ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932071 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◣ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
CASP7
PDZK1
FKBP4
ADAMTSL5
RPS6KL1
RNF223
FOXK1
CHPT1
AKAP1
CYP1B1
CCDC88C
NFKBIA
TFF1
OVOL2
NAB2
TPD52L1
MCF2L
LY6E
MANEAL
SLC25A24
AMZ1
TIPARP
CABLES2
USP31
CST6
C1QTNF6
ZNF185
TTC39A
UPF1
RAB40C
KEAP1
LAMC1
TMEM229B
PLEKHH1
UNKL
SPTBN4
BLVRB
DOK7
VPS26C
CRKL
SLC25A42
AFF1
CXXC5
PRUNE1
MINDY1
LYPD6B
ZBTB37
TCIRG1
SEPTIN9
RGS10
ANXA9
ACIN1
KIF21A
TPD52L2
DMRT2
FMN1
FBP1
LTBP1
VWA2
SLC25A36
CCN5
TBX2
FUT4
PNKD
SNAI1
GPSM1
TFAP2C
TP53I3
MICOS10-NBL1
MICOS10
CLASP2
ARHGEF16
ZFYVE28
CFAP99
SLC25A19
DSN1
C1orf162
DECR1
SYNE3
CBWD5
CBWD3
CBWD6
TST
DMPK
RCOR3
NIPSNAP2
ZNF346
OBSL1
INHA
TTC6
FOXA1
ANKRD2
VEPH1
PRSS27
PGLYRP2
CAP2
DNPEP
MYZAP
GCOM1
SERPINA1
HSPB8
LRRC58
EXT2
RNF144A
SYT12
CBWD2
TUBA1A
BRI3BP
FRMD5
UGT2B15
SH2D3C
TTC39C
ARID5B
OAZ3
ZNF746
YPEL2
CASKIN2
LATS1
PERP
IKBKG
FGFBP2
KCTD11
CYP4F11
SLC29A1
WNT16
RTEL1
SLC1A5
ZBTB5
RORC
TBXA2R
TMED8
CFAP206
ROBO3
RALGPS2
TM7SF2
UBE2I
SPATC1L
MTRNR2L2
MTRNR2L8
COLEC12
ACACB
SP2
TLE1
CCNP
NT5DC3
EHF
RGPD2
RGPD1
ADARB1
LONRF2
WDR74
NPEPPS
POLR3F
DZANK1
PCYT1A
SHANK2
MTRNR2L10
DNM2
MTRNR2L9
HK1
IL20
LEMD2
GRAMD1A
RFX1
RPS6KA2
SLC45A4
LOC102723996
ICOSLG
CDH18
NLK
HNRNPL
TNS1
OSBP
MTRNR2L6
EVI5L
NAIP
SLC10A3
DLC1
FADD
BCL3
TOM1L2
DRC3
SNX10
VASN
PRSS22
HOMER2
ARFGEF2
FNIP2
KLRF2
CIC
B3GNT6
GATAD2A
MAPKAPK5
ITGB2
SSTR2
ZNF687
ZNF552
MEF2A
PABPN1
SHCBP1L
ASPG
FARSB
PCIF1
FBH1
ANKRD16
ESR1
TPBG
CRK
ZNFX1
POLDIP3
ZNF385B
PTP4A2
AMOTL2
BHLHE40
PTMA
STC2
SETD2
PAQR5
ABCA3
HUWE1
EXOSC5
BCKDHA
FUS
SLC19A1
RBBP5
PDCD6IP
NUP85
ANKHD1-EIF4EBP3
ANKHD1
USP17L15
H4C15
H4C14
MICAL3
KHSRP
UNC5B
SIRT4
BATF
RPS29
PKIB
LRRC26
TTC21B
ANAPC7
SRSF7
H2AC19
H2AC18
SLC16A3
ANGEL1
KRT36
MEIS1
UFM1
KDM4B
HSP90AB1
CACNA1H
ITGB3
TRAF7
B2M
DYSF
SEC14L5
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
RHOBTB1
MRPS7
GGA3
SMAD3
ACBD6
SLC25A25
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
IRF2BPL
EEF1A1
MYH11
H4C12
TSN
UBE2L3
TRIM2
SEMA3B
H4C11
PSMD12
MAP3K11
TOMM40
PKM
H4C3
SEMA4G
DLL3
DCLK1
ITPK1
ZNF654
EFTUD2
CGGBP1
CCDC103
PRDX1
RPS27
CUEDC1
EIF3E
BLCAP
PCTP
KCTD1
SLC11A2
RABL2B
PAX9
PPP2R3A
SKP1
RP1
SP1
NBPF1
IL17RB
CHDH
UPF2
STAM
APPL2
SLC27A2
NR0B2
LARP1
CACTIN
SLC7A2
TANGO6
FBXO34
PROP1
H2AX
SRSF2
MFSD11
TOB1
ZNF823
ZBTB4
POLR2A
C4orf19
HSPA9
H2BC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
H2BC12
H2AC12
NME6
MAF1
PHACTR2
H1-4
PKD2L2
EIF1
NCOA7
RPLP1
PUM2
RAD23A
PROSER1
NHLRC3
NUP214
PI4KB
ARRB1
ZBTB7A
ARRDC2
JUND
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
SRD5A1
RPL27
RAB11B
SESN1
RPS20
AP3M1
ADK
STMN3
RABL2A
COL6A5
TBC1D10B
MYLPF
MACIR
CALM2
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
SLC35B1
RPLP0
NR2C1
DDX39B
OVOL1
H2BC11
H2AC11
MAT2A
CDH1
ACE
RPS2
CEBPD
BCAR3
REXO1
CYP3A43
DCAF7
NME1-NME2
NME1
TMEM17
HADHB
HADHA
P2RX7
RPL28
ASGR2
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
EEF2
BCAT1
GADD45B
ERG
JAKMIP1
IQGAP2
EOMES
STAM2
PHF3
GPR108
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
TTC8
LUC7L2
H2BC5
FMC1-LUC7L2
FMC1
CSRNP1
ID1
SIMC1
GSTA4
S100A10
RPS6
MSH3
DHFR
WIZ
HEXIM1
H2AC21
H2BC8
H2AC8
STIP1
MLPH
CHMP5
BAG1
TRIM45
OXCT2
LPIN1
MVB12B
DDIT4
ZC2HC1C
TMEM60
PHTF2
OPRD1
BRD2
ACYP1
TRAF2
PIK3CD
NAT10
RCC1
PRKACA
PMAIP1
GPAM
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
TJP1
SMC2
DTNB
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
IER3
EIF4A1
CIRBP
STRIP1
MAGOH
KAT6B
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
COX5A
APTX
SMG5
RPL38
JAK1
ADPGK
RANBP2
POLR3E
CCNL1
BRAF
KCNB2
FOXO6
TTI2
BASP1
NFE2L2
MAP1B
ARMH4
HSP90AA1
ZC3H10
TFPT
PRPF31
NOP14
KIFBP
GRK4
PDGFD
LY9
FAM199X
TMEM130
SSNA1
RPL10
RASSF5
ANAPC2
RAB7A
GTPBP6
SNX5
MGME1
DNAJB5
LYRM4
FARS2
DDIT3
TUBA1C
FAM151B
UBE2S
EMILIN2
SLC3A2
GIPR
EGR2
CBR3
PRSS23
PCBP1
RGS19
OPRL1
MACO1
FJX1
NDUFS7
MAD2L2
LRCH4
FBXO24
DRAXIN
CIBAR1
SKA1
MOB2
JPT1
FGFR1
ZC3H12B
TMEM150A
RHOF
THEM6
G3BP1
PTK7
PLAG1
MNS1
MAP2K7
DNAJB4
CHCHD7
ALKAL2
SOCS3
CALHM6
IFRD1
HNRNPAB
HFM1
CWC25
ATOH8
RABGGTB
HDAC4
EIF4A3
USP1
UNC5A
OSGEP
H3-3B
ARHGAP45
APEX1
PSMG2
DHRS2
CEP76
TMEM259
MFSD4B
FAF1
AXL
NDUFA4
GRAMD1B
ZNF799
TICAM2
HNRNPA1
CWF19L1
CBX5
PDE4A
IER5L
H2BC4
H2AC6
FAM169B
DUX4
NXF1
KCTD12
CRTAP
THBS4
RPTOR
MTX3
H1-2
RPL29
H3C2
CYP51A1
PHF19
CIAO3
AMZ2
STT3A
MRPL44
ELK4
TCF3
RGS6
RASA4B
STX11
PSMD9
HPD
ABCA5
TAF12
SH2D2A
NTRK1
BFSP1
UBFD1
TUBB2B
IRF9
EARS2
DYNC2I1
DEF6
ARSI
SRSF5
FRMD6
KSR2
RIN2
ARIH2
NPPC
JUNB
TRMT61B
HACD1
ICE1
HAX1
DENR
COX7A2L
CHN1
SUDS3
OGDH
NUDT4B
NPAS4
ITPR3
HERC5
CLK1
AP3S2
RALA
PAK1IP1
MXD3
JUN
GOLGA5
C6orf52
TMEM51
SS18L1
PSMA7
PACSIN2
PLPP3
PATJ
ZFP36L1
ZBTB40
RPS23
IRF1
FAM43B
ATP6AP1L
MKRN2
LBH
BCL2A1
ARHGEF5
NUP62
IL4I1
DNAJC1
ATF5
ZMYM2
SLC7A5
ASCL2
RAB20
MAGI3
IER5
ARHGEF35
TRMO
SSBP1
MIOS
MFSD14A
CYP1A1
ZBTB18
SNX12
NUFIP1
NOP58
GPALPP1
STXBP6
NOLC1
METTL26
MBD6
KANSL1
CEP350
CAMLG
ZC3H6
SLC24A4
HERPUD1
ACOT6
VPS72
SUSD2
STK11
SACM1L
LDHA
KMT2A
AGR2
THOC3
SPINK4
MRPS23
FLYWCH1
CKS2
ADIRF
SCML1
MYLIP
ANKDD1A
SAMD11
ZZEF1
WNT5A
SYNM
SRGN
NR2F2
CYB5D2
RPL35A
RPL10A
IQCG
ATP5MC3
NUDT4
MRPS18B
IL21R
PCNA
NXT1
MYH10
HOOK1
HIBADH
ACP6
TUT1
RBM26
RANGAP1
PRELID3B
MRPS26
ME3
STOML2
RUNX1
MRFAP1
GLS
CSTF1
AURKA
UBE2E2
TNF
RPS13
RIMBP3C
RIMBP3B
ID2
DSP
SUCLG1
SAR1B
RPL41
NKAIN1
JPT2
CENPM
RBM20
PTBP1
GALK2
FLT3
EPCAM
DDX19A
COPS2
ANKRD54
XXYLT1
TOM1
RRM1
RPL23A
NR1H3
ILF3
ACP2
RUBCNL
RIPK1
MIER2
OXSM
NGLY1
MRPL24
MFAP3L
ITGAL
INO80B
FSCN1
DCP1A
SLC20A1
RPLP2
FBXW9
MTF2
MMACHC
HPS5
GTF2H1
CCDC163
C16orf91
ZC3HAV1L
TARP
RSL1D1
RASSF1
HSF4
DNAJA3
NSA2
LGALS1
GFM2
EHD4
TPMT
SRSF1
NOC4L
KDM1B
EFCC1
DNAJC16
DDX51
CFAP92
ANAPC10
ABCE1
TPBGL
TMPRSS2
PLA2G6
METTL16
ITPR1
CSKMT
CCDC91
C11orf98
ZNF143
SDCBP2
SCD5
GPR27
ERICH5
YARS1
S100PBP
NECAB3
KCNAB2
HDGF
GAREM1
ETV3
CHD1L
CAPRIN1
XPC
TXNRD1
SV2C
SPSB4
RPL9
PRMT5
PDGFRA
NRCAM
MRPS14
LSM3
LIAS
GAS6
ZNF132
PPP4R3A
NWD2
NAA16
MTRF1
GTF2A1
GABPA
EHD1
ATP5PF
ZFYVE21
XRCC3
NABP1
DEDD2
BTF3
ACOT4
SPATA9
SMYD2
RHOBTB3
H2AZ2
FARP2
CXXC1
BLOC1S4
ANKRD39
TMSB15A
SLC19A2
SFPQ
XPNPEP1
SYT17
NUP54
MYL6B
EIF3K
DPP9
DDX21
C2orf42
ARHGAP29
ABCB10
SMARCA2
PCSK6
H3C1
HNRNPUL1
H4C4
GLT1D1
GALNT11
DOCK8
TCEAL2
RBM3
RBKS
MITF
JOSD1
HDGFL2
GLUD2
CALM1
BABAM2
TRA2B
TLN1
THADA
TCAF2
SRSF12
SLC40A1
SLC35D1
SIRT6
SH2D1A
PTPN20
KIAA0319
DNAH14
CREB3
CDV3
C1orf21
ATP2B1
ANKRD24
AIM2
ZZZ3
ZMYND8
UBE2R2
TM2D3
RPL3
PRKAA2
NEURL1B
MTHFD2
DCUN1D4
BHLHB9
ATF3
WTAP
USP33
SOD2
PLPPR5
LYRM1
DOCK10
CRELD1
CHGB
CCZ1B
TSSC4
STOX1
SMAD2
RGL4
MUC5B
YTHDC1
TUBGCP5
TARS3
SLC16A14
OLFML2B
OCIAD1