ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466116 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◣ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

DUX4
SPATC1L
FRG2C
CCDC200
SP2
TNFRSF19
FRG2
FEM1A
UCKL1
EAPP
COL23A1
DNM2
NAA80
IFRD2
HYAL3
PAFAH2
UNK
H3-3B
CLPB
RWDD1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C3
H1-6
BOD1
ARHGAP35
AP2S1
LY6L
CHMP4B
SLC25A25
NAIF1
TESK2
MMACHC
CCDC163
DDX49
COPE
PHB
EVI5L
CALCOCO1
FAP
TCEA2
RFX1
FBXL19
H4C12
H4C11
H2BC14
H2AC14
EMCN
RAB5B
PMEL
CDK2
PES1
PHF12
KHSRP
RBBP5
MAMDC2
MTRNR2L1
ANKHD1-EIF4EBP3
ANKHD1
ADAMTSL1
CIC
SUCLG1
BANP
VTI1B
SLC8A1
MALL
PEX14
DFFA
PEMT
VARS2
GTF2H4
CALR3
C19orf44
SP1
HIKESHI
PHRF1
MRPL24
YJU2
HDGF
LOC102724770
DGCR6
WDR74
STX5
RPS7
REXO1
RAG2
IFTAP
ZNF225
FASTKD1
SYMPK
FOXA3
SUPV3L1
TXNRD1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
CORO1A
C19orf48
WDPCP
MDH1
SCRIB
OSBP
POLR3F
DZANK1
UNKL
C16orf91
PNKD
GPBAR1
AAMP
TAF12
CABCOCO1
NUP205
SMPD3
VPS50
HEPACAM2
ING4
TSNAXIP1
RANBP10
NLK
CACTIN
GSPT1
PRCC
KRT39
ID3
SLC35B1
TMEM115
NPRL2
CYB561D2
AURKAIP1
POLR2E
GPX4
H2BC4
H2AC6
RNASEH2A
PRDX2
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
INTS9
HMBOX1
CAPN15
TBL3
RPS2
RNF151
NOXO1
TOM1L2
DRC3
TNFRSF12A
THOC6
HCFC1R1
CLDN6
NEBL
POLDIP3
SLC35E2B
HEXB
PNPLA6
IPO13
PAK1IP1
C6orf52
RBL1
ZNF547
TRAPPC2B
ZNF165
OR1F12
VIPAS39
AHSA1
UBQLN4
LAMTOR2
MAPKAPK5
S1PR4
NCLN
UFSP2
C4orf47
ORMDL3
GSDMB
VCPIP1
C8orf44-SGK3
OAZ3
MRPL9
MRPL21
IGHMBP2
ZFYVE1
SSR3
GALM
BOLA2-SMG1P6
TSN
ZNF268
RANBP2
DSTYK
STT3A
SCAF1
RRAS
ZNF687
PSMD11
SART3
ISCU
RPIA
SEC61B
ALG2
HNRNPL
KAT6B
ZNF585B
ZNF383
USP48
INVS
ERP44
RGS14
LMAN2
ZNF444
BUB1B
NUP153
CCDC90B
TSC2
NTHL1
CLCN5
SUPT7L
SLC4A1AP
RPS20
PCBP1
ARID5B
CCAR2
C8orf58
TMEM94
THRAP3
TMEM208
LRRC29
NMT1
DCAKD
CCP110
RNF213
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
RPL32
UBE2T
PPP1R12B
PRRG2
NOSIP
TFPT
PRPF31
DYNC1I2
MUC20
LARS1
ZNF235
LMNB2
SIRT4
ZNF576
IRGQ
NAV3
DDX23
TBL1X
COMMD1
CCT4
ING3
ZNF691
ZNF143
TSNAX
MRPS7
MIF4GD
GGA3
COPS8
TMEM70
ELOC
ZNF335
TMEM160
IER3
FLOT1
PARP16
HNRNPC
STAM
PRR14
FBRS
C1orf159
NDUFS7
IRF2BP2
SPAAR
HRCT1
RPL36
MICOS13
HSD11B1L
VEZT
FGD6
NUF2
EXOSC5
BCKDHA
STMN3
RTEL1
UBAC1
RBM42
GET3
SESN1
CEP57L1
CWC25
FARSB
KRR1
TAOK3
SUDS3
MTOR
SF3A3
LYRM4
FARS2
ZNF749
SYP
PRICKLE3
RPS27A
CLHC1
NDUFS3
KBTBD4
FAM180B
RNF121
LOC100133315
STAM2
PEAK1
HMG20A
DYNC2I2
RAB11B
TACO1
STK36
RNF25
SIRT2
NFKBIB
PRORP
PPP2R3C
GSK3A
ERF
TRMO
OR6B2
NDUFA10
LRCH4
FBXO24
RGS19
OPRL1
LKAAEAR1
PPRC1
PTMA
FAM118A
ID1
H4C8
TBCK
AIMP1
MRI1
C19orf53
LSG1
TIMM21
FBXO15
TEPSIN
NDUFAF8
OR4N2
PSMD1
PABPN1
KATNB1
ISY1-RAB43
ISY1
ZBTB45
SLC27A5
SLC25A19
ZSCAN22
TM4SF18
G3BP1
MTR
GOSR2
SF3B3
COG4
TEKT2
ADPRS
TRAPPC6B
PNN
UQCRC2
PTGES2
SHC1
FLAD1
CKS1B
CCDC174
RPL9
LIAS
TM9SF4
PSMC5
FTSJ3
TCF3
FAM187A
EFTUD2
CCDC103
TRAF7
RAB26
UBE2I
ZNF605
RPGRIP1L
FTO
ASXL1
MTBP
MRPL13
BMERB1
SF3B5
TINF2
NEDD8-MDP1
NEDD8
GMPR2
JOSD2
ASPDH
NFKBIL1
DDX39B
ATP6V1G2
OLFML2A
NR6A1
NDUFB3
FAM126B
ZFYVE19
DNAJC17
AP2M1
RABAC1
ZNF140
SUFU
ACTR1A
H3C4
H4C5
H2BC7
H2AC7
ZMYND10
UTP11
FHL3
SLC39A9
ERH
SMIM41
ATG101
HDAC9
SREK1IP1
CWC27
KEAP1
TMEM107
TMEM60
PHTF2
WBP1
INO80B
PPP6R1
RPS3
USP17L22
USP17L21
USP17L20
USP17L12
CHPF2
ABCF2
XPNPEP3
ST13
DNAJB7
SSU72
UFD1
CDC45
BMP5
HSPA9
ADO
NDC80
METTL4
HEXIM2
TATDN3
NSL1
VAMP2
PER1
EPHB4
VPS52
RPS18
B3GALT4
CP
HNRNPUL1
UBE2M
CHMP2A
U2SURP
TSSC4
OR4M1
KDM6B
NKX1-1
CNPY2
NME6
HBP1
EIF4A1
CD68
ITGB3BP
EFCAB7
ART1
ZNF614
WDR46
RGL2
PFDN6
SPSB3
MRPS34
EME2
CAND1
RPL35A
IQCG
LMLN
SFR1
SUGP1
MAU2
CTDP1
MRPL53
MOGS
TXNDC2
MRPS23
ZSCAN5A
KIF2C
RPL37
CARD6
VIPR2
SNRPB
PSMB5
PSMB11
EHF
NFX1
KMT5C
COMMD2
ID2
PARP2
CCNB1IP1
MRPS11
MRPL46
TRIM55
SNX16
SNRPD3
GUCD1
PI4KB
UBALD1
MGRN1
DPH6
MTRNR2L2
MSH3
DHFR
MTRNR2L8
KIF5C
TMEM242
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H2BC15
H2AC15
ST3GAL2
TP53I3
SF3B6
FAM228B
ADAMTS9
RGPD2
RGPD1
TMEM262
FAM168A
NUDCD1
TXNDC5
ZNF17
CCDC146
GPR137
OR4Q3
PROSER3
LIN37
HSPB6
TRIP10
GPR108
ZNF513
SNX17
EIF2B4
GBA
SLC39A1
CRTC2
CREB3L4
IL32
FRMPD4
BMF
TIPARP
PIN4
ARID2
GATB
SSBP1
SP5
ZBTB38
CYCS
STIP1
ARHGEF9
NUDT13
AK2
NUP107
RARB
PRR5L
COMMD9
ZNF608
MTRNR2L9
COX16
WT1
UTP3
PSPN
ALKBH7
RXFP4
PTPN6
KHDC4
ZNF417
SPHK2
RPL18
FAM83E
CNIH4
MEIS1
KIAA0895L
EXOC3L1
ELMO3
E2F4
PANK4
HES5
UBR2
ZC3H10
RPL41
TBL1XR1
TRDMT1
BAHCC1
PIGL
NCOR1
ANAPC5
SEC11C
NFIB
DOK3
DDX41
SNAP25
OST4
KHK
EMILIN1
KBTBD6
TMTC3
CEP290
SMG8
METTL3
STX16
TULP2
PSENEN
NUCB1
EIF3F
SRSF11
LRRC40
INTS1
MED27
AHCYL2
NME1-NME2
NME1
SLX4IP
MKKS
TTI2
PWWP2A
ZSWIM3
ACOT8
NPAS4
DCAF7
CDK5RAP2
EIF2AK3
ANKRD28
PCM1
ZFPL1
CDCA5
SAMD1
MISP3
C19orf67
COX7C
ZNF48
VMO1
TBC1D10B
RPL27
PSMB6
MYLPF
IFI35
GLTPD2
ATP6V1G1
EMILIN2
TCERG1
MTRNR2L10
GTPBP6
BAZ2A
ATP5F1B
SSBP3
SMAD3
ZMAT2
HARS2
HARS1
GTF3C3
C2orf66
BCL3
VWA5A
PHB2
BCL2L1
SLC25A20
HMX2
BUB3
PTPRH
KRT19
KRT15
CLN3
APOBR
RPS6KB2
PTPRCAP
PHF19
ZNF337
C12orf43
MRPL28
ARL4C
SEL1L
PPP5D1
CALM3
USHBP1
NPIPA1
BABAM1
FNDC3A
ZNF384
SHPK
CTNS
NOC4L
NDUFAF5
ESF1
DDX51
NDUFB5
MRPL47
CDCA8
C1orf109
MITD1
C5orf38
RHOT2
RHBDL1
KMT2B
ZNF500
EMP3
CTU1
ZNF776
EXOC4
EXD2
SMARCAL1
PPP1R12C
CD79A
ARHGEF1
SRD5A1
EMC4
TRIP4
PCLAF
RPL18A
KRT23
SEC13
COPS7A
GSTO2
WNK4
VPS25
TOP2A
SMARCD2
SELENOH
DLGAP1
PLA2G4A
DHX8
RPAIN
NUP88
ZAR1
CD2BP2
IRAG1
NOP16
HIGD2A
SSBP2
MRPS18C
HELQ
SNX1
CIAO2A
FBH1
ESYT1
IARS2
BPNT1
EPS15
CRADD
UBE2J1
FBXW11
PDE6D
INO80C
COPS7B
ATP5MG
HEATR5B
GPATCH11
SRCIN1
TARBP1
CCNL1
ZNF211
SYT7
MTMR9
TLE3
GLIPR1L1
CAPS2
USP30
RCAN1
PTEN
KLLN
CCL3
UVRAG
MARS1
ARHGAP9
TMEM109
PRPF19
PLA2G15
H4C4
H2BC6
DMAC1
AP1G1
MTRF1
INTS10
ZCCHC4
ARHGAP17
MYOM2
MT2A
WDR97
TPRKB
SH3RF2
MAF1
CYC1
WFIKKN1
METTL26
GTF2I
FCRL5
LTN1
CSDE1
STK25
GABPB2
ANGPTL2
ZNF688
USP22
ZC3H12A
XAB2
STXBP2
PCP2
GUF1
TOMM40L
ASAH2
APOA2
ARHGEF2
TBP
PSMB1
MATR3
ZNF420
BRWD1
ZCCHC8
TRAPPC9
VARS1
VRK1
KLHL29
FCF1
AREL1
DENND1B
TOR1AIP2
TOR1AIP1
GORAB
PLEKHM3
B4GALT3
CCDC124
RPS23
ATP6AP1L
SNAPC1
RAD52
LTA4H
HEMK1
C3orf18
ZNF628
NAT14
STAT1
NR1H3
ACP2
SYNGR4
PPP1R2
API5
RPL21
NFATC2IP
ABT1
TJP3
NVL
ZC3H6
SIX1
ZNF286A
RBM28
TBC1D17
PNKP
ATF4
AKT1S1
RMDN2
CCDC138
CCL3L3
CCL3L1
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
HMOX1
CGGBP1
ZMYND8
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
ZSCAN32
ZNF174
PDE4DIP
GCLC
CCDC110
FAM177B
ZNF548
LNPEP
ATP2C1
ZKSCAN8
ZBTB5
PEX3
ADAT2
KLF6
DBP
CA11
TXNDC11
TMEM256
PLSCR3
NLGN2
CENPA
RPL14
THRA
PTDSS2
MED24
ANO9
FUT10
CYTH3
SCT
DRD4
CDHR5
CCDC59
TMEM63C
RAB5C
NLRP3
RAP2B
PRDM15
CCL5
TXNL4B
TIMMDC1
DHX38
ALG10B
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MYEOV
MPV17L2
HCAR3
TSPO
MCAT
GUCY2D
DPP9
CNOT1
CCDC39
DAGLB
TPGS1
CBWD2
PEX26
ZNF56
TOM1
RTRAF
RTF2
KCTD5
MDM4
IL17A
NPR1
ILF2
GLDN
CCM2
UBE2H
RASAL2
NCOA7
KANSL3
FER1L5
BDH1
TJP1
RUFY3
CRYBB1
C1orf198
TTC33
TRMT10C
THAP11
TGIF1
IFNGR2
COX7A2L
TRAPPC3
MAP7D1
LOC100130520
CD300H
C17orf77
ZPBP2
ZNF124
USP3