ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003070 | Trophoblast stem cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◣ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

PSG5
RBL2
WWP1
GLG1
EXOSC2
PLA2G4D
PSG9
SLC5A10
PSG1
YTHDF1
ARHGAP5
RNF43
ZDHHC1
NIPSNAP1
LYRM1
DCUN1D3
DPEP2
TMEM52B
AP3D1
ATP2B1
PSG11
KRTAP2-1
BCL2L13
ATP6V1E1
RYK
LRP2
SLCO2A1
FAM110A
IFNAR1
PSG3
RABGGTB
PSG7
ADAM17
TMEM212
PSG8
OSBP
CCDC141
BACE1
ANKRD23
TRMT9B
NAGLU
SEMA6A
PPP1R14D
TRPM6
ITGAM
ANKRD40CL
MTDH
CDK19
AMD1
PSG4
RAB17
PATJ
RARS1
SLC10A6
RASA2
DNAJC15
WDR93
PEX11A
ANKRD1
SLC7A6
MEST
HSD17B4
FAM89A
GTPBP4
ABLIM1
SH3BP4
ENPEP
RHOH
SEC22B
SLC19A3
PIWIL3
AMN1
TMEM88B
ANKRD65
GSTO1
ZNF407
DLG2
SYBU
IGSF22
TMTC2
GEMIN2
CDH1
LHX8
SLBP
KRT71
COMMD8
PTTG1IP
OLFML1
PKIB
TSPAN10
NPLOC4
PSPN
SFXN5
CROCC2
LIMS1
LGR5
COLEC12
FDFT1
EFNA1
ZNF592
CXCL2
TAF6
CNPY4
PHLDB2
KRTAP3-1
ACVR1
C18orf21
LIMS4
LIMS3
PRKCZ
PGS1
SAA1
ZNF343
HMOX1
RPS14
TMEM245
BAZ1B
PACSIN2
SIX1
ADGRG3
KMT2E
CRPPA
MRPS23
NBR1
TMPPE
GLB1
ARHGEF18
TTLL7
PXMP4
VPS37C
RBM15
KLHL5
MPP4
ENTPD1
IL1R1
DLC1
CCDC81
OR10V1
USHBP1
BABAM1
SH2D4A
ZNF503
ANKRD10
NPL
SAMD7
C1QTNF6
CCR5
VIT
SLC1A5
HECTD1
MGARP
CTPS1
UBE2J1
PIP4P2
MIGA1
SLC23A2
CXADR
MARVELD3
RHNO1
FOXM1
ADHFE1
FGFRL1
SLC18A1
NTAN1
IL34
C1GALT1
PLAAT5
ZNF749
FGD3
LTA4H
TRIM17
H3-4
SETD4
SLC6A9
ITGB6
RASSF2
RESF1
TRPM1
SH3YL1
ACP1
SLC15A2
SLC44A1
IKZF3
TYW3
CRYZ
CBL
SLC22A23
CLCN4
SCNN1A
LTBR
EID2
EXPH5
C6orf163
CMTR2
SLC17A5
NIBAN2
RIPOR1
PSG2
ZBED1
DHRSX
ASPSCR1
PLD5
RBFOX2
MIS12
DERL2
IGFL4
BCAR1
USP6NL
OLR1
ZNF367
LIFR
FGF1
HACD2
CALML5
SHROOM3
TTC23L
SLC7A7
GALNT11
IFNL4
GAS2L3
RTN4
RALBP1
ATP13A2
DGKD
SPTLC2
ZNF641
NKX2-3
BIN1
MREG
HAVCR2
NR4A1
TFPI
HSPB3
INSL4
ACER3
PPFIBP2
TACC1
ZNF358
PRAG1
TSHB
FHDC1
ANKRD31
SLC20A2
NRBP1
FEM1B
HCAR1
LSM14A
GJA10
TNIP3
ZNF853
ORAI3
IQGAP2
MYO6
PLGRKT
STS
TACC2
BRIP1
SLC12A3
ACER2
TTLL4
SIX2
PKP2
HPDL
PPARG
WBP1L
KRAS
PCCB
FBL
EVPLL
KRT8
PTPN1
KRT19
NANOGNB
TMC5
LDLR
TET1
ZNF474
POU5F1
CSPP1
PIK3C2A
TMEM254
FRYL
CMC2
MAP3K8
EHF
SLC38A9
EGFR
MRTFB
SLC25A34
CCNL1
TSTD1
KIT
INO80B
C6orf132
PELO
ITGA1
PTS
SLC25A26
FBXL3
RHOBTB1
CHST6
PRKRIP1
FERMT1
ENPP1
SNAP23
SMARCA2
JCAD
NIT2
SPAG9
SIK3
SYNPO
CITED2
SVOP
C1orf74
FREM2
CALD1
ELMO2
IBTK
ATMIN
GGTLC3
SPAM1
TMEM107
STARD8
CREB1
SLC4A8
GALNT6
PGAP1
TMEM130
ARHGEF10L
DEK
GNLY
OR5H14
CTNNAL1
RAPGEF1
ID3
ATG9B
ABCB8
NEDD9
B4GALT1
FUT3
TNFAIP8
MID1
RHPN2
STON1-GTF2A1L
SLC39A10
HSD17B1
MFF
SLC45A4
ELF3
DECR2
HAPLN1
SVOPL
TMPRSS11F
DNMT3A
PGC
HOATZ
BTG4
TTR
MBOAT2
TNF
LTB
DENND6A
SNX27
PLS3
CLTC
TENM3
CD55
CLDN10
TLK1
LOC102724265
BANK1
ASPRV1
HDAC5
SUPT7L
SLC4A1AP
ZNF398
PTPRE
MED15
SCRN2
P2RX6
HEXB
BTBD3
BRD4
LIMK2
PLAC8
RHEX
EPS8
PAK6
WDR91
PLCXD3
HOXC12
GHR
ST6GALNAC1
IGF2BP3
LNX1
ADGRF3
ERP27
DAW1
SLC52A3
SLC39A1
CREB3L4
LOC389199
AFAP1
ABCA4
EHHADH
ZNF552
SLC7A9
ZG16
GGCT
VNN2
FOS
CTNND1
TTC8
PLXND1
ADAM23
ATXN7L1
RFLNA
RHOV
GM2A
TMEM185B
MBNL3
PTPRD
RAB31
ANXA3
DNM1L
GABRR3
GSK3B
TAS2R60
RABGAP1L
CD164
OSBPL9
CCR7
MIDEAS
UIMC1
CSRNP2
CCDC88C
IL1F10
PRPS1
C16orf46
TXNRD1
PLEC
TGFB3
IFT43
USP44
TOGARAM2
RFWD3
MAGI1
TNFSF8
SEH1L
POLD4
TPGS1
TREML1
H2BW1
ZNF280D
TRIM8
FRY
RGL1
ARPC5
EPB41L3
CCKBR
CABIN1
TOMM34
KIFC3
GPR82
BNC1
AIG1
CXXC5
OVOL2
MRAP2
RGS8
KRT24
MYBBP1A
GGT6
SLC29A1
DEPP1
SULF2
OR52K1
LHX4
RB1
ITGAL
PPEF1
FGF11
CHRNB1
CSGALNACT1
PTPN3
ARHGAP8
S100A16
DENR
EDNRB
FAM118A
NLRP7
GNA12
CLPSL1
ALOX5
FBXW11
ST8SIA6
MPO
KRT35
PRSS8
PTPN14
CEBPA
WIPI1
EPS15L1
NXPH3
PRPH2
SELENOI
SGK1
CDK3
PTGES
RIOX1
SPAST
OR14K1
KANK1
SH3RF1
AMOT
ATP6AP2
C11orf94
ANK3
CYB5R1
MYORG
BAMBI
RPIA
CORO2A
APOBEC3B
KRT18
FAP
MICB
MTRNR2L8
BAHCC1
CLPB
KDM5C
ZNRF3
DIAPH3
UACA
ARHGAP45
RIPOR2
ZNF697
TNRC18
PARP4
GPR171
RDX
BCAR3
SEMG2
MTRNR2L1
TIAM2
BATF
JADE1
CWF19L1
TBL1XR1
OSBPL8
MTUS1
MS4A7
CSF2RA
SIGLEC6
IL36G
LRPPRC
CTSE
MTF1
TMCO6
CD14
IL22RA2
TFF1
MARCHF7
RBBP7
TNS1
LMCD1
NSD3
TUSC1
MAN1A1
IMPA2
GUCA2B
SALL4
SPINK4
SMC3
YY1
PPP2R3A
CANT1
GRAMD1B
ITGA3
TMCC3
SULT1A4
SULT1A3
BOLA2
CAPN5
BAIAP2
BOLA2-SMG1P6
TOP1MT
SPATA9
RHOBTB3
IGSF5
ERGIC1
LEPR
SLC12A6
APBB1IP
ALDH4A1
ARID5B
LHPP
HSF5
KCNJ15
ALDH3B2
H1-6
PINK1
NEU1
RTL8B
ERVW-1
GEMIN6
PDCD1LG2
ADAM22
DACT2
APMAP
FAM53B
CALHM4
EHBP1
LPP
TFDP2
METTL27
RBX1
ZDHHC3
C12orf66
LRRC14B
SELENOT
FAM107B
SCAMP2
SLC11A2
BMP4
DNAJC21
KEL
SLC25A13
CAMK2G
FBXO43
ZBED9
GATA2
MAB21L4
SH3BGRL2
LGR6
VGLL1
OLAH
GOLGA8B
RIMKLB
CITED4
BRI3
SIGLEC15
TECR
DNAJB1
DPP4
CDC14B
CLIC4
TTYH3
HEATR6
WDR25
WARS1
YEATS2
PEMT
YBX3
HSPA2
TRIM22
NAGK
KLRC3
SPR
HID1
FZR1
PLA2G2E
PXN
ALPK3
UBE2V1
TEX14
CNNM3
MESP1
STAU1
NKX1-2
PORCN
MORC4
IGFL1
ADGRL3
FRMD4A
VAMP8
ADGRF4
ENSA
HK1
PDIK1L
IRAK2
ADIPOR1
NHSL1
H3-5
SDCBP2
RGS3
CLASP2
CDCA4
CREM
PICALM
UBR5
KRT23
SPECC1L
SPOP
KCNJ5
BORCS6
PSTPIP1
TMEM150A
DNAJB2
PRDX3
CRY1
RPN2
MROH8
CLOCK
GBP3
GRHL3
ARHGAP40
OR2B11
SYTL5
TMEM9
UBALD2
SLC6A4
CDH5
NOS2
IFNB1
DPPA3
FBRSL1
BANP
PES1
CSN3
DCTD
LOC112694756
IKZF4
GABARAPL1
MESD
XCR1
CRISP1
DAB2IP
H2BC17
H2AC17
ANKRD2
RNF111
ITGB3
NF2
TOE1
MUTYH
CTDSP1
MRS2
NEURL3
TRIM16L
SOX7
GPRC5C
MYMX
TRA2B
ULK2
CYB5A
RPF1
MME
TIMP4
DNMBP
NFYB
CCDC177
ZNF451
EIF3C
SCHIP1
CD274
LOC112577592
TXNRD2
CRYGD
BBS7
EPHB2
ACE2
TNFAIP3
NRK
ANXA6
SZT2
MED8
NAA38
LGALS8
TMEM88
CYB5D1
MESP2
TBC1D5
NFIL3
KMT5C
LACTBL1
SLC9A8
MSANTD3-TMEFF1
CFAP410
MOG
PDK1
LARP1
FCGR1A
DUSP13
SEMA4C
XPNPEP1
MYOZ2
ANXA1
RBM47
TPST2
PHLDB3
SLC35A2
FAR2
ZMYND11
NSFL1C
MAFG
PLS1
FIGNL1
MRPL38
FMN1
HMGCS1
SH2D5
EPO
SLC13A3
HNF4G
PRTG
TNKS2
IL36RN
NAA60
ADGRG1
NEBL
DUSP9
RAB30
ILF3
C9orf131
CDK7
YPEL5
RABEP1
KYAT1
ENTPD4
HSPB7
CLCNKA
TNRC6A
WDR87
SIPA1L3
TGM2
SWI5
GOLGA2
SNX24
SPNS3
SLC2A3
CYS1
TMEM30A
LZTS3
RANBP2
GNAI1
CEP295NL
EPHA4
PHF20
TOMM70
LNP1
FYB1
OR2C3
TJAP1
PLA2G6
LRMDA
GDF6
SIRPA
ZNF83
MCAM
CSH2
AP5B1
TBC1D12
LYPLA1
ZNF614
RHBDD2
CHRNA10
SASH1
LATS1
SOCS2
WEE1
TMEM267
CHMP5
BAG1
BCR
KIAA1586
TPRN
CYBRD1
CLDN4
SCNN1B
RIC1
NDUFA5
TEN1
ACOX1
CKAP5
RNASE7
HNRNPF
KLRC2
AHCYL1
MED13L
FGFR2
ABCC2
SPARC
HS3ST5
GGTLC1
TMC1
C1QBP
KBTBD6
NAPEPLD
EFHB
CMYA5
MIOS
ZNF608
SKIL
F2RL1
UXS1
VWA3B
ARTN
ACSL1
RAD23B
ZAP70
SLC48A1
RNASE12
RNASE11
NOS1AP
ZMYND8
SPRED2
UBXN2B
PADI1
ADAT1
TEX101
DENND1A
HMCN1
IL31RA
CPVL
CHN2
DBN1
LSR
BACH2
KRT12
HPS1
CASD1
CRYGC
CD2AP
SERPIND1
IGFL2
SPTSSA
WWC1
ZNF90
CAMK1G
ZFHX3
HERPUD2
RNF144B
PLEKHF1
SMIM2
BRD3
LIMA1
SULT2B1
CCL28
DUSP3
CFAP97D1
FLVCR2
VPS36
MRPS11
MRPL46
OBSL1
INHA
TNFRSF19
HAND1
TLR7
SLC16A7
PLXNA2
AQP3
ZFPM1
DNASE1L3
CGN
VIM
GJA5
MYBL2
CORO1B
CABP4
UGP2
BTG1
FAAP20
CKAP2L
TMEM94
KRTAP4-2
KRTAP4-1
TCAF2
KAT2B
GNG10
SREK1
SEPTIN3
BIRC7
LAMB1
ZNF468
CLCC1
YAP1
HK2
NR4A3
CD177
CYP1B1
PNKD
LIMS2
TMEM45B
ENTPD7
FRAS1
EIF4A1
FBXO22
ETV3
SEC22C
NKTR
DUSP21
H2BC15
H2AC15
KDM2B
CATSPERG
KCTD7
CEP164
WIPF1