ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003072 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◣ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

MTRNR2L8
PSG5
MTRNR2L2
MSH3
DHFR
ARHGAP5
RBL2
PSG9
PSG11
PSG1
PLA2G4D
HSD17B4
ADAM17
PSG3
PSG7
RNF43
EXOSC2
COL23A1
NIPSNAP1
RGPD2
RGPD1
PSG8
SLC5A10
TMEM52B
PSG4
MIS12
DERL2
CCDC141
PKIB
BCL2L13
ATP6V1E1
NR4A1
MTRNR2L1
KRTAP3-1
YTHDF1
LRP2
PPP1R14D
CDH1
ANKRD23
RABGGTB
GLG1
AP3D1
ZNF503
WWP1
KRTAP2-1
CRPPA
CCDC81
PACSIN2
RAB17
CLCN4
PSPN
WBP1L
SLC7A7
COLEC12
NAGLU
ITGAM
GSTO1
GEMIN2
SIX2
COMMD8
SLC10A6
PHLDB2
ZDHHC1
HECTD1
WDR93
PEX11A
ENPEP
ADGRG3
OR10V1
DNAJC15
C18orf21
GTPBP4
SLCO2A1
FRG2
USHBP1
BABAM1
SLBP
ANKRD40CL
DPEP2
FAM110A
FDFT1
LDLR
GTPBP6
IFNAR1
ENTPD1
CCNL1
BACE1
CLPSL1
KRAS
SFXN5
PATJ
UBE2J1
ANKRD1
MTDH
P2RX6
BCAR1
FAM151B
PLAAT5
DNAJB2
PIK3C2A
PKP2
FAM89A
FGD3
GRHL3
SLC18A1
MEST
RASA2
SH3YL1
ACP1
C1QTNF6
EFNA1
TTC23L
ARHGEF18
CHST6
LGR5
HAPLN1
TMEM245
LHX8
SLC6A9
EVPLL
LYRM1
DCUN1D3
HDAC5
ATP2B1
TMTC2
SLC15A2
BANK1
ACOT2
MTRNR2L9
DUX4
IGSF22
NSD3
RIPOR1
CCR5
TTLL7
SLC12A3
STARD8
RYK
ZNF474
SLC19A3
LIMS4
LIMS3
SYNPO
TRPM6
SEMA6A
FBL
KRT19
DEPP1
TMPPE
GLB1
CLYBL
PRKCZ
LSM14A
USP6NL
TRPM1
PTTG1IP
IKZF3
EPB41L3
SH3BP4
DECR2
SYBU
TMC1
TXNRD1
SLC7A6
IL1R1
CTPS1
ERP27
SLC25A13
NR4A3
GJA10
ZNF592
SMARCA2
KLF6
KDM5C
FGFRL1
NIBAN2
HSD17B1
LIMS1
PIWIL3
TMEM88B
ANKRD65
SAA1
PLAC8
GATA2
TAF6
CNPY4
IQGAP2
RARS1
PRKRIP1
ZBED1
DHRSX
INSL4
ABLIM1
EHF
CD164
SLC20A2
KRT8
IFNL4
TSPAN10
NPLOC4
CLDN10
GAS2L3
ZNF343
RBFOX2
WIPI1
ATG9B
ABCB8
GALNT11
ST8SIA6
ASPRV1
DLC1
SAMD7
SNAP23
SNX27
CDC14B
TMEM107
AMN1
DNAJC21
ACVR1
ITGB6
CTNNAL1
ZG16
TRIM22
G3BP2
EID2
TMEM254
PSG2
TMEM212
TMPRSS11F
FUT3
PXMP4
OLFML1
VIT
FHDC1
SLC44A1
C6orf132
CITED4
NTAN1
CROCC2
SETD4
LIFR
CLIC4
SEC22B
GABRR3
ZNF674
CD55
KLHL5
RHOH
MTUS1
AMOTL2
SH2D4A
MRPS23
LNX1
HMOX1
C1GALT1
TACC2
POLD4
SVOPL
ILF3
BAHCC1
KRT18
TACC1
TSTD1
KRT71
ZNF641
ASPSCR1
OSBPL8
CMC2
TMCC3
ARHGAP35
KEL
SCNN1A
LTBR
TNIP3
CCDC88C
OLR1
ORAI3
RFLNA
RNASE7
TTLL4
PGS1
BAZ1B
ACER2
CREB1
KLF7
DGKD
RTN4
SLC23A2
SALL4
ARHGEF10L
PTPN3
SCAMP4
ADAT3
AP5B1
SEH1L
SUPT7L
SLC4A1AP
CD2AP
CORO2A
KIT
EHHADH
CALHM4
ZFPM1
ZNRF3
ZNF749
RPS14
BNC1
GGCT
SOWAHC
SEPTIN10
CNNM3
DLG2
SLC45A4
TRMT9B
RALBP1
CBL
ANKRD2
GM2A
TNFAIP1
IFT20
HACD2
MED15
IBTK
MIGA1
LTA4H
DUSP21
KIFC3
C12orf66
CD177
LOC388282
ACOT1
RGL1
ARPC5
ING2
FRG2C
FRY
C6orf163
SIX1
TRIM17
H3-4
ARHGAP45
KRTAP4-2
KRTAP4-1
DEK
CXXC5
NKX2-3
OR5H14
RHEX
CDK3
TNF
LTB
AXL
LSMEM1
LOC389199
AFAP1
TLK1
PLEKHM2
TNRC18
PRDX3
ZNF398
BIN1
SPTLC2
RTN2
FAM83A
CDK19
AMD1
OSBP
TTR
TPGS1
CXCL2
RBM15
MORC4
SPHK1
ATP6AP2
TENM3
ID3
POU5F1
LHX4
HSPB3
ADGRG1
UBALD2
NEBL
CMTR2
IGFL4
CS
ZBTB12
EHMT2
C2
FAM107B
UIMC1
SLC25A26
EGFR
ZNF280D
RTL8C
CLPB
CAMK2G
MAGI1
GMFB
EFHB
TAS2R14
TSHB
SLC4A8
GALNT6
APBB1IP
STS
HOATZ
BTG4
PICALM
CABIN1
RABGAP1L
WDR91
TMCO6
CD14
TSKS
AP2A1
AMZ1
DAW1
HAVCR2
MYBBP1A
GGT6
ANXA4
AAK1
RHOB
MTR
KMT2E
CSF2RA
IGFL2
CNN2
WASHC3
APOBEC3B
JUN
KISS1
RASSF2
SLC25A34
CSGALNACT1
SLC29A1
TRPV2
SLC52A3
ZNF697
KTN1
SELENOT
AGAP3
BRD4
TTC8
ANKRD31
HCAR1
CRISP1
CTNND1
SIK3
NFIL3
THAP3
MRAS
CDCA4
KDM2B
PRSS22
RAPGEF1
STON1-GTF2A1L
RNF19A
ZBTB4
SLC35G6
POLR2A
ANGPT4
CCDC183
PTPN1
MGARP
MPP4
PLEC
KMT5C
HSPB7
CLCNKA
IL23R
PRSS8
EHBP1
CGN
ANXA3
KCNJ15
CALD1
XCR1
SPRED2
MYO10
PXMP2
POLE
AIG1
WWOX
TYW3
CRYZ
CXCR6
SH2D5
CALML5
ATP13A2
ZNF853
NAGK
ELF3
NFX1
C11orf16
FERMT1
FMN1
POLB
BCAP29
SPNS3
SASH1
C8orf58
HPDL
PTPRD
PHLDB3
ZNF83
RPF1
SLC6A4
MEF2D
C9orf131
UBE2D3
TIGD5
EEF1D
MEF2A
NCOA1
MRS2
AHCYL1
MYO18A
UROC1
RIPOR2
SULT2B1
SNAI1
MREG
ATMIN
ACER3
ULK2
PIAS4
AMHR2
AKAP13
KLF2
NEDD9
PNKD
MTMR11
LPP
NRK
NANOGNB
COL7A1
BRD3
DOT1L
ZNF367
NEURL3
SLC7A9
ALDH4A1
NDUFA4
PDCD1LG2
TNFSF8
ZNF57
CEP85
PDGFA
MBOAT2
SLC38A9
UNKL
FBRSL1
PPP2R3A
TPST2
HEXB
MID1
RIOK2
URGCP-MRPS24
URGCP
NIPSNAP2
ZNF358
TNFAIP8
ZMYND11
ADGRF3
SELENOI
RHPN2
GEMIN6
F2RL1
PRPH2
BBC3
VPS37C
LOC112694756
WDR74
SIRT4
ZNF407
BCAS4
CLTC
FOS
IL34
H2BC5
H1-4
GSTA4
BRIP1
TET1
MARVELD3
H1-2
ADGRF4
PFDN4
CXADR
BCAS1
POLG2
GREB1
NPAS4
TRA2B
FEM1B
POLR2J3
ADHFE1
SLC7A2
NPEPPS
FREM2
RGS22
PTPN6
C12orf57
SGK3
SRI
FGF1
MYO6
SLC1A5
PIP4P2
NBR1
MIDEAS
BMP7
FOXN4
BCAS3
PLD5
SLC17A5
PELO
ITGA1
TRIM37
ANKRD10
H3C15
H3C14
H2AC19
H2AC18
SPAM1
PSMD6
NCOA3
SCRIB
POLR2J2
APPBP2
IL22RA2
NPL
RHOV
H2BC4
H2AC6
ZMYND8
TFF1
PTPRE
FAM53B
NRAS
STX16
H2BC11
H2AC11
EPHB2
H2BC21
H2AC21
H2AC20
GHR
CAP2
OVOL2
FRYL
CSRNP2
MRPL38
TTC39C
FAP
H4C8
ST6GALNAC1
NRBP1
TEX14
MFSD4A
SULF2
NIT2
EXPH5
LRRC14B
EPS8
TGFB3
IFT43
CREM
IGSF5
DNMT3A
TMEM150A
PPARG
MS4A7
TMEM94
TFPI
PAK6
CD36
RHNO1
FOXM1
CYB5A
SYCE2
CCKBR
SMARCD2
EDARADD
PCCB
DNM1L
NAA60
NR1D2
NKIRAS1
RESF1
MTF1
GPD1L
TSPAN3
MRAP2
TPD52L1
ROPN1B
PLGRKT
CITED2
HEXIM1
PPY
CSPP1
ZNF552
SHROOM3
BANP
ALDH3B2
MARCHF7
MRTFB
CCDC59
SPAG9
GCM1
CHD2
ATXN7L1
KLRC3
YY1
SLC39A10
ELMO2
DUSP14
USP44
TMC5
SMIM6
PIK3R3
RBBP7
ERVW-1
SLC22A23
DCTD
CYP1B1
C1QBP
SULT1A4
SULT1A3
BOLA2
POLR1H
ZNF76
SPR
LACTBL1
TMEM185B
ARHGAP40
AIF1L
ACE2
WIPF1
CAPN5
ID2
OR2B11
IGF2BP3
SERPIND1
EPS15L1
TNFRSF12A
THOC6
SIRPA
HCFC1R1
DENND6A
NAALADL2
PLCXD3
SETD5
TTYH3
TCAF2
PORCN
FKBP4
JCAD
SIGLEC6
SEPTIN9
PPM1D
PLS3
TUBD1
RPS6KB1
CHRNA10
ZNF444
TNFAIP3
SDC4
ALOX5
PPFIBP2
CYRIB
TRIM45
BTBD3
PTGES
LIMA1
SLC39A1
GSK3B
CREB3L4
TMEM130
HMGCS1
MICB
IL1F10
NBN
HNRNPF
FOXJ3
C11orf94
PARP4
HERC4
ERGIC1
TPM1
INO80B
EGR1
SLC35A2
ID1
TLE3
LEPR
GGTLC3
FAR2
RNFT1
BAIAP2
SLC51A
HEATR6
PRPS1
ENSA
USP32
FBXL3
RDX
RB1
PTS
ARID5B
ZC3H10
RPL41
HES1
ARHGAP8
TREML1
ATR
HOXC12
HK1
CSF1R
PARP8
PAPPA
MCAM
CSH2
VPS26C
KAT2B
YJU2
HSF5
H2AX
GRM4
USP3
MACC1
DIAPH3
SVOP
ANK3
EDNRB
LOC102724265
BCR
TOMM34
RHOBTB2
GMNN
SPAAR
KLRC2
H2BW1
RIOX1
PEX3
OARD1
NFYA
C16orf46
ADAT2
TPD52L2
RAB31
PAPOLA
FBXO43
CDK7
APOL4
ABHD16B
KANK1
ARID4A
ANXA6
PLXND1
CDS1
H1-6
KIAA1586
GSTP1
FAM118A
TFDP2
TNRC6A
H1-3
KL
MAP3K8
TMEM205
RAB3D
OPRL1
LKAAEAR1
GOLGA8B
CCDC159
SLC2A3
IL36G
FBXO34
SLC12A6
S100A16
HID1
GPR82
H2BC15
H2AC15
PTPN14
NFYB
CANT1
RHOBTB1
GNLY
TRIM16L
TIAM2
PRAG1
PIK3C2G
NLRP7
BATF
DGKZ
NUP153
METTL27
CFAP92
PDIK1L
ATG14
MAZ
HSPA4
TPRN
SOX7
SLC9A8
PGC
PRSS41
GNG10
RUVBL1
PLEKHG2
EIF2D
ABCA4
TBC1D12
GRAMD1B
C1orf74
PGAP1
ZBTB7C
SYTL5
RGS8
DNASE1L3
HTR5A
H4C5
ANKRD33B
USP43
CYBRD1
CRYAA2
CRYAA
OR8S1
LATS1
SCAMP2
ITGAL
SZT2
MED8
SEPSECS
LIMK2
KBTBD6
JADE1
HSPB2
CRYAB
BOLA2-SMG1P6
AKTIP
SPTSSA
NXNL2
DHX40
CYS1
ZNF331
SMYD3
CLDN4
TOP1MT
RNF111
PSG6
NAA38
EMC2
CYB5R1
BRI3
TUSC1
FURIN
SREK1
LGALS8
ADAP1
TRMT12
MPO
TMEM30A
RIMKLB
PPEF1
IGFL1
GPR171
B4GALT1
USP36
PRKAG2
VNN2
SPAST
DCAF4
SPECC1L
SLC11A2
NAPEPLD
YPEL5
NSFL1C
ISM2
H2AC16
H1-5
EPO
DENR
ZNF335
LRPPRC
RARA
MAMDC2
DTWD2
H3C13
H2BC18
FBXW11
SPINK4
LIMS2
IRAK2
DNASE1
CATSPERG
TOGARAM2