ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003071 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◣ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

PSG5
RBL2
PLA2G4D
ARHGAP5
PSG9
PSG1
PSG11
MTRNR2L8
SLC5A10
FRY
PSG7
CRPPA
AP3D1
RAB17
ITGAM
HSD17B4
PIWIL3
PSG8
MTRNR2L2
MSH3
DHFR
CCDC141
MTDH
NIPSNAP1
GLG1
PSG3
PPP1R14D
ADAM17
WWP1
ENTPD1
ZDHHC1
ANKRD23
C18orf21
RNF43
PSG4
IFNAR1
TMTC2
LRP2
FAM110A
PATJ
EXOSC2
ADGRG3
TMEM52B
EHF
YTHDF1
GSTO1
DPEP2
LNX1
BCL2L13
ATP6V1E1
CDH1
AMN1
PSPN
COLEC12
ATP2B1
KRTAP2-1
SLC10A6
PXMP4
ENPEP
ANKRD40CL
GTPBP4
PHLDB2
MIS12
DERL2
NAGLU
RABGGTB
RYK
GEMIN2
WDR93
PEX11A
EID2
TET1
RASA2
ZBED1
DHRSX
SLC7A6
ABLIM1
SLC7A9
SEMA6A
CCDC81
IL34
NTAN1
CDK19
AMD1
ZNF474
ANKRD1
ACER3
LIMS4
LIMS3
DNAJC15
COMMD8
LIMS1
SH3YL1
ACP1
SLCO2A1
UBE2J1
SH2D4A
ZNF749
SFXN5
KIT
COL23A1
BACE1
KRTAP3-1
PKIB
OLFML1
POU5F1
MARVELD3
NKX2-3
MEST
RARS1
HECTD1
ID3
PRKCZ
PSG2
DNAJC21
ZNF407
TSPAN10
NPLOC4
SLBP
DECR2
FGD3
SLC19A3
EFNA1
RGL1
ARPC5
SLC18A1
PTPN1
TTC23L
FDFT1
MGARP
GABRR3
SYBU
FEM1B
PRKRIP1
SH3BP4
OR10V1
SLC15A2
GCM1
ZNF641
NSD3
NIBAN2
OSBP
SLC7A7
GSTA4
CTPS1
PLAC8
CXADR
CITED4
ATP13A2
C6orf163
MED15
CCR5
ARHGEF10L
IGSF22
OLR1
ARHGEF18
RALBP1
C1QTNF6
DUSP21
INSL4
SLC20A2
STARD8
HACD2
LDLR
IKZF3
ZNF343
EPHB2
USP6NL
TAF6
CNPY4
DLG2
MRPL38
LYRM1
DCUN1D3
TMEM245
P2RX6
ZNF398
C6orf132
RGPD2
RGPD1
IBTK
PELO
ITGA1
HMOX1
ADHFE1
PTTG1IP
TMEM88B
ANKRD65
HERC4
HPDL
ZNF592
FBL
SPAM1
FAM89A
ULK2
STS
KLHL5
PKP2
SETD4
RBM15
TPST2
TSHB
ACVR1
SEH1L
ZNF367
TRMT9B
CXCL2
PPY
BIN1
FAP
LRRC14B
SLC38A9
KEL
SIX1
SNAP23
CTNND1
KRT71
UIMC1
OVOL2
PGS1
LOC389199
AFAP1
VPS37C
TMEM150A
CYB5A
PLD5
LHX4
CDCA4
IL1R1
LSM14A
DGKD
FBRSL1
ANXA3
TTC39C
CMTR2
RNASE7
SLC17A5
RBFOX2
POLD4
TMPPE
GLB1
NUP153
CHST6
CALML5
PIP4P2
GHR
SEC22B
SLC1A5
ANKRD2
IQGAP2
SLC44A1
SAA1
KDM5C
BNC1
CROCC2
SNX27
ST8SIA6
HOATZ
BTG4
LIFR
PLAAT5
SLC25A34
ST6GALNAC1
VIT
ZNF853
PSG6
TXNRD1
ADAP1
SLC25A13
AIF1L
RTN4
LSMEM1
SYNPO
MTF1
ZNF444
CTNNAL1
RHPN2
PRSS8
KRAS
NR1D2
NKIRAS1
PIK3C2A
ACER2
MAMDC2
NBR1
SAMD7
C1QBP
WIPF1
SIX2
CD55
SUPT7L
SLC4A1AP
DNASE1
NANOGNB
ASPSCR1
KLRC3
CYRIB
RAPGEF1
CLMP
RIPOR2
CCKBR
MYO6
BRD4
ERP27
TLK1
RFLNA
CAMK2G
MARCHF7
DAW1
TACC2
FRYL
LACTBL1
FREM2
DCTD
ARHGAP35
RASSF2
GTPBP6
FUT3
FMN1
SIRPA
FAM53B
ACE2
YY1
TRPM6
PAK6
TSTD1
DEPP1
IL22RA2
MRAP2
NCOA1
ZNF358
DNM1L
MIGA1
SVOPL
ARHGAP40
HEATR4
SLC12A3
ANKRD10
DNMT3A
DPRX
NIT2
GMFB
TRIM17
H3-4
TMCC3
SPR
CHRNA10
LTA4H
KRT19
ASPRV1
GGCT
OR2B11
CSF1R
BAZ1B
KIFC3
AIG1
DOT1L
USHBP1
BABAM1
ATR
CBL
RBBP7
CMC2
CXCR6
EPOP
SPTLC2
NDST1
FRG2
C1GALT1
ZG16
TTC8
JAM3
SRI
HNRNPF
ABLIM3
SIK3
NAGK
TNFAIP3
PLEKHM2
GRM4
RPL26L1
PLXNB2
LGR5
PORCN
EVPLL
TNFAIP8
HMGCS1
CLTC
TTYH3
PARP8
EMC2
SPNS3
ZNF552
CAPN5
ZFPM1
TACC1
CLCN4
FGF1
PAPPA
STXBP6
KRT8
NRBP1
NPL
TENM3
USP11
CUL2
TTR
FBXO42
ITGB6
CORO2A
ATXN7L1
USP44
SLC35A2
SESTD1
NEK6
TRIM22
FAR2
KAT2B
NR4A1
SEPTIN9
PEX3
ADAT2
CDC14B
MIDEAS
ORAI3
MRPS23
BANK1
NEDD9
RABGAP1L
TRIM45
MCAM
CSH2
SYDE2
RIPOR1
CXXC5
SLC6A9
TALDO1
MYLK3
CLDN10
OSBPL8
EPS15L1
SIGLEC6
G3BP2
ADGRF4
RHOV
PPARG
CYP1B1
RTKN
TMEM212
BCR
SLC45A4
PACSIN2
MREG
GM2A
CNNM3
NFIL3
LDAH
ZNF503
TMEM254
CALD1
EPS8
CD2AP
SLC25A26
CITED2
FHDC1
HAPLN1
MAGI1
MBOAT2
ERGIC1
TMEM107
CCNL1
EIF3D
TRPM1
ZNF76
HK1
KIAA1586
GPD1L
CDK7
HSPB2
CRYAB
HSD17B1
MRS2
CSRNP2
PCCB
SLC39A10
TMEM185B
CFAP92
OR8S1
LEPR
ANKRD33B
CLYBL
MYBBP1A
GGT6
LOC388282
KTN1
TNRC6A
MTUS1
ANXA6
LHX8
PARP4
BAIAP2
MYO18A
CREB1
PTGES
MICB
SLC2A3
MTRNR2L1
TFPI
ALOX5
ARID5B
ATP6AP2
PRORP
PPP2R3C
PDGFB
APBB1IP
C11orf94
USP43
ADGRG1
SPAG9
UGCG
OGDH
DEK
PTPN3
GNG10
EHHADH
MPP4
GRHL3
ATMIN
CSPP1
PRPH2
SEPSECS
SCARA3
ITPRIP
ADRB3
CELA1
CSGALNACT1
EXPH5
APOBEC3B
ZNF697
MTRNR2L9
MRTFB
ELMO2
IGF2BP3
DTWD2
IGFL4
SLC52A3
KMT5C
RDX
HSF5
DNASE1L3
GALNT11
NFYB
TPRN
AKTIP
ATG9B
ABCB8
BRIP1
GJA10
TGFB3
IFT43
TMC1
MS4A7
AFF1
STON1-GTF2A1L
PLGRKT
COMMD1
OTUD4
PLCXD3
TRIM16L
TBC1D12
ZNF335
ZMIZ2
SLC12A8
CLPB
HSPB3
CLIC4
ISM2
ADGRF3
CD177
KMT2E
BCAR1
KRTAP4-2
KRTAP4-1
CYBRD1
RRM2
SLC9A8
ZNRF3
PHLDB3
IL1F10
APOL4
SLFN12
TFDP2
LATS1
DUX4
H1-6
GOLGA8B
KBTBD6
SPTSSA
AMOTL2
DENND6A
HID1
SOX7
IFNL4
ZDHHC5
TMEM211
SPINK8
CREM
BLCAP
FERMT1
RB1
DIAPH3
FBXO34
OPHN1
CPEB3
BCAM
ARHGAP8
MKRN2OS
MYO10
WIPI1
RHEX
PDIK1L
SLC23A2
TMPRSS11F
ILF3
CYS1
PNPLA8
FOS
HEXB
SLC39A1
CREB3L4
ANK3
C12orf66
CDS1
SMIM19
SCNN1A
LTBR
BTBD3
SZT2
MED8
LIMS2
CATSPERG
LDB1
TTLL7
TMC5
PLS3
SYTL5
SQLE
PTPRE
ANKRD31
DUSP14
PRPS1
TREML1
SLC12A6
SETD3
ARHGDIB
METTL27
TMEM30A
WFS1
CANT1
NAA38
CHD3
OR5H14
EDNRB
RIOX1
IL36G
BAHCC1
ARHGAP45
SLC29A1
PICALM
ANXA4
KANK1
SERPINB7
SERPINB2
OSGIN2
STYXL1
FOXK2
HCAR1
RNF111
YPEL5
UBXN2B
MPZL1
TIGD2
AMZ1
SHROOM3
SERPIND1
DCAF4
WT1
TLE1
CCDC59
EHBP1
NSFL1C
PRPF38B
TLN1
CREB3
CDK3
ROR2
WBP1L
C9orf131
TOMM34
TIAM2
STARD13
PCYT2
GART
CS
SCAMP4
ADAT3
NRK
HEATR6
THAP3
BATF
RABEP1
KCTD7
SH3KBP1
RECK
CHRM5
CFLAR
RHOH
FAM118A
ZBTB7C
JUN
CFB
PADI1
PUDP
MTARC1
H2BW1
GRAMD1B
SCAMP2
SEPTIN3
STYXL2
GPA33
LYRM9
PTP4A2
MMP2
CAP2
SULF2
JCAD
LZTS3
PLAA
IFT74
TMEM44
UBE2C
LATS2
RNF19A
MSANTD3-TMEFF1
ARHGEF3
RPS14
IGSF5
SELENOI
AAK1
RBM45
PDE11A
DCSTAMP
GAS2L3
CLPSL1
ZNF83
NXNL2
BRI3
BEST3
HOXC12
IGFL1
SPECC1L
TEX101
C16orf46
PTPN14
WDR87
SIPA1L3
ATP1A1
CYP19A1
HOMER1
ICA1L
GLDN
DDX41
PTPRD
MAFG
FHL2
LMO7
CD164
RESF1
TMEM130
S100A16
SMAD5
ZNF799
TBC1D13
EIF4E3
RHNO1
FOXM1
URB2
TAF5L
NOCT
CALR3
C19orf44
ZMYND11
RIMKLB
ITGB3
SOCS2
TLE3
RANBP2
MEF2A
SULT1A4
SULT1A3
BOLA2
FAM151B
RAB31
NLRP7
BOLA2-SMG1P6
IRAK2
PTN
MARK2
SH2D5
GPR82
KYAT1
SDC4
LIMA1
PPP1R9A
MID1
NEURL3
KL
TOP1MT
SLC11A2
HTRA4
PLXNB1
CKB
RHOD
BCOR
GPC4
EGFR
SLC4A8
GALNT6
PLXND1
CCL28
POGLUT2
CNPY3
BIVM
CMYA5
ANAPC7
RHOB
ZP3
XCR1
JADE1
TUSC1
SCNN1B
NEURL1
MIDN
LAMA5
HNRNPR
ZC3H7A
STK33
LHB
CDHR3
KRT18
AGAP3
SIGLEC15
ADIPOR1
PLS1
MED13L
STATH
FOCAD
SF3B4
WWOX
GGTLC3
GEMIN6
CFAP410
CD59
RAB11FIP4
FZR1
TFCP2
PODXL
FSCN1
CYSLTR2
CSF2RA
ALDH4A1
MOG
LYPLA1
RTL8C
NEDD4L
ZBTB12
EHMT2
C2
LOC102724265
PLA2G2E
PDK1
SPX
PALM3
CCDC88B
MAP1LC3B
FBXO31
DTD2
STK11IP
SAP130
CDHR2
SPOP
HSPA9
MIIP
FOXC1
UPF2
IMPDH1
ZNF836
USP39
OSBPL11
C2orf68
SMARCA2
RTN2
SULT2B1
WEE1
PPM1N
C11orf95
TRA2B
CALHM4
TNF
LTB
RGS8
GPR171
SPINK4
MIOS
SPHK1
INO80B
KLRC2
SPRED2
CYB5R1
NHSL1
LARP1
DENND1A
HSPB1
FAM83A
ASAP1
TNK2
PHACTR2
TUSC3
C1orf105
B4GALT5
ZNF674
LRPPRC
ADAM22
LDLRAD1
TSEN2
TINAGL1
PPM1H
MRPS24
CCDC177
UXS1
MPP1
DIO1
ITGAL
OR4C3
CCNI2
ALDH3B2
ZNF451
SLC3A1
CCNG2
LMBRD1
HLCS
SALL4
TTLL4
ZBED9
EIF3C
EEA1
FBXL3
HSPB7
CLCNKA
TSKS
AP2A1
COL7A1
USP36
POGK
ZXDC
PTGR1
ELF3
FUT8
RUVBL2
GYS1
HAVCR2
PTS
SOWAHC
SEPTIN10
F2RL1
RAP1B
HSFX3
EFR3B
SPAST
SCHIP1
VTCN1
SLC49A4
HSPBAP1
EEF1AKMT1
CEP78
TCAF2
MPO
TJP2
PTEN
KLLN
NAALADL2
PDCD1LG2
MTR
TBC1D22A
WDR83OS
WDR83
TMEM40
NWD1
MAN2B1
SPATA9