ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
FRG2C
KIF5C
ADAMTSL1
CABCOCO1
MTRNR2L8
SPATC1L
COL23A1
TNFRSF19
MAMDC2
SP2
FAP
FRG2
NAV3
EMCN
DDX23
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
DPH6
KATNB1
EVI5L
CLPB
BOD1
SLC8A1
TMEM242
VPS50
HEPACAM2
UNK
H3-3B
DNM2
H4C12
H4C11
H2BC14
H2AC14
TMEM115
NPRL2
CYB561D2
CALCOCO1
H4C3
H1-6
DDX49
COPE
CCDC200
CHMP4B
POLR3F
DZANK1
SP1
TCEA2
FEM1A
NAA80
IFRD2
HYAL3
PHRF1
RWDD1
TBL1X
EHF
PHF12
H2BC4
H2AC6
FBXL19
LOC102724770
DGCR6
ARHGAP35
AP2S1
TSN
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RBBP5
ARID5B
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
IRF2BP2
MAPKAPK5
OR4M1
KHSRP
GALM
PHB
CIC
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
IL32
WDPCP
MDH1
THRAP3
TSNAXIP1
RANBP10
MRPL24
HDGF
FAM168A
BANP
PEX14
DFFA
PRCC
TESK2
MMACHC
CCDC163
RPS20
PPRC1
PAFAH2
ARID2
RFX1
ID3
YJU2
TEPSIN
NDUFAF8
S1PR4
NCLN
CALR3
C19orf44
NUDCD1
SUCLG1
NEBL
HIKESHI
ST3GAL2
ZFYVE1
CCDC90B
ART1
TOM1L2
DRC3
PAK1IP1
C6orf52
TSC2
NTHL1
ADAMTS9
EAPP
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
GSDMB
SLC25A25
NAIF1
TMEM208
LRRC29
RAB5B
PMEL
CDK2
OR4Q3
BMF
PANK4
HES5
LRCH4
FBXO24
SPSB3
MRPS34
EME2
INVS
ERP44
UBE2T
PPP1R12B
GSPT1
NPIPA1
SMPD3
ZNF17
CCDC146
COX16
UCKL1
RAG2
IFTAP
PRR5L
COMMD9
VIPAS39
AHSA1
TAF12
HNRNPC
NDC80
METTL4
RPS3
SNX16
ZNF417
PEMT
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PIGL
NCOR1
SPAAR
HRCT1
PES1
H2BC15
H2AC15
ID1
ING4
SP5
UNKL
C16orf91
PRR14
FBRS
MTOR
PNKD
GPBAR1
AAMP
GBA
STIP1
BUB1B
NUP107
PIN4
GATB
OST4
KHK
EMILIN1
INTS1
GPR137
ZNF268
NOP16
HIGD2A
BMP5
ZNF608
WT1
RXFP4
KHDC4
CNIH4
SRSF11
LRRC40
ZNF513
SNX17
EIF2B4
TP53I3
SF3B6
FAM228B
TMEM262
ZFPL1
CDCA5
LY6L
TACO1
SYMPK
FOXA3
ZNF140
PARP16
DOK3
DDX41
MALL
MRI1
C19orf53
RARB
WDR74
STX5
LARS1
TMEM70
ELOC
SNAP25
CP
OSBP
RPS7
SF3A3
GSK3A
ERF
INTS9
HMBOX1
KIAA0895L
EXOC3L1
ELMO3
E2F4
MED27
TTI2
CCNL1
RPL32
CYCS
ZNF211
TFPT
PRPF31
DYNC1I2
TINF2
NEDD8-MDP1
NEDD8
GMPR2
SLC39A1
CRTC2
CREB3L4
NOC4L
DDX51
RCAN1
TBL1XR1
DMAC1
ZNF547
TRAPPC2B
TSSC4
MTRF1
ZCCHC4
SCAF1
RRAS
VARS2
GTF2H4
ZNF225
SSBP3
RABL2A
SEC11C
TMTC3
CEP290
ZSWIM3
ACOT8
ZNF687
COX7C
STK25
RANBP2
SPHK2
RPL18
FAM83E
ZC3H12A
NUDT13
NDUFB5
MRPL47
GUF1
TULP2
NUCB1
SMARCAL1
UBQLN4
LAMTOR2
ZNF165
OR1F12
STAM
CAND1
VMO1
PSMB6
GLTPD2
NDUFAF5
ESF1
TBP
PSMB1
KIF2C
WDR46
RGL2
PFDN6
HMX2
BUB3
H3C4
H4C5
H2BC7
H2AC7
TCERG1
ZCCHC8
VARS1
TMEM107
TRIP10
GPR108
MEIS1
SMG8
METTL3
ZMAT2
HARS2
HARS1
RPS6KB2
PTPRCAP
KMT2B
VRK1
FCF1
AREL1
NUP205
COMMD1
CCT4
OAZ3
MRPL9
KBTBD6
TOR1AIP2
TOR1AIP1
PNPLA6
OR4N2
TIMM21
FBXO15
SHPK
CTNS
PPP1R12C
EMC4
PLEKHM3
SLC35E2B
GTF3C3
C2orf66
HDAC9
PROSER3
LIN37
HSPB6
ANAPC5
PSENEN
BCL2L1
GSTO2
TNFRSF12A
THOC6
HCFC1R1
CLDN6
TRDMT1
PHB2
HEMK1
C3orf18
ZNF628
NAT14
SIRT4
ZMYND10
ZFYVE19
DNAJC17
VWA5A
C12orf43
MRPL28
RHOT2
RHBDL1
KRT39
ZSCAN22
KRT19
KRT15
ZNF605
TBL3
RPS2
RNF151
NOXO1
OLFML2A
NR6A1
ARL4C
NUF2
TM4SF18
MITD1
NDUFS3
KBTBD4
FAM180B
AK2
MRPL53
MOGS
ABT1
RPL36
MICOS13
HSD11B1L
UFD1
CDC45
NFIB
AHCYL2
SSBP2
ZNF286A
UBR2
CDK5RAP2
CTU1
WNK4
VPS25
RPL37
CARD6
POLDIP3
BAZ2A
ATP5F1B
ATP5MG
PSMD11
NFKBIL1
DDX39B
ATP6V1G2
ZNF585B
ZNF383
ZNF337
EIF4A3
HMOX1
PSPN
ALKBH7
SEL1L
ZSCAN32
ZNF174
HEXIM2
CCDC174
UBAC1
ATP6V1G1
FARSB
GOSR2
TATDN3
NSL1
PTPRH
PEX3
ADAT2
DBP
CA11
TMEM94
UFSP2
C4orf47
TXNDC2
CD79A
ARHGEF1
RPL14
PTDSS2
ANO9
AURKAIP1
LSG1
C1orf159
UTP11
FHL3
ZC3H10
RPL41
FAM187A
EFTUD2
CCDC103
CD2BP2
CRADD
RAB5C
FASTKD1
SUFU
ACTR1A
BAHCC1
NMT1
DCAKD
ZNF500
G3BP1
ZNF776
TIMMDC1
DCAF7
SEC13
TLE3
SIRT2
NFKBIB
ZNF444
CLN3
APOBR
SSR3
NLK
DSTYK
STT3A
SART3
ISCU
DLGAP1
KCTD5
PRRG2
NOSIP
VCPIP1
C8orf44-SGK3
STX16
BCL3
SLX4IP
MKKS
SELENOH
HEXB
NME1-NME2
NME1
SMARCD2
PDE6D
COPS7B
TMEM60
PHTF2
TRAPPC6B
PNN
SMAD3
EXD2
KRT23
TRMT10C
THAP11
COX7A2L
TRAPPC3
MAP7D1
ZNF124
TSNAX
ZNF48
TBC1D10B
MYLPF
USHBP1
BABAM1
MT2A
RPL18A
HEXA
ZNF143
RGS14
LMAN2
SAMD1
MISP3
C19orf67
FBXW11
CCAR2
C8orf58
LMNB2
SUPT7L
SLC4A1AP
SHC1
FLAD1
CKS1B
TRAF7
RAB26
API5
EMP3
EXOC4
TPGS1
VEZT
FGD6
MTMR9
SNX15
SUPV3L1
RPIA
H4C8
SUGP1
MAU2
COPS7A
SNX1
CIAO2A
ZNF235
CTDP1
LTN1
ZNF26
MRPL21
IGHMBP2
MRPL20
CCNL2
ZNF420
KRR1
ZNF384
THAP1
RBM25
SSBP1
RBM42
EIF3F
PWWP2A
RNF121
LOC100133315
TAOK3
SUDS3
TARBP1
TMX2
MED19
SCYL3
CDCA8
C1orf109
ZNF688
SLC35B1
SCRIB
SRD5A1
ZNF226
EIF2AK3
RPL27
IFI35
TPRKB
ZBTB45
SLC27A5
MARS1
ARHGAP9
TMEM63C
GET3
PABPN1
DHX8
DYNC2I2
USP48
TXNL4B
DHX38
CCDC59
PRR22
DUS3L
ING3
ZKSCAN8
RPL21
NTMT1
C9orf50
RGPD2
RGPD1
TXNDC5
TXNRD1
FRMPD4
TIPARP
CACTIN
ZBTB38
ARHGEF9
RNASEH2A
PRDX2
MTRNR2L9
VTI1B
UTP3
PTPN6
RAB11B
ZNF335
SEC61B
ALG2
POLR2E
GPX4
REXO1
ZNF576
IRGQ
ISY1-RAB43
ISY1
C19orf48
NDUFS7
NPAS4
UBE2I
HNRNPL
SYP
PRICKLE3
ANKRD28
PCM1
CCP110
EMILIN2
MTRNR2L10
GTPBP6
RPS27A
IPO13
CLHC1
SLC25A20
PCBP1
EXOSC5
BCKDHA
PHF19
MRPS7
MIF4GD
GGA3
PPP5D1
CALM3
USP17L22
USP17L21
USP17L20
USP17L12
RPL35A
JOSD2
IQCG
HNRNPUL1
FNDC3A
ASPDH
CAPN15
ZNF691
C5orf38
RPL9
LIAS
STK36
RNF25
RBL1
PPP6R1
TRIP4
PCLAF
MRPS23
TRMO
TOP2A
PLA2G4A
CLCN5
RPAIN
NUP88
ZAR1
IRAG1
PEAK1
HMG20A
LYRM4
FARS2
RGS19
OPRL1
LKAAEAR1
AP2M1
MRPS18C
HELQ
TMEM160
FBH1
ESYT1
IARS2
BPNT1
EPS15
STAM2
UBE2J1
INO80C
IER3
FLOT1
HEATR5B
GPATCH11
SRCIN1
SYT7
SLC39A9
ERH
SLC25A19
OR6B2
NDUFA10
GLIPR1L1
CAPS2
USP30
PRORP
PPP2R3C
PTEN
KLLN
CCL3
UVRAG
TMEM109
PRPF19
PLA2G15
H4C4
H2BC6
AP1G1
NDUFB3
INTS10
FAM126B
ARHGAP17
MYOM2
WDR97
SH3RF2
RNF213
MAF1
CYC1
WFIKKN1
METTL26
GTF2I
FCRL5
CSDE1
TM9SF4
GABPB2
RABAC1
ANGPTL2
USP22
XAB2
STXBP2
PCP2
SESN1
CEP57L1
TOMM40L
ASAH2
APOA2
ARHGEF2
MATR3
BRWD1
TRAPPC9
KLHL29
PSMC5
FTSJ3
DENND1B
GORAB
SF3B3
COG4
B4GALT3
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
SNAPC1
RAD52
LTA4H
HSPA9
CWC27
BMERB1
STAT1
NR1H3
ACP2
SYNGR4
PPP1R2
ID2
CORO1A
ZSCAN5A
NFATC2IP
EIF4A1
CD68
TJP3
SF3B5
NVL
ZC3H6
SIX1
RBM28
TBC1D17
PNKP
ATF4
AKT1S1
RMDN2
CCDC138
CCL3L3
CCL3L1
RPGRIP1L
FTO
MDM2
ENPP4
CLIC5
CGGBP1
ZMYND8
TRIM55
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
XPNPEP3
ST13
PDE4DIP
GCLC
DNAJB7
CCDC110
FAM177B
ZNF548
LNPEP
ATP2C1
ZBTB5
KLF6
TXNDC11
TMEM256
PLSCR3
NLGN2
CHPF2
ABCF2
CENPA
HBP1
THRA
MED24
TEKT2
ADPRS
FUT10
CYTH3
SCT
DRD4
CDHR5
NLRP3
RAP2B
PRDM15
CCL5
ASXL1
ALG10B
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MYEOV
MPV17L2
HCAR3
TSPO
MCAT
GUCY2D
DPP9
CNOT1
CCDC39
ADO
UQCRC2
DAGLB
CBWD2
PEX26
ZNF56
TOM1
RTRAF
RTF2
MDM4
IL17A
NPR1
ILF2
GLDN
CCM2
UBE2H
RASAL2
NCOA7
KANSL3
FER1L5
BDH1
TJP1
RUFY3
CRYBB1
VPS52
RPS18
B3GALT4
C1orf198
TTC33
TGIF1
IFNGR2
LOC100130520
KDM6B
CD300H
C17orf77
ZPBP2
USP3
RGS8
IKZF3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
CSNK1G3
WHAMM
FSD2
CHST12
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
RIIAD1
NUP153
MED23
MAP2K3
IRF2BPL
ENPP3
CELF3
NGB
NAT16
FETUB
SLC33A1
CMSS1
BIN2
PARP2
CCNB1IP1
BTRC
SNRPD3
LAMP1
GUCD1
EML2