90B
COMMD1
CCT4
AK2
COX16
TTC33
TGIF1
EXD2
GATB
INTS9
HMBOX1
SSR3
UBC
ING3
TRAPPC6B
PNN
SHC1
FLAD1
CKS1B
ZNF417
ZNF576
IRGQ
FAM187A
EFTUD2
CCDC103
ZSWIM3
ACOT8
NDUFC2-KCTD14
NDUFC2
VTI1B
NVL
RIIAD1
MAP2K3
IRF2BPL
CELF3
VWA5A
KRT23
ZNF143
FASTKD1
HNRNPL
UFD1
CDC45
CP
MED27
ZNF337
CCDC124
TMEM94
NME1-NME2
NME1
PHB2
BTRC
FAM168A
GTF3C3
C2orf66
SEL1L
ZNF500
ZNF776
LAMP1
SLC35B1
TMEM160
HEXIM2
BCL2L1
AP1G1
DHX33
RPL27
IFI35
ZNF384
RBL1
ID2
SNX16
VMO1
PSMB6
GLTPD2
ZMAT2
HARS2
HARS1
DCP1B
KRT19
KRT15
NDUFB3
FAM126B
SLC25A19
GRAMD2B
TTI2
TCERG1
NUDT13
PXMP2
POLE
TMEM60
PHTF2
SPHK2
RPL18
FAM83E
CCP110
PSMD11
TSNAX
RPS13
TXNDC2
SNX1
CIAO2A
FARSB
ANAPC5
COX7C
JOSD2
ASPDH
TRIP4
PCLAF
MRI1
C19orf53
RANBP2
PROSER3
LIN37
HSPB6
PSENEN
RPS27A
CLHC1
RABAC1
ZSCAN5A
RNF121
LOC100133315
GBA
HMX2
BUB3
MARS1
ARHGAP9
TMEM79
SMG5
ZNF444
OST4
KHK
EMILIN1
ZNF48
TBC1D10B
MYLPF
SEC13
DLGAP1
GABPB2
TMEM242
H3C4
H4C5
H2BC7
H2AC7
ARL4C
USP17L22
USP17L21
USP17L20
USP17L12
RPS23
ATP6AP1L
TBL3
RPS2
RNF151
NOXO1
ART1
WDR83OS
WDR83
PKLR
MAN2B1
FDPS
SLC35E2B
NDC80
METTL4
PRORP
PPP2R3C
TM9SF4
TRIM55
C12orf43
TARBP1
SYNGR4
ZNF565
ZNF146
MRPL44
ZNF687
SCRIB
ZNF335
EIF3F
SRSF11
LRRC40
RPS6KB2
PTPRCAP
EXOSC5
BCKDHA
MRPL28
WFIKKN1
METTL26
ZNF552
GEMIN6
DYNC1I2
NFATC2IP
SPC25
FOS
SAP30BP
RECQL5
FAM156B
FAM156A
HDAC9
LMNB2
GOSR2
SUGP1
MAU2
PNPLA6
REXO1
PIGL
NCOR1
SSBP3
EIF4A1
CD68
ZC3H6
NCDN
KIAA0319L
CDK8
RPL29
PHF23
GABARAP
DVL2
UBAC1
STIP1
IPO13
CTU1
TPRKB
ZNF584
ZNF419
RANGAP1
MAMSTR
FOXP2
WBP2
PRRG2
NOSIP
PANK4
HES5
MITD1
HSPA9
SART1
ATG4C
ZNF165
OR1F12
MED6
CCDC174
DCAF7
CGGBP1
NWD1
C3orf38
ATXN2L
PEX2
STK36
RNF25
TMEM109
PRPF19
SNAPC3
IFI44L
DDR2
ZNF235
CAND1
SMAD3
GET3
SHPK
CTNS
SREK1IP1
CWC27
MPV17L2
CSTF1
AURKA
ZBTB45
SLC27A5
PEX26
ELP5
CTDNEP1
ZSCAN22
RAB11B
AHCYL2
PCBP1
MRPS7
MIF4GD
GGA3
CDCA8
C1orf109
CD2BP2
MTMR9
TMCO6
NDUFAB1
NDUFA2
IK
C19orf48
GNG14
FBXW9
MRPS18C
HELQ
FBXW11
SULT2B1
SLMAP
HIRIP3
CPA2
SEC61B
ALG2
CTDP1
RPL18A
ZNF688
TAF6
PNISR
MBLAC1
IDH3B
DESI2
CNPY4
ATG9B
ASB4
ABCB8
PSPN
ALKBH7
DHX8
NR1H3
ACP2
PPIL3
NIF3L1
RPL9
LIAS
USP30
RPS12
IER5L
SMG8
BMERB1
RPL21
NMNAT1
LZIC
HEXB
SH3RF2
MYEOV
AMOTL2
SF3B3
COG4
VPS4B
UBQLN1
CEP128
SSBP1
UTP11
FHL3
CWC22
ZNRF3
SACS
NDUFAF5
ESF1
TMED10
SPEG
NXNL2
NSA2
GFM2
SYP
PRICKLE3
SESN1
CEP57L1
GORAB
GCG
POLR2E
GPX4
KMT2B
CENPA
RFC4
PTBP1
KRI1
DPH2
CDKN2D
B4GALT2
ATP6V0B
KRR1
NMT1
DCAKD
WNK4
VPS25
SLC39A9
ERH
ZNF112
ZBTB12
NGDN
EHMT2
DEXI
CLEC16A
C2
ZFPL1
CDCA5
SPNS1
LAT
AP5S1
HBP1
PTCD3
POLR1A
MVB12A
C10orf143
UTP3
PPP1R12C
COPS7A
SF3B5
TDG
NUP214
NOLC1
C12orf73
RBM42
LYRM4
FARS2
RPS26
GTF2IRD1
NDUFB5
MRPL47
XPNPEP3
ST13
DNAJB7
TPGS1
PRKCI
HSPA13
HMGA2
BCAS2
USP17L18
USP17L13
USP17L11
USP17L10
RNF187
PTPN6
CRADD
C12orf57
BET1
ZNF420
SPAG7
RBM6
N4BP2L2
MON1A
GTPBP3
B4GALT5
ANO8
NTMT1
C9orf50
TRMT2A
RANBP1
DARS2
CENPL
EMC4
LTA4H
ZFP36L1
TACO1
ZNF76
TIMM13
SLC4A2
RPA2
NOP53
CREM
CHD8
CDK5
ASIC3
PPP6R1
RPGRIP1L
FTO
VXN
UQCRH
MBD1
LRRC41
FERD3L
CXXC1
PTPRH
MT2A
ZKSCAN8
CNOT1
SNRPB
WASF1
RNF5
HEXIM1
CDC40
AGPAT1
AGER
ALG10B
USHBP1
BABAM1
MRPS23
CSTF2T
GSTO2
ZRANB2
EIF2S3
SNRPD3
GUCD1
ZMYND15
RHBDD3
MED11
HSPA1B
GPATCH1
EWSR1
CXCL16
SMARCAL1
TLE3
NRL
DCAF11
PARP2
CCNB1IP1
PPP1R9B
GPKOW
EIF1AD
CST6
BANF1
ZNF221
OXSR1
H2BC21
H2AC21
H2AC20
IRAG1
ZBTB5
MRPL1
LENG1
ZNF514
ZNF2
SERP1
PPWD1
EIF2A
CENPK
IER3
FLOT1
RBM28
MRM3
GLOD4
SNRPE
NRDE2
GID4
ATPAF2
CAPN15
THYN1
KCNJ14
GRWD1
ACAD8
CWF19L1
CCDC59
TTC31
CCDC33
CCDC142
ADO
ZMAT5
UQCR10
RACGAP1
PITX3
PHF5A
GBF1
CLTC
ACO2
TPD52L1
C6orf47
BAG6
APOM
ZNF850
PMEPA1
POLG2
ICE1
DDX5
STAM2
RDH5
MED20
ITGA7
BYSL
BLOC1S1
PABPN1
WDR97
MAF1
CYC1
SEC24C
ZMYND8
VPS52
RPS18
B3GALT4
PAN2
IL23A
TXNL4B
DHX38
DOLPP1
PPIG
CEP162
ZDHHC5
CLP1
TMEM63C
PAF1
RPF1
SLC25A42
MOCS3
DPM1
RBM15
PEX12
AP2B1
SOX15
MPDU1
LOC100996842
KIF5C
LY6L
ADAMTS9
SF3A3
RGPD2
RGPD1
TXNDC5
IL32
FRMPD4
TIPARP
ZBTB38
ARHGEF9
MTRNR2L9
TNFRSF12A
THOC6
HCFC1R1
CLDN6
MRPL21
IGHMBP2
STX16
INTS1
NDUFS7
PWWP2A
ZFYVE19
NPAS4
DNAJC17
ANKRD28
PCM1
TATDN3
NSL1
ATP6V1G1
EMILIN2
MTRNR2L10
GTPBP6
H4C8
SLC25A20
TINF2
NEDD8-MDP1
NEDD8
GMPR2
TAOK3
SUDS3
PHF19
PPP5D1
CALM3
NPIPA1
RPL35A
IQCG
HNRNPUL1
FNDC3A
NOC4L
DDX51