ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186767 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◣ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ HDAC6: STRING

MTRNR2L8
MTRNR2L2
MTRNR2L10
RGPD2
RGPD1
MTRNR2L9
MTRNR2L6
ASXL1
GREB1
CASP7
PDZK1
FKBP4
ADAMTSL5
RNF223
RPS6KL1
OVOL2
TFF1
TPD52L1
CYP1B1
CHPT1
CCDC88C
TIPARP
AMZ1
MCF2L
SLC25A24
AKAP1
MANEAL
NAB2
NFKBIA
TMEM229B
PLEKHH1
C1QTNF6
LY6E
USP31
ZNF185
UPF1
FOXK1
CABLES2
LAMC1
SPTBN4
BLVRB
DOK7
KEAP1
TTC39A
RGS10
TFAP2C
LYPD6B
AFF1
VPS26C
FBP1
CRKL
CST6
CCN5
RAB40C
DMRT2
TBX2
KIF21A
SEPTIN9
UNKL
SLC25A36
DECR1
C1orf162
SLC25A42
FMN1
VWA2
CXXC5
ZBTB37
BRI3BP
TTC6
FOXA1
MICOS10-NBL1
MICOS10
DNPEP
SNAI1
COLEC12
CLASP2
TCIRG1
UGT2B15
ANXA9
RCOR3
SERPINA1
FUT4
TUBA1A
ACACB
LATS1
CBWD5
CBWD3
TPD52L2
ACIN1
YPEL2
SYNE3
TMED8
IKBKG
CBWD6
GPSM1
ANKRD2
DSN1
VEPH1
ZNF346
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
TP53I3
NT5DC3
SLC25A19
PNKD
LRRC58
PRUNE1
MINDY1
CFAP206
PERP
EHF
HSPB8
CAP2
ARID5B
CBWD2
PRSS27
WNT16
ADARB1
LONRF2
PGLYRP2
ZFYVE28
WDR74
CFAP99
NPEPPS
POLR3F
DZANK1
PCYT1A
SLC1A5
TTC39C
RNF144A
SHANK2
KCTD11
TST
RTEL1
CYP4F11
SYT12
ARHGEF16
IL20
GRAMD1A
ROBO3
OBSL1
INHA
HK1
RPS6KA2
CASKIN2
SLC45A4
LOC102723996
ICOSLG
CDH18
FGFBP2
TNS1
LTBP1
DMPK
FRMD5
TBXA2R
EXT2
NAIP
SLC29A1
SLC10A3
OAZ3
DLC1
FADD
BCL3
SNX10
VASN
PRSS22
HOMER2
FNIP2
KLRF2
RALGPS2
ZNF746
B3GNT6
ITGB2
SSTR2
ZNF552
MEF2A
ARFGEF2
SHCBP1L
ASPG
MAPKAPK5
FARSB
ESR1
TPBG
ZNFX1
POLDIP3
ZNF385B
AMOTL2
BHLHE40
PTMA
STC2
PAQR5
HUWE1
EXOSC5
BCKDHA
FUS
UBE2I
SLC19A1
PTP4A2
RBBP5
PDCD6IP
NUP85
ABCA3
H4C15
H4C14
MICAL3
SETD2
SIRT4
BATF
SH2D3C
LRRC26
ANAPC7
SRSF7
H2AC19
H2AC18
SLC16A3
TM7SF2
KRT36
MEIS1
UFM1
HSP90AB1
CACNA1H
TRAF7
B2M
DYSF
SEC14L5
ATP5MG
GOSR2
C19orf48
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
RHOBTB1
MRPS7
GGA3
ZBTB5
NVL
GTF2B
HRK
ZNF576
IRGQ
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
IRF2BPL
EEF1A1
MYH11
H4C12
TSN
TRIM2
SEMA3B
H4C11
PSMD12
H4C3
ITGB3
SEMA4G
DLL3
DCLK1
PKIB
ITPK1
EFTUD2
CCDC103
PRDX1
RPS27
CUEDC1
EIF3E
BLCAP
PCTP
SLC11A2
RABL2B
PAX9
SMAD3
SKP1
RP1
UPF2
STAM
SLC27A2
NR0B2
SH3BGR
LCA5L
LARP1
CACTIN
ANGEL1
FBXO34
PROP1
SRSF2
MFSD11
ACBD6
ZNF823
ZBTB4
POLR2A
C4orf19
HSPA9
H2BC21
H2AC20
FIBCD1
H2BC12
H2AC12
PKM
NME6
H1-4
PKD2L2
RPLP1
PUM2
RAD23A
NUP214
PI4KB
ARRB1
ZBTB7A
ARRDC2
JUND
BTG1
SRD5A1
RPL27
RPS20
AP3M1
ADK
STMN3
SLC7A2
RABL2A
COL6A5
KCTD1
SPATC1L
IL17RB
CHDH
MACIR
H2AX
CALM2
SEC61B
HSH2D
ALG2
FAM3C
IPO13
SULT1A4
SULT1A3
TOB1
SLC35B1
RPLP0
DDX39B
OVOL1
PHACTR2
H2BC11
H2AC11
CDH1
ACE
RPS2
RORC
CEBPD
BCAR3
REXO1
CYP3A43
NME1-NME2
NME1
TMEM17
HADHB
HADHA
P2RX7
RPL28
ASGR2
TBCK
AIMP1
EEF2
BCAT1
GADD45B
ERG
JAKMIP1
IQGAP2
STAM2
TTC8
H2BC5
RPS29
ID1
RPS6
HEXIM1
H2AC21
H2BC8
H2AC8
MLPH
FGF18
FAM53C
CDC25C
OXCT2
MVB12B
DDIT4
ZC2HC1C
NCOA7
BRD2
ACYP1
PIK3CD
NAT10
RCC1
PMAIP1
EIF4G2
DDX5
CHST11
SUPV3L1
HNRNPH1
SMC2
PES1
IMPDH2
VDAC2
RSRP1
RPS12
IER3
EIF4A1
CIRBP
MAGOH
AMD1
TUBB4B
EIF1
MEI4
ESYT2
PSMD1
COX5A
APTX
SESN1
RPL38
NR2C1
RANBP2
POLR3E
CCNL1
FOXO6
TTI2
MAT2A
BASP1
MAP1B
PROSER1
NHLRC3
HSP90AA1
ZC3H10
TFPT
PRPF31
KIFBP
GFOD1
LY9
TMEM130
SSNA1
RPL10
RASSF5
ANAPC2
GTPBP6
EOMES
SNX5
MGME1
LYRM4
FARS2
DDIT3
TUBA1C
EMILIN2
SLC3A2
GIPR
EGR2
PCBP1
RGS19
OPRL1
CSRNP1
NDUFS7
MAD2L2
DRAXIN
SKA1
MOB2
JPT1
RHOF
NBPF1
THEM6
S100A10
PTK7
MNS1
MAP2K7
LUC7L2
FMC1-LUC7L2
FMC1
DNAJB4
ALKAL2
SOCS3
IFRD1
CWC25
ATOH8
RABGGTB
EIF4A3
USP1
SP2
OSGEP
H3-3B
ARHGAP45
APEX1
PSMG2
DHRS2
CEP76
TMEM259
MFSD4B
NDUFA4
ZNF799
HNRNPA1
CWF19L1
CBX5
PDE4A
IER5L
H2BC4
H2AC6
FAM169B
NXF1
THBS4
RPTOR
MTX3
H1-2
RPL29
H3C2
CYP51A1
PHF19
AMZ2
MRPL44
MISP3
STX11
PSMD9
HPD
TAF12
SH2D2A
NTRK1
BFSP1
TUBB2B
IRF9
DEF6
ARSI
SRSF5
KSR2
RIN2
NPPC
JUNB
TRMT61B
ICE1
HAX1
DENR
COX7A2L
SUDS3
NPAS4
ITPR3
HERC5
CLK1
AP3S2
RALA
PAK1IP1
MXD3
JUN
GOLGA5
C6orf52
TP53I11
TMEM51
ZFP36L1
ZBTB40
RPS23
IRF1
FAM43B
ATP6AP1L
PLXNB2
LBH
BCL2A1
NUP62
IL4I1
DNAJC1
ATF5
TJP1
SLC7A5
ASCL2
RAB20
IER5
ARMH4
TRMO
SSBP1
CYP1A1
NUFIP1
NOP58
GPALPP1
STXBP6
NOLC1
METTL26
MBD6
CAMLG
SLC24A4
HERPUD1
ACOT6
VPS72
SUSD2
SACM1L
LDHA
AGR2
SPINK4
MRPS23
FLYWCH1
CKS2
CHMP5
BAG1
ADIRF
SCML1
MYLIP
ANKDD1A
ZZEF1
WNT5A
SYNM
SRGN
NR2F2
CYB5D2
RPL35A
RPL10A
IQCG
ATP5MC3
MRPS18B
IL21R
PCNA
HIBADH
ACP6
TUT1
RANGAP1
MRPS26
STOML2
RUNX1
MRFAP1
CSTF1
AURKA
TNF
RPS13
RIMBP3C
RIMBP3B
ID2
DSP
SUCLG1
SAR1B
RPL41
NKAIN1
CENPM
RBM20
PTBP1
GALK2
FLT3
EPCAM
DDX19A
COPS2
XXYLT1
STK40
RRM1
RPL23A
RAB7A
NR1H3
ILF3
ACP2
RUBCNL
RIPK1
OXSM
NGLY1
MRPL24
ITGAL
INO80B
FSCN1
DCP1A
SMG5
SLC20A1
RPLP2
FBXW9
MTF2
MMACHC
HPS5
GTF2H1
CCDC163
C16orf91
TARP
RSL1D1
RASSF1
HSF4
DNAJA3
NSA2
LGALS1
GFM2
EHD4
SRSF1
NOC4L
EFCC1
DNAJC16
DDX51
CFAP92
ANAPC10
ABCE1
TMPRSS2
PLA2G6
METTL16
ITPR1
CSKMT
CCDC91
C11orf98
SDCBP2
SCD5
GPR27
ERICH5
EIF4E3
YARS1
S100PBP
NECAB3
KCNAB2
CAPRIN1
XPC
TXNRD1
SV2C
SPSB4
RPL9
PRMT5
PDGFRA
NRCAM
MRPS14
LSM3
LIAS
GAS6
ZNF132
PPP4R3A
NWD2
NAA16
MTRF1
GTF2A1
GRAMD1B
GABPA
EHD1
DTNB
ATP5PF
NABP1
DEDD2
BTF3
ACOT4
SPATA9
RHOBTB3
OPRD1
CXXC1
SLC19A2
SFPQ
FJX1
SYT17
NUP54
MYL6B
EIF3K
DPP9
DDX21
C2orf42
SMARCA2
H3C1
KCNB2
HNRNPUL1
H4C4
GLT1D1
DOCK8
RBM3
RBKS
MITF
CALM1
BABAM2
TRA2B
THADA
TCAF2
SRSF12
SIRT6
SH2D1A
CDV3
C1orf21
ATP2B1
ANKRD24
AIM2
ZMYND8
RPL3
NEURL1B
MTHFD2
FAM151B
ATF3
PRSS23
LYRM1
FBXO31
DOCK10
TSSC4
STOX1
RGL4
MUC5B
YTHDC1
TUBGCP5
SLC16A14
OLFML2B
OCIAD1
MORC3
NOB1
SLC25A27
SF3A3
RERG
PAFAH2
MITD1
MAP3K8
MAK16
GALNT18
CYP39A1
SEPTIN7
RMND1
NUFIP2
INTS6
CIBAR1
ARMT1
WWP1
PKNOX1
LARS2
CIB3
CDK12
C8orf37
TSPAN5
NDUFB5
MRPL47
MRC2
DDAH1
CHPF2
CCT8
TFRC
RORB
RBMX
HNRNPA3
GAD1
EDARADD
ABR
WNT2
TMOD2
SPINT1
RPS15
LYSMD2
SF3B1
RPL15
RPL12
RGPD8
RGPD5
PURB
NUTM1
NOP10
NKIRAS1
LRSAM1
IL23R
HNRNPAB
CHD8
CEBPB
ABTB2
WDR4
TCTA
TBXT
TBCA
SUSD5
RHOA
ORMDL3
KIAA1217
EIF3J
TNFSF14
SLFN13
SAMD4B
PTPRG
PCDHGC3
NPW
LSM5
CITED2
WDPCP
UBE2S
TRMT2A
ST8SIA5
SHH
RPS27A
RANBP1
RAB6A
PTH2
PIP5K1B
MDH1
KCTD12
ETFBKMT
CLHC1
ATP13A1
SCAF11
RBM18
POU2AF1
MRRF
MRPL55
LRRFIP2
KIF15
KIAA1143
KCNMA1
COX5B
UBC
SLC25A51
RPL21
MEF2C
B3GAT3
APOBR
ZNF106
SVIL
SPRYD4
RPL22L1
PPM1N
HHAT
FGFR1
RETSAT
ICA1
ASXL2
TMEM101
TEX15
SNX9
SLCO4A1
NLRC5
KRR1
GPN2
CCDC107
TSPYL2
PPP1R8
MSL2
METTL3
LONP1
HACD1
ENO1
CCNT1
CATSPERD
RHBDD1
PNP
MATK
COX8A
RFX1
PPIL4
ARID4A
ZNF207
ZMPSTE24
TXN2
SUPT5H
STT3A
SNRPE
SHF
RSL24D1
RFFL
MOK
LCMT2
LAX1
H1-3
ENOSF1
EEF1AKMT2
DZIP1
ALG10B
ADAL
SHISA5
RPF2
MRPL45
HNRNPA2B1
GTF2H3
EIF2B1
CBX3
UNC5C
TRAFD1
TOGARAM1
SERP1
RBM25
NOP16
LRP11
KSR1
KMT2D
KLHL28
HIGD2A
FURIN
EIF2A
CASP8
BTRC
ZNF764
SCAND1
IL15RA
HMGN4
DNAJB2
TBRG4
SERBP1
RASEF
PRRC2C
POLA2
OSM
KLHL35
JAK1
FAM241A
CALHM6
AP2B1
ALG1
ZNF320
SS18L1
PSMA7
PPP1R15A
PLD6
H4-16
ATP5MC2
ZNF3
VTA1
RRNAD1