ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11525512 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◣ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

DUX4
FRG2C
SPATC1L
MTRNR2L1
MAMDC2
COL23A1
TNFRSF19
MTRNR2L2
MSH3
DHFR
FRG2
LOC102724770
DGCR6
CCDC200
DNM2
LY6L
PAFAH2
SP2
EAPP
DDX49
COPE
PHRF1
UNK
H3-3B
TMEM242
KIF5C
FEM1A
H4C3
H1-6
RFX1
TCEA2
EVI5L
ADAMTS9
CLPB
RWDD1
TESK2
MMACHC
CCDC163
UCKL1
PHF12
IL32
DDX23
GSPT1
PNPLA6
MTRNR2L8
BOD1
SLC25A25
NAIF1
ST3GAL2
ADAMTSL1
NAA80
IFRD2
HYAL3
ANKHD1-EIF4EBP3
ANKHD1
H4C12
H4C11
H2BC14
H2AC14
SCAF1
RRAS
LOC100130520
CD300H
C17orf77
RPS7
CALCOCO1
PHB
SLC8A1
MRPL24
WDR74
STX5
CHMP4B
TXNRD1
PSMD11
FBXL19
ZNF285
CLCN5
RAB5B
PMEL
CDK2
HIKESHI
HEXB
ZSCAN22
ARHGAP35
AP2S1
ZNF268
VPS50
HEPACAM2
CIC
POLR3F
DZANK1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MRI1
C19orf53
ZNF225
CCAR2
C8orf58
OR6B2
NDUFA10
MAPKAPK5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
VIPAS39
AHSA1
SLC35E2B
UBE2T
PPP1R12B
PEX14
DFFA
UNKL
C16orf91
DSTYK
FASTKD1
PNKD
GPBAR1
AAMP
PAK1IP1
C6orf52
BANP
NFKBIL1
DDX39B
ATP6V1G2
TMEM94
KHSRP
RANBP2
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
MRPL21
IGHMBP2
FAP
S1PR4
NCLN
PEMT
SUCLG1
UBQLN4
LAMTOR2
EMCN
NUF2
RAG2
IFTAP
VTI1B
ZNF143
THRAP3
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
YJU2
AURKAIP1
LMNB2
SEC61B
ALG2
NUP205
OSBP
C1orf159
PES1
CABCOCO1
SMPD3
TSNAX
NAV3
TMEM115
NPRL2
CYB561D2
IRF2BP2
SYMPK
FOXA3
PRRG2
NOSIP
RPL9
LIAS
PDE6D
COPS7B
PRCC
RPS27A
CLHC1
UBAC1
NR1H3
ACP2
TAF12
REXO1
WDPCP
MDH1
TBL1X
NLK
TMEM262
GATB
TAOK3
SUDS3
ING4
CCP110
RNF213
ZNF570
ZNF569
MTOR
SUPT7L
SLC4A1AP
JOSD2
ASPDH
ZNF571
ZNF540
TATDN3
NSL1
ID3
TSNAXIP1
RANBP10
ZNF335
MRPS7
MIF4GD
GGA3
GPAA1
EXOSC4
MALL
KRT39
SP1
RBBP5
CCDC90B
FAM168A
ZNF513
SNX17
EIF2B4
ADGRA1
INTS9
HMBOX1
C19orf48
AHCYL2
SCRIB
PCBP1
RNASEH2A
PRDX2
ING3
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
PPRC1
TBL3
RPS2
RNF151
NOXO1
STX16
WDR53
FBXO45
WDR97
MAF1
CYC1
NEBL
AP2M1
TEPSIN
NDUFAF8
EXOC6B
TSC2
NTHL1
ZNF235
TNFRSF12A
THOC6
HCFC1R1
CLDN6
CACTIN
TSN
TOM1L2
DRC3
NOC4L
DDX51
FBH1
ANKRD16
SPAAR
HRCT1
LARS1
SIRT4
DYNC1I2
POLDIP3
H2BC4
H2AC6
OR4N2
POLR2E
GPX4
HNRNPL
STK36
RNF25
VARS2
GTF2H4
CAPN15
SLC35B4
SUPV3L1
RPS20
ZNF547
TRAPPC2B
COMMD1
CCT4
SOX6
C11orf58
INVS
ERP44
USP48
KDM6B
ZNF585B
ZNF383
SUFU
ACTR1A
RGS19
OPRL1
LKAAEAR1
ZFYVE19
DNAJC17
STAM2
NDC80
METTL4
UFD1
CDC45
TEKT2
ADPRS
FARSB
ZNF576
IRGQ
IPO13
ATP5MG
ASXL1
SLC39A1
CRTC2
CREB3L4
ISY1-RAB43
ISY1
SF3A3
FAM149B1
ECD
ZFYVE1
NDUFS3
KBTBD4
FAM180B
OAZ3
MRPL9
LYRM4
FARS2
GOSR1
BUB1B
RAB11B
UQCRC2
KATNB1
SYP
PRICKLE3
RPS3
PSMB2
PEX26
IER3
FLOT1
DPH6
ARID5B
HDGF
HDAC9
CALR3
C19orf44
OR4M1
H2BC15
H2AC15
EHF
GALM
TMEM208
LRRC29
TMEM70
ELOC
RPL32
PARP16
ID1
H3C4
TP53I3
SF3B6
FAM228B
HNRNPC
LRCH4
FBXO24
TSSC4
PRR14
FBRS
ORMDL3
GSDMB
SLC35B1
ZNF687
LSG1
GSK3A
ERF
RGPD2
RGPD1
ZNF165
OR1F12
NUDCD1
TXNDC5
ZNF17
CCDC146
GPR137
OR4Q3
TMEM107
TACO1
H4C5
H2BC7
H2AC7
PROSER3
LIN37
HSPB6
TRIP10
GPR108
GBA
BMP5
ZMYND10
SSR3
SPSB3
MRPS34
EME2
FRMPD4
G3BP1
BMF
STAM
TFPT
PRPF31
TIPARP
PIN4
STT3A
ARID2
SSBP1
SP5
ART1
UFSP2
SART3
ISCU
C4orf47
VCPIP1
C8orf44-SGK3
ZBTB38
SIRT2
NFKBIB
ZNF140
CYCS
SNX16
RPL36
MICOS13
HSD11B1L
STIP1
ARHGEF9
NUDT13
HEXIM2
AK2
SHC1
FLAD1
CKS1B
NUP107
RARB
PRR5L
CP
COMMD9
OLFML2A
NR6A1
ZNF608
TIMM21
MTRNR2L9
FBXO15
TMEM60
PHTF2
TM4SF18
COX16
KIF2C
CCDC174
WT1
UTP3
PSPN
ALKBH7
RXFP4
PTPN6
KHDC4
RGS14
LMAN2
WDR46
RGL2
PFDN6
RPIA
ZNF417
SPHK2
RPL18
FAM83E
CNIH4
MEIS1
KIAA0895L
EXOC3L1
ELMO3
E2F4
PANK4
HES5
MRPL53
MOGS
UBR2
ZC3H10
RPL41
ZNF444
TBL1XR1
TRDMT1
KRR1
BAHCC1
PIGL
NCOR1
ANAPC5
FAM187A
EFTUD2
CCDC103
SEC11C
RBM42
TRAF7
RAB26
NFIB
DOK3
DDX41
SNAP25
OST4
KHK
EMILIN1
KBTBD6
TRAPPC6B
PNN
TMTC3
CEP290
CAND1
GOSR2
NMT1
DCAKD
SMG8
METTL3
TULP2
PSENEN
NUCB1
EIF3F
SRSF11
LRRC40
INTS1
NDUFS7
MED27
NME1-NME2
NME1
ZBTB45
SLC27A5
SLX4IP
MKKS
TTI2
PWWP2A
TXNDC2
ZSWIM3
ACOT8
RNF121
LOC100133315
NPAS4
DCAF7
UTP11
UBE2I
FHL3
CDK5RAP2
EIF2AK3
ANKRD28
PCM1
ZFPL1
CDCA5
SAMD1
MISP3
C19orf67
COX7C
ZNF48
VMO1
TBC1D10B
RPL27
PSMB6
MYLPF
IFI35
GLTPD2
ATP6V1G1
EMILIN2
TCERG1
MTRNR2L10
GTPBP6
BAZ2A
ATP5F1B
SSBP3
SMAD3
ZMAT2
HARS2
HARS1
H4C8
GTF3C3
C2orf66
BCL3
VWA5A
PHB2
BCL2L1
SLC25A20
HMX2
BUB3
TINF2
NEDD8-MDP1
NEDD8
GMPR2
GET3
PTPRH
KRT19
KRT15
CLN3
APOBR
RPS6KB2
PTPRCAP
EXOSC5
BCKDHA
PHF19
ZNF337
SUGP1
MAU2
C12orf43
MRPL28
ARL4C
SEL1L
PPP5D1
CALM3
USP17L22
USP17L21
USP17L20
USP17L12
USHBP1
NPIPA1
BABAM1
RPL35A
IQCG
HNRNPUL1
FNDC3A
ZNF384
SHPK
CTNS
NDUFAF5
ESF1
NDUFB5
MRPL47
CDCA8
C1orf109
CTDP1
ZNF691
MITD1
C5orf38
RHOT2
RHBDL1
KMT2B
ZNF500
EMP3
CTU1
ZNF776
EXOC4
RBL1
ZNF605
EXD2
SMARCAL1
PPP1R12C
CD79A
ARHGEF1
PPP6R1
SRD5A1
EMC4
TRIP4
PCLAF
RPL18A
KRT23
MRPS23
SEC13
COPS7A
TRMO
GSTO2
WNK4
VPS25
TOP2A
SMARCD2
SELENOH
PABPN1
DLGAP1
PLA2G4A
DHX8
RPAIN
NUP88
ZAR1
CD2BP2
IRAG1
PEAK1
NOP16
HMG20A
HIGD2A
SSBP2
MRPS18C
HELQ
TMEM160
SNX1
CIAO2A
ESYT1
VEZT
IARS2
FGD6
BPNT1
RPL37
EPS15
CARD6
CRADD
UBE2J1
FBXW11
INO80C
HEATR5B
GPATCH11
SRCIN1
TARBP1
CCNL1
ZNF211
SYT7
SLC39A9
MTMR9
ERH
SLC25A19
TLE3
GLIPR1L1
CAPS2
USP30
PRORP
PPP2R3C
RCAN1
PTEN
KLLN
CCL3
UVRAG
MARS1
ARHGAP9
TMEM109
PRPF19
PLA2G15
H4C4
H2BC6
DMAC1
AP1G1
NDUFB3
MTRF1
INTS10
FAM126B
ZCCHC4
ARHGAP17
MYOM2
MT2A
TPRKB
SH3RF2
WFIKKN1
METTL26
GTF2I
FCRL5
LTN1
CSDE1
TM9SF4
STK25
GABPB2
DYNC2I2
RABAC1
ANGPTL2
ZNF688
USP22
ZC3H12A
XAB2
STXBP2
PCP2
SESN1
GUF1
CEP57L1
TOMM40L
ASAH2
APOA2
ARHGEF2
TBP
PSMB1
MATR3
ZNF420
BRWD1
ZCCHC8
TRAPPC9
VARS1
VRK1
KLHL29
PSMC5
FTSJ3
FCF1
AREL1
DENND1B
TOR1AIP2
TOR1AIP1
GORAB
PLEKHM3
SF3B3
COG4
B4GALT3
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
SNAPC1
RAD52
LTA4H
HSPA9
CWC27
BMERB1
HEMK1
C3orf18
ZNF628
NAT14
STAT1
SYNGR4
PPP1R2
ID2
CORO1A
API5
ZSCAN5A
RPL21
NFATC2IP
EIF4A1
CD68
ABT1
TJP3
SF3B5
NVL
ZC3H6
SIX1
ZNF286A
RBM28
TBC1D17
PNKP
ATF4
AKT1S1
RMDN2
CCDC138
CCL3L3
CCL3L1
RPGRIP1L
FTO
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
HMOX1
CGGBP1
ZMYND8
TRIM55
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
ZSCAN32
ZNF174
XPNPEP3
ST13
PDE4DIP
GCLC
DNAJB7
CCDC110
FAM177B
ZNF548
LNPEP
ATP2C1
ZKSCAN8
ZBTB5
PEX3
ADAT2
KLF6
DBP
CA11
TXNDC11
TMEM256
PLSCR3
NLGN2
CHPF2
ABCF2
CENPA
HBP1
RPL14
THRA
PTDSS2
MED24
ANO9
FUT10
CYTH3
SCT
DRD4
CDHR5
CCDC59
TMEM63C
RAB5C
NLRP3
RAP2B
PRDM15
CCL5
TXNL4B
TIMMDC1
DHX38
ALG10B
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MYEOV
MPV17L2
HCAR3
TSPO
MCAT
GUCY2D
DPP9
CNOT1
CCDC39
ADO
DAGLB
TPGS1
CBWD2
ZNF56
TOM1
RTRAF
RTF2
KCTD5
MDM4
IL17A
NPR1
ILF2
GLDN
CCM2
UBE2H
RASAL2
NCOA7
KANSL3
FER1L5
BDH1
TJP1
RUFY3
CRYBB1
VPS52
RPS18
B3GALT4
C1orf198
TTC33
TRMT10C
THAP11
TGIF1
IFNGR2
COX7A2L
TRAPPC3
MAP7D1
ZPBP2
ZNF124
USP3
RGS8
IKZF3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
CSNK1G3
WHAMM
HEXA
FSD2
CHST12
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
RIIAD1
NUP153
MED23
MAP2K3
IRF2BPL
ENPP3
CELF3
NGB
NAT16
FETUB
SLC33A1
CMSS1
BIN2
PARP2
CCNB1IP1