ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11525509 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◣ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
KIF5C
MTRNR2L8
FRG2C
ADAMTSL1
CABCOCO1
SPATC1L
COL23A1
TNFRSF19
MAMDC2
SP2
FAP
FRG2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
NAV3
EMCN
DDX23
H4C12
H4C11
H2BC14
H2AC14
DPH6
CLPB
KATNB1
EVI5L
BOD1
SLC8A1
TMEM242
VPS50
HEPACAM2
UNK
H3-3B
DNM2
EAPP
TMEM115
NPRL2
CYB561D2
CALCOCO1
DDX49
COPE
H4C3
H1-6
CHMP4B
SP1
POLR3F
DZANK1
TCEA2
FEM1A
NAA80
IFRD2
HYAL3
PHRF1
TBL1X
RWDD1
EHF
PHF12
H2BC4
H2AC6
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FBXL19
ARHGAP35
AP2S1
TSN
ARID5B
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
LOC102724770
DGCR6
IRF2BP2
RBBP5
MAPKAPK5
OR4M1
CCDC200
KHSRP
CIC
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
GALM
PHB
THRAP3
TSNAXIP1
RANBP10
MRPL24
WDPCP
MDH1
HDGF
FAM168A
BANP
IL32
PEX14
DFFA
RPS20
PRCC
TESK2
MMACHC
CCDC163
PAFAH2
PPRC1
ARID2
RFX1
ID3
YJU2
TEPSIN
NDUFAF8
SUCLG1
S1PR4
NCLN
NUDCD1
CALR3
C19orf44
NEBL
ST3GAL2
HIKESHI
ZFYVE1
CCDC90B
PAK1IP1
C6orf52
TOM1L2
DRC3
TSC2
NTHL1
ANKHD1-EIF4EBP3
ANKHD1
ADAMTS9
ORMDL3
GSDMB
SLC25A25
NAIF1
NPIPA1
TMEM208
LRRC29
SPSB3
MRPS34
EME2
SNX16
RAB5B
PMEL
CDK2
OR4Q3
BMF
PANK4
HES5
INVS
ERP44
LRCH4
FBXO24
GSPT1
ZNF17
CCDC146
UBE2T
PPP1R12B
SMPD3
COX16
RAG2
IFTAP
WDR74
STX5
PRR5L
COMMD9
HNRNPC
VIPAS39
AHSA1
NDC80
METTL4
TAF12
PEMT
RPS3
ART1
PES1
SPAAR
HRCT1
PIGL
NCOR1
ZNF417
ING4
ID1
UCKL1
SP5
PRR14
FBRS
GBA
MTOR
PNKD
GPBAR1
AAMP
BUB1B
STIP1
NUP107
UNKL
C16orf91
GATB
INTS1
OST4
KHK
EMILIN1
GPR137
PIN4
ZNF268
BMP5
ZNF608
WT1
NOP16
HIGD2A
SRSF11
LRRC40
RXFP4
KHDC4
TP53I3
SF3B6
FAM228B
TMEM262
ZNF513
SNX17
EIF2B4
CNIH4
ZFPL1
CDCA5
LY6L
TACO1
ZNF140
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SYMPK
FOXA3
PARP16
MRI1
C19orf53
RARB
DOK3
DDX41
H2BC15
H2AC15
MALL
TMEM70
ELOC
CP
SNAP25
CEP295NL
LARS1
RPS7
OSBP
SF3A3
GSK3A
ERF
KIAA0895L
EXOC3L1
ELMO3
E2F4
TTI2
INTS9
HMBOX1
RPL32
MED27
CCNL1
ZNF211
TFPT
PRPF31
CYCS
DYNC1I2
SLC39A1
CRTC2
CREB3L4
TINF2
NEDD8-MDP1
NEDD8
GMPR2
NOC4L
DDX51
RCAN1
DMAC1
MTRF1
ZNF547
TRAPPC2B
TSSC4
TBL1XR1
ZCCHC4
SCAF1
RRAS
ZNF225
VARS2
GTF2H4
SEC11C
TMTC3
CEP290
SSBP3
RANBP2
SPHK2
RPL18
FAM83E
ZSWIM3
ACOT8
COX7C
STK25
ZNF687
NDUFB5
MRPL47
ZC3H12A
NUDT13
TULP2
NUCB1
SMARCAL1
GUF1
UBQLN4
LAMTOR2
ZNF165
OR1F12
CAND1
STAM
NDUFAF5
ESF1
TBP
PSMB1
KIF2C
HMX2
BUB3
H3C4
H4C5
H2BC7
H2AC7
WDR46
RGL2
PFDN6
VMO1
PSMB6
GLTPD2
TCERG1
ZCCHC8
MEIS1
RPS6KB2
PTPRCAP
PNPLA6
TRIP10
GPR108
SMG8
SHPK
CTNS
KMT2B
VARS1
VRK1
OR4N2
TMEM107
OAZ3
MRPL9
KBTBD6
METTL3
ZMAT2
HARS2
HARS1
USP17L22
USP17L21
USP17L20
USP17L12
FCF1
AREL1
NUP205
COMMD1
CCT4
TIMM21
FBXO15
EMC4
TOR1AIP2
TOR1AIP1
PLEKHM3
SLC35E2B
PROSER3
LIN37
HSPB6
PSENEN
GTF3C3
C2orf66
PPP1R12C
GSTO2
HDAC9
PHB2
BCL2L1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
TRDMT1
SIRT4
ZMYND10
ANAPC5
VWA5A
C12orf43
MRPL28
RHOT2
RHBDL1
HEMK1
C3orf18
KRT39
TBL3
RPS2
RNF151
NOXO1
ZFYVE19
DNAJC17
KRT19
KRT15
ZSCAN22
OLFML2A
NR6A1
ARL4C
ZNF605
ZNF628
NAT14
NUF2
RPL36
MICOS13
HSD11B1L
AK2
TM4SF18
MITD1
ABT1
NDUFS3
KBTBD4
FAM180B
UFD1
CDC45
MRPL53
MOGS
NFIB
AHCYL2
SSBP2
RPL37
CARD6
UBR2
CDK5RAP2
ZNF286A
POLDIP3
CTU1
BAZ2A
ATP5F1B
ATP5MG
EIF4A3
PSMD11
NFKBIL1
DDX39B
ATP6V1G2
ZNF337
WNK4
VPS25
ZNF585B
ZNF383
GTPBP6
HMOX1
PSPN
ALKBH7
SEL1L
ZSCAN32
ZNF174
CCDC174
ATP6V1G1
UBAC1
HEXIM2
PTPRH
FARSB
PEX3
ADAT2
DBP
CA11
GOSR2
TATDN3
NSL1
TMEM94
UFSP2
C4orf47
CD79A
ARHGEF1
TXNDC2
RPL14
AURKAIP1
PTDSS2
ANO9
LSG1
C1orf159
RAB5C
ZC3H10
RPL41
UTP11
FHL3
CD2BP2
CRADD
RABL2B
BAHCC1
FAM187A
EFTUD2
CCDC103
NMT1
DCAKD
ZNF500
FASTKD1
G3BP1
SUFU
ACTR1A
ZNF776
SEC13
TIMMDC1
DCAF7
CLN3
APOBR
TLE3
NLK
SIRT2
NFKBIB
KCTD5
PRRG2
NOSIP
SSR3
STT3A
ZNF444
SART3
ISCU
VCPIP1
C8orf44-SGK3
DLGAP1
DSTYK
STX16
BCL3
SELENOH
SLX4IP
MKKS
SMARCD2
HEXB
TRAPPC6B
PNN
PDE6D
COPS7B
TRMT10C
THAP11
COX7A2L
TSNAX
TMEM60
PHTF2
NME1-NME2
NME1
SMAD3
USHBP1
BABAM1
EXD2
KRT23
TRAPPC3
MAP7D1
ZNF48
TBC1D10B
MYLPF
ZNF124
MT2A
ZNF143
HEXA
SHC1
FLAD1
CKS1B
RGS14
LMAN2
SAMD1
MISP3
C19orf67
RPL18A
FBXW11
SPDYE7P
POM121
LMNB2
CCAR2
C8orf58
SUPT7L
SLC4A1AP
TRAF7
RAB26
EMP3
API5
EXOC4
VEZT
FGD6
MTMR9
SUPV3L1
RPIA
H4C8
SUGP1
MAU2
CTDP1
COPS7A
SNX1
CIAO2A
SNX15
ZNF235
LTN1
MRPL21
IGHMBP2
ZNF420
ZNF26
MRPL20
CCNL2
RBM42
ZNF384
THAP1
SSBP1
KRR1
PWWP2A
RNF121
LOC100133315
TARBP1
RBM25
TMX2
MED19
EIF3F
TAOK3
SUDS3
SCYL3
CDCA8
C1orf109
ZNF688
SLC35B1
SCRIB
SRD5A1
ZNF226
EIF2AK3
RPL27
IFI35
TPRKB
ZBTB45
SLC27A5
MARS1
ARHGAP9
DYNC2I2
PABPN1
TMEM63C
GET3
MPV17L2
TXNL4B
DHX38
CCDC59
PRR22
DUS3L
ING3
RPL21
ZKSCAN8
RGPD2
RGPD1
TXNDC5
TXNRD1
FRMPD4
TIPARP
CACTIN
ZBTB38
ARHGEF9
RNASEH2A
PRDX2
MTRNR2L9
VTI1B
UTP3
PTPN6
RAB11B
ZNF335
SEC61B
ALG2
POLR2E
GPX4
REXO1
ZNF576
IRGQ
ISY1-RAB43
ISY1
C19orf48
NDUFS7
NPAS4
UBE2I
HNRNPL
SYP
PRICKLE3
ANKRD28
PCM1
CCP110
EMILIN2
MTRNR2L10
RPS27A
IPO13
CLHC1
SLC25A20
PCBP1
EXOSC5
BCKDHA
PHF19
MRPS7
MIF4GD
GGA3
PPP5D1
CALM3
RPL35A
JOSD2
IQCG
HNRNPUL1
FNDC3A
ASPDH
CAPN15
ZNF691
C5orf38
RPL9
LIAS
STK36
RNF25
RBL1
PPP6R1
TRIP4
PCLAF
MRPS23
TRMO
TOP2A
PLA2G4A
DHX8
CLCN5
RPAIN
NUP88
ZAR1
IRAG1
PEAK1
HMG20A
LYRM4
FARS2
RGS19
OPRL1
LKAAEAR1
AP2M1
MRPS18C
HELQ
TMEM160
USP48
FBH1
ESYT1
IARS2
BPNT1
EPS15
STAM2
UBE2J1
INO80C
IER3
FLOT1
HEATR5B
GPATCH11
SRCIN1
SYT7
SLC39A9
ERH
SLC25A19
OR6B2
NDUFA10
GLIPR1L1
CAPS2
USP30
PRORP
PPP2R3C
PTEN
KLLN
CCL3
UVRAG
TMEM109
PRPF19
PLA2G15
H4C4
H2BC6
AP1G1
NDUFB3
INTS10
FAM126B
ARHGAP17
MYOM2
WDR97
SH3RF2
RNF213
MAF1
CYC1
WFIKKN1
METTL26
GTF2I
FCRL5
CSDE1
TM9SF4
GABPB2
RABAC1
ANGPTL2
USP22
XAB2
STXBP2
PCP2
SESN1
CEP57L1
TOMM40L
ASAH2
APOA2
ARHGEF2
MATR3
BRWD1
TRAPPC9
KLHL29
PSMC5
FTSJ3
DENND1B
GORAB
SF3B3
COG4
B4GALT3
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
SNAPC1
RAD52
LTA4H
HSPA9
CWC27
BMERB1
STAT1
NR1H3
ACP2
SYNGR4
PPP1R2
ID2
CORO1A
ZSCAN5A
NFATC2IP
EIF4A1
CD68
TJP3
SF3B5
NVL
ZC3H6
SIX1
RBM28
TBC1D17
PNKP
ATF4
AKT1S1
RMDN2
CCDC138
CCL3L3
CCL3L1
RPGRIP1L
FTO
MDM2
ENPP4
CLIC5
CGGBP1
ZMYND8
TRIM55
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
XPNPEP3
ST13
PDE4DIP
GCLC
DNAJB7
CCDC110
FAM177B
ZNF548
LNPEP
ATP2C1
ZBTB5
KLF6
TXNDC11
TMEM256
PLSCR3
NLGN2
CHPF2
ABCF2
CENPA
HBP1
THRA
MED24
TEKT2
ADPRS
FUT10
CYTH3
SCT
DRD4
CDHR5
NLRP3
RAP2B
PRDM15
CCL5
ASXL1
ALG10B
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MYEOV
HCAR3
TSPO
MCAT
GUCY2D
DPP9
CNOT1
CCDC39
ADO
UQCRC2
DAGLB
TPGS1
CBWD2
PEX26
ZNF56
TOM1
RTRAF
RTF2
MDM4
IL17A
NPR1
ILF2
GLDN
CCM2
UBE2H
RASAL2
NCOA7
KANSL3
FER1L5
BDH1
TJP1
RUFY3
CRYBB1
VPS52
RPS18
B3GALT4
C1orf198
TTC33
TGIF1
IFNGR2
LOC100130520
KDM6B
CD300H
C17orf77
ZPBP2
USP3
RGS8
IKZF3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
CSNK1G3
WHAMM
FSD2
CHST12
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
RIIAD1
NUP153
MED23
MAP2K3
IRF2BPL
ENPP3
CELF3
NGB
NAT16
FETUB
SLC33A1
CMSS1
BIN2
PARP2
CCNB1IP1
BTRC
SNRPD3
LAMP1
GUCD1