ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017710 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◣ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ HDAC6: STRING

ZNFX1
EEF1A1
H2AC19
H2AC18
EIF3E
B2M
KRT36
GTF2B
POLDIP3
SRSF7
PRDX1
FUS
TRAF7
H2BC11
H2AC11
H2BC21
H2AC20
NME1-NME2
NME1
RPS29
SRSF2
MFSD11
NAT10
RCC1
PMAIP1
DDX5
ANGEL1
MAGOH
AMD1
RPL28
TUBB4B
RPS27
RANBP2
RPL27
RPS20
RPLP1
ZC3H10
TFPT
PRPF31
LY9
SSNA1
RPL10
ANAPC2
SNX5
MGME1
H2AC21
GIPR
CSRNP1
NDUFS7
SIRT4
BTG1
IFRD1
CWC25
ZBTB4
POLR2A
H2AX
MFSD4B
HNRNPA1
CWF19L1
CBX5
H2BC5
THBS4
RPTOR
MTX3
RPL29
H4C15
H4C14
AMZ2
CALM2
HSP90AB1
MRPL44
PSMD9
HPD
ZBTB37
H2BC8
H2AC8
H4C3
TAF12
SH2D2A
NTRK1
BCAR3
IRF9
DEF6
EIF4G2
TRMT61B
HAX1
DENR
NPAS4
CLK1
AP3S2
JUN
BRD2
ZBTB40
IRF1
BCL2A1
GADD45B
IQGAP2
NUP62
IL4I1
ATF5
SLC7A5
RPS6
SSBP1
NUFIP1
NOP58
GPALPP1
NOLC1
CAMLG
HERPUD1
VPS72
H4C12
H4C11
MRPS23
CKS2
ZZEF1
SRGN
CYB5D2
RPL10A
ATP5MC3
RAD23A
CCNL1
MRPS18B
IL21R
PCNA
RSRP1
TUT1
RANGAP1
APTX
STOML2
RUNX1
MRFAP1
CSTF1
AURKA
TNF
RPS13
ID2
SAR1B
CENPM
LUC7L2
FMC1-LUC7L2
FMC1
PTBP1
GALK2
DDX19A
COPS2
RPLP0
EEF2
SLC3A2
STK40
RRM1
RPL23A
RAB7A
NR1H3
ILF3
ACP2
OXSM
NGLY1
MRPL24
ITGAL
INO80B
DCP1A
EIF1
SMG5
RPLP2
FBXW9
MTF2
MMACHC
HPS5
GTF2H1
CCDC163
C16orf91
HNRNPH1
RSL1D1
DNAJA3
GTPBP6
NSA2
GFM2
EHD4
SRSF1
NOC4L
DNAJC16
DDX51
ANAPC10
ABCE1
METTL16
ITPR1
CCDC91
UBE2I
SDCBP2
EIF4A1
YARS1
S100PBP
KCNAB2
XPC
TXNRD1
RPL9
PRMT5
MRPS14
LSM3
LIAS
ZNF132
PPP4R3A
NAA16
MTRF1
GABPA
EHD1
ATP5PF
NABP1
DEDD2
BTF3
DDIT4
CXXC1
H2BC12
H2AC12
SFPQ
NUP54
MYL6B
EIF3K
DPP9
DDX21
C2orf42
SRSF5
H3C1
H4C4
RBM3
TRA2B
THADA
TCAF2
SIRT6
SH2D1A
CDV3
ANKRD24
AIM2
SLC1A5
MTHFD2
ATF3
FBXO31
TSSC4
RGL4
RPL38
YTHDC1
OCIAD1
MORC3
NOB1
SF3A3
PAFAH2
MITD1
MAK16
FADD
SEPTIN7
RMND1
NUFIP2
ARMT1
PKNOX1
LARS2
CDK12
C8orf37
NDUFB5
MRPL47
CHPF2
CCT8
RBMX
HNRNPA3
HSP90AA1
RPS15
SF3B1
RPL15
RPL12
RGPD8
RGPD5
PURB
NUTM1
NOP10
NKIRAS1
LRSAM1
IL23R
HNRNPAB
CHD8
WDR4
TCTA
RHOA
EIF3J
RGPD2
RGPD1
SKP1
TNFSF14
SLFN13
SAMD4B
LSM5
CITED2
POLR3E
WDPCP
TRMT2A
RANBP1
RAB6A
MDH1
ETFBKMT
ATP13A1
HEXIM1
SCAF11
RBM18
POU2AF1
MRRF
MRPL55
LRRFIP2
KIF15
KIAA1143
COX5B
SLC25A51
B3GAT3
APOBR
C19orf48
ZNF106
SPRYD4
RPL22L1
RETSAT
ASXL2
TMEM101
SNX9
NLRC5
KRR1
GPN2
CCDC107
MAPKAPK5
TSPYL2
PPP1R8
MSL2
METTL3
LONP1
ENO1
CCNT1
CATSPERD
TMEM259
RHBDD1
PNP
COX8A
DNAJB4
PPIL4
RPS2
ZNF207
ZMPSTE24
TXN2
SUPT5H
STT3A
SNRPE
SHF
RSL24D1
RFFL
MOK
LAX1
H1-3
ENOSF1
ALG10B
SHISA5
RPF2
MRPL45
GTF2H3
EIF2B1
SEMA3B
RPS12
TRAFD1
TOGARAM1
SERP1
RBM25
NOP16
KSR1
KMT2D
KLHL28
HIGD2A
FURIN
EIF2A
CASP8
BTRC
NUP214
IMPDH2
IER3
ZNF764
SCAND1
HMGN4
DNAJB2
DDIT3
TBRG4
SERBP1
PRRC2C
POLA2
OSM
FAM241A
AP2B1
ALG1
ZNF320
PPP1R15A
PLD6
ATP5MC2
H3-3B
ZNF3
VTA1
RRNAD1
NMBR
ISG20L2
DDI2
CRADD
CCR7
ATG5
TATDN2
SPHK2
SLC2A11
RPL18
ITPRIP
ITFG2
H2BC4
H2AC6
IER5
VMAC
PRPF19
NECAP1
NDUFA11
ELOC
MRPS7
GGA3
CIRBP
SACM1L
TAP1
SPATA5L1
RPL14
QTRT2
PSMB9
GATM
DUS2
DDX28
CCDC191
CCDC174
NASP
MCCC1
IARS1
HSD17B12
H2BC18
FAM227B
DTWD1
COG3
ASB8
MAP2K7
SENP8
RPL34
PITPNM1
MYO9A
BORCS5
TMF1
PPME1
MORF4L1
CD55
CCAR2
C2CD3
WDR19
THOC1
MZF1
ARF4
WDR74
TUBA1C
NPM1
METTL1
KANSL2
IPO7
GOPC
EID2B
EEF1AKMT3
C1orf53
TOMM5
TICAM2
RPS3A
RBPJ
N6AMT1
DSTYK
CLP1
CD96
TAF1D
GTPBP10
FBRS
C11orf54
AMN1
NXF1
LBH
HIBADH
XRRA1
VASP
SPCS2
SMIM12
RPA2
NACA
MACO1
IL10RA
HM13
ABCD3
SNRPB2
SF3B5
MORN3
DYNC2I1
PNPLA8
PAGR1
GPR68
EMP1
DDX18
CLK4
DDX39B
TOMM20
FAF1
ERLIN1
SP2
STX11
ZFC3H1
TOMM6
SLC30A6
SLC25A23
SEC14L1
HILPDA
PTCD2
POLG
MRPS27
MLH1
GPR183
EPM2AIP1
NOL7
NFU1
LSM14A
USPL1
NFYC
MKRN2
LONP2
HMGB1
G3BP1
EIF4B
ABCC11
LDHA
ZNF589
UQCRC1
SLC30A5
SLC25A45
PARP2
MFSD8
MED18
MARS1
FBXO4
ARHGAP9
ABHD18
PPAN-P2RY11
PPAN
NDUFB6
MIS18A
ELK4
CTDSPL2
MAT2A
JUNB
GOLGA5
TSACC
RBM7
PRDM1
MRPS15
GPR137
CCT3
C11orf71
PDCD1
PBRM1
NUP42
NAGK
KXD1
GNL3
EPC1
ZNF248
SLMAP
PREPL
EBAG9
COMMD9
CAMKMT
METTL26
VPS35L
USP48
TOMM40
MFAP1
DUS3L
CUTC
COX15
EXOSC5
BCKDHA
NDUFAF5
ESF1
ESCO1
CDK13
C9orf72
TRAPPC4
THOC5
RPS25
MAP2K3
CSNK1A1
TAMM41
PSMD3
HIVEP2
LARP1
RAB18
NIP7
LOC100289561
HBS1L
GATB
EIF3D
CREM
COG8
TRMO
PXMP4
PPP1R15B
POLR1F
NUF2
NSRP1
MIDEAS
HINT3
HDAC4
WRAP53
VMP1
TP53
RPS8
PTRH2
GTF3C2
VCPKMT
TBC1D22A
RNF139
RCAN1
IPO4
GUF1
CD247
ABCA5
ZNHIT1
SNX17
SAFB
SAFB2
RPL5
PLOD3
NR1H2
EIF2B4
CACYBP
SPTBN4
BLVRB
KIFC1
FASTKD2
ALKBH2
SLC35A4
NUP205
COMMD1
CHFR
CCT4
APBB3
TRMT112
PRDX5
MFSD14A
COPS4
CLN5
ARIH2
SCAMP1
PTK6
PPP1R11
PMS2
NOL11
CEP350
AIMP2
RPL41
ZCCHC7
TRMT10C
PISD
PHB2
IFT172
FAM122A
LEO1
APOL2
RABGGTB
VPS29
RAD9B
TMEM186
STT3B
PMM2
ZNF33A
STX4
KNTC1
FAM71D
TMEM248
SRSF4
RNF34
GPN3
FAM216A
THRAP3
MRPL53
MBD1
TM9SF4
GRPEL1
RPS24
MRPS16
AARSD1
ZNHIT3
TMED5
CCDC18
TCTE3
ERMARD
AASDH
RBSN
DCLRE1B
AP4B1
UTP23
ATAD2B
PPP2R3B
SRRM1
ARL6IP1
CLUAP1
GREB1
CASP7
PDZK1
FKBP4
ADAMTSL5
RNF223
RPS6KL1
OVOL2
TFF1
TPD52L1
CYP1B1
CHPT1
CCDC88C
TIPARP
AMZ1
MCF2L
SLC25A24
AKAP1
MANEAL
NAB2
NFKBIA
TMEM229B
PLEKHH1
C1QTNF6
LY6E
USP31
ZNF185
UPF1
FOXK1
CABLES2
LAMC1
DOK7
KEAP1
TTC39A
RGS10
TFAP2C
LYPD6B
AFF1
VPS26C
FBP1
CRKL
CST6
CCN5
RAB40C
DMRT2
TBX2
KIF21A
SEPTIN9
UNKL
SLC25A36
DECR1
C1orf162
SLC25A42
FMN1
VWA2
CXXC5
BRI3BP
TTC6
FOXA1
MICOS10-NBL1
MICOS10
DNPEP
SNAI1
COLEC12
CLASP2
TCIRG1
UGT2B15
ANXA9
RCOR3
SERPINA1
FUT4
TUBA1A
ACACB
LATS1
CBWD5
CBWD3
TPD52L2
MTRNR2L8
ACIN1
MTRNR2L2
YPEL2
SYNE3
TMED8
IKBKG
CBWD6
GPSM1
ANKRD2
DSN1
VEPH1
ZNF346
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
TP53I3
NT5DC3
SLC25A19
PNKD
LRRC58
PRUNE1
MINDY1
CFAP206
PERP
EHF
HSPB8
CAP2
ARID5B
CBWD2
PRSS27
WNT16
ADARB1
LONRF2
PGLYRP2
ZFYVE28
CFAP99
NPEPPS
POLR3F
DZANK1
PCYT1A
MTRNR2L10
TTC39C
RNF144A
SHANK2
KCTD11
TST
MTRNR2L9
RTEL1
CYP4F11
SYT12
ARHGEF16
IL20
GRAMD1A
ROBO3
OBSL1
INHA
HK1
RPS6KA2
CASKIN2
SLC45A4
LOC102723996
ICOSLG
CDH18
FGFBP2
TNS1
LTBP1
DMPK
FRMD5
TBXA2R
MTRNR2L6
EXT2
NAIP
SLC29A1
SLC10A3
OAZ3
DLC1
BCL3
SNX10
VASN
PRSS22
HOMER2
FNIP2
KLRF2
RALGPS2
ZNF746
B3GNT6
ITGB2
SSTR2
ZNF552
MEF2A
ARFGEF2
SHCBP1L
ASPG
FARSB
ESR1
TPBG
ZNF385B
AMOTL2
BHLHE40
PTMA
STC2
PAQR5
HUWE1
SLC19A1
PTP4A2
RBBP5
PDCD6IP
NUP85
ABCA3
MICAL3
SETD2
BATF
SH2D3C
LRRC26
ANAPC7
SLC16A3
TM7SF2
MEIS1
UFM1
CACNA1H
DYSF
SEC14L5
ATP5MG
GOSR2
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
RHOBTB1
ZBTB5
NVL
HRK
ZNF576
IRGQ
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
IRF2BPL
MYH11
TSN
TRIM2
PSMD12
ITGB3
SEMA4G
DLL3
DCLK1
PKIB
ITPK1
EFTUD2
CCDC103
CUEDC1
BLCAP
PCTP
SLC11A2
RABL2B
PAX9
SMAD3
RP1
UPF2
STAM
SLC27A2
NR0B2
SH3BGR
LCA5L
CACTIN
FBXO34
PROP1
ACBD6
ZNF823
C4orf19
HSPA9
FIBCD1
PKM
NME6
H1-4
PKD2L2
PUM2
PI4KB
ARRB1
ZBTB7A
ARRDC2
JUND
SRD5A1
AP3M1
ADK
STMN3
SLC7A2
RABL2A
COL6A5
KCTD1
SPATC1L
IL17RB
CHDH
MACIR
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
IPO13
SULT1A4
SULT1A3
TOB1