ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5090184 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◣ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

MTRNR2L2
MTRNR2L8
MYH11
DLL3
LRRC26
FBN1
KCTD1
TUBA1A
TRIM2
CEBPD
TMEM17
BCAT1
JAKMIP1
FGF18
WDR74
NR2C1
TMEM130
RASSF5
EOMES
HRK
ACE
SRSF7
EGR2
MAD2L2
DRAXIN
JPT1
PTK7
ALKAL2
ATOH8
EIF4A3
FUS
ARHGAP45
MICAL3
RPS2
TRAF7
SIRT4
MISP3
BFSP1
RGPD2
RGPD1
ARSI
ITGB3
KSR2
NPPC
ZBTB4
POLR2A
DYSF
FAM43B
ARMH4
RAB20
MAPKAPK5
OXCT2
RPLP0
SLC24A4
ACOT6
MYLIP
ANKDD1A
WNT5A
SYNM
MRPS26
HEXIM1
SLC27A2
CHST11
H4C15
H4C14
RBM20
FLT3
EPCAM
XXYLT1
THEM6
RUBCNL
RIPK1
FSCN1
POLDIP3
SLC20A1
TSN
RASSF1
HSF4
MACIR
MAT2A
EEF2
EFCC1
CFAP92
CSKMT
C11orf98
POLR3F
DZANK1
EIF4E3
SOCS3
SCD5
GPR27
ERICH5
CIRBP
MAP1B
IMPDH2
SV2C
PDGFRA
NRCAM
ADARB1
GRAMD1B
NWD2
GTF2A1
RPS12
ACOT4
OPRD1
SPATA9
RHOBTB3
FJX1
SYT17
BTG1
KCNB2
GLT1D1
DOCK8
CALM1
RPLP1
SRSF12
C1orf21
PIK3CD
FAM151B
RPL3
NEURL1B
DOCK10
CACTIN
STOX1
H4C12
PDE4A
TUBGCP5
SLC16A14
OLFML2B
SLC25A27
GALNT18
CYP39A1
CIBAR1
INTS6
RPS27
TSPAN5
MRC2
DDAH1
TFRC
RORB
GAD1
EDARADD
EMILIN2
WNT2
TMOD2
SPINT1
LYSMD2
AMZ1
H2AX
CEBPB
ABTB2
TBXT
SUSD5
MEIS1
TUBA1C
PTPRG
PCDHGC3
NPW
BCAR3
GADD45B
PIP5K1B
UBE2S
KCTD12
ST8SIA5
PTH2
IQGAP2
KCNMA1
UBC
MEF2C
FGFR1
SVIL
PPM1N
HHAT
ICA1
GFOD1
TEX15
SLCO4A1
NBPF1
HACD1
MATK
DDIT3
ARRDC2
LCMT2
EEF1AKMT2
DZIP1
ADAL
HNRNPA2B1
CBX3
UNC5C
LRP11
HNRNPH1
IL15RA
HSP90AB1
RPL38
JAK1
CALHM6
KLHL35
SS18L1
PSMA7
H4-16
PRDX1
HSP90AA1
FRMD6
REXO1
RPS6
EIF4A1
MPPE1
GAS1
CD74
H1-2
SRSF3
PRRT4
PDE4C
ERO1B
ACOT1
H2AC19
H2AC18
KANK1
NXF1
P2RY1
CALR
SKP1
SFRP5
PFKFB3
CCL28
RPS20
PROS1
MMP28
CDCA7L
ACOT2
PDGFD
H3-3B
NRARP
BIN1
THOC3
RASL10A
IL7
DAB1
GTF2B
DNAJB4
TFCP2L1
SRSF6
CLGN
ZBTB37
CHN1
PLPP3
SPTAN1
EIF1
QDPR
H2BC4
H2AC6
SNORC
RASGRF1
JUNB
TMEM51
RPS26
PALD1
LRRFIP1
SPATC1L
UBB
SHISA3
B2M
RSRP1
RASD1
PTPN5
HMGA1
EIF4A2
CYP24A1
CLASP2
ZCWPW1
SEMA6A
RPS3
PHLDA3
MEPCE
KCTD15
KCNA6
LTBP1
AMOTL2
NME6
H1-4
TMEM259
NTRK2
H2BC5
HFM1
GOLGA5
WSB1
H4C11
TRMO
GCNT4
DUSP1
ATF4
TMEM229B
PLEKHH1
DGAT1
RABL2B
GLS
ZNF277
DOCK4
DIPK1C
RIMBP3C
RIMBP3B
KDM4A
NAAA
H2BC8
H2AC8
ZNF720
KIAA1549L
GLB1L3
APTX
CBR3
RIOX1
DNAJC25-GNG10
DNAJC25
DNAJA1
CSRNP2
ADRB2
SIX1
FGFBP3
ARHGAP42
RGS6
RNF125
MT3
PHACTR2
SMTNL2
MIIP
CAMK2N2
H2BC21
H2AC20
CCNL1
RPL41
RPL7A
MED22
LAP3
H1-10
C12orf57
C19orf48
LBH
DLX1
GNB4
EIF4G2
SIX5
ZNF853
VAMP1
TPCN1
IQCD
HLA-DQA1
GJA3
FZD2
NOP14
GRK4
LDHA
TPBGL
POLR3D
ENDOD1
FAM53C
CDC25C
TMSB10
RNF207
H4C3
HEXB
TNFRSF1B
IDI1
CALM2
PAH
OAF
ELOVL7
ASCL1
SLC3A2
POR
LSR
INPP1
ZC3HAV1L
SH3RF3
SFRP4
HOXA7
POLR2J
PLXND1
GPX1
IER5
KIAA1614
NSMCE4A
GPR157
AADAT
SLC27A3
FTL
RPL13A
PRRG4
STXBP6
RPL32
ENOX1
LENG9
HIBADH
SLC43A1
RPS27L
GDF1
CERS1
BMP2
IER5L
ADRB3
RHOB
RPL28
NXPH3
IRF8
H2AC21
SPSB4
RELT
HR
CLIC6
SRSF5
H4C2
CLTA
STAT1
GREB1
CASP7
PDZK1
FKBP4
ADAMTSL5
RNF223
RPS6KL1
OVOL2
TFF1
TPD52L1
CYP1B1
CHPT1
CCDC88C
TIPARP
SLC25A24
MCF2L
AKAP1
MANEAL
NAB2
NFKBIA
C1QTNF6
LY6E
USP31
ZNF185
UPF1
FOXK1
CABLES2
LAMC1
SPTBN4
BLVRB
DOK7
KEAP1
TTC39A
RGS10
TFAP2C
LYPD6B
AFF1
VPS26C
FBP1
CRKL
CST6
CCN5
RAB40C
DMRT2
TBX2
KIF21A
SEPTIN9
UNKL
SLC25A36
SLC25A42
DECR1
C1orf162
FMN1
VWA2
CXXC5
BRI3BP
TTC6
FOXA1
MICOS10-NBL1
MICOS10
DNPEP
SNAI1
COLEC12
TCIRG1
UGT2B15
ANXA9
RCOR3
SERPINA1
LATS1
FUT4
ACACB
CBWD5
CBWD3
TPD52L2
YPEL2
ACIN1
TMED8
SYNE3
IKBKG
CBWD6
GPSM1
ANKRD2
DSN1
SP2
VEPH1
ZNF346
MYZAP
GCOM1
TLE1
NIPSNAP2
CCNP
NT5DC3
TP53I3
PNKD
SLC25A19
LRRC58
PRUNE1
MINDY1
CFAP206
PERP
EHF
HSPB8
CAP2
ARID5B
CBWD2
PRSS27
WNT16
LONRF2
PGLYRP2
ZFYVE28
CFAP99
NPEPPS
PCYT1A
SHANK2
SLC1A5
MTRNR2L10
TTC39C
RNF144A
DNM2
KCTD11
TST
MTRNR2L9
RTEL1
CYP4F11
SYT12
ARHGEF16
HK1
IL20
LEMD2
GRAMD1A
ROBO3
OBSL1
INHA
RFX1
RPS6KA2
CASKIN2
SLC45A4
LOC102723996
ICOSLG
CDH18
NLK
FGFBP2
HNRNPL
TNS1
OSBP
DMPK
FRMD5
TBXA2R
MTRNR2L6
EXT2
EVI5L
NAIP
SLC29A1
SLC10A3
OAZ3
RALGPS2
DLC1
FADD
BCL3
TOM1L2
DRC3
SNX10
VASN
PRSS22
HOMER2
ARFGEF2
FNIP2
KLRF2
CIC
ZNF746
B3GNT6
GATAD2A
ITGB2
SSTR2
ZNF687
ZNF552
MEF2A
PABPN1
SHCBP1L
ASPG
FARSB
PCIF1
FBH1
ANKRD16
ESR1
TPBG
CRK
ZNFX1
ZNF385B
PTP4A2
BHLHE40
PTMA
STC2
SETD2
PAQR5
ABCA3
HUWE1
EXOSC5
BCKDHA
UBE2I
SLC19A1
RBBP5
PDCD6IP
NUP85
ANKHD1-EIF4EBP3
ANKHD1
USP17L15
KHSRP
UNC5B
BATF
RPS29
PKIB
SH2D3C
TTC21B
ANAPC7
SLC16A3
TM7SF2
ANGEL1
KRT36
UFM1
KDM4B
CACNA1H
SEC14L5
ATP5MG
SH3BGR
LCA5L
GOSR2
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
RHOBTB1
MRPS7
GGA3
ZBTB5
SMAD3
ACBD6
SLC25A25
NAIF1
NVL
ZNF576
IRGQ
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
IRF2BPL
EEF1A1
UBE2L3
SEMA3B
PSMD12
MAP3K11
TOMM40
PKM
SEMA4G
DCLK1
ITPK1
ZNF654
EFTUD2
CGGBP1
CCDC103
CUEDC1
EIF3E
BLCAP
PCTP
SLC11A2
PAX9
PPP2R3A
RP1
SP1
IL17RB
CHDH
UPF2
STAM
APPL2
NR0B2
LARP1
SLC7A2
TANGO6
FBXO34
PROP1
SRSF2
MFSD11
TOB1
ZNF823
C4orf19
HSPA9
NDRG2
FIBCD1
ARHGEF40
H2BC12
H2AC12
MAF1
PKD2L2
NCOA7
PUM2
RAD23A
PROSER1
NHLRC3
NUP214
PI4KB
ARRB1
ZBTB7A
JUND
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
SRD5A1
RPL27
RAB11B
SESN1
AP3M1
ADK
STMN3
RABL2A
COL6A5
TBC1D10B
MYLPF
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
SLC35B1
DDX39B
OVOL1
H2BC11
H2AC11
CDH1
RORC
CYP3A43
DCAF7
NME1-NME2
NME1
HADHB
HADHA
P2RX7
ASGR2
POLR2J3
TBCK
AIMP1
PLXNB2
ERG
STAM2
PHF3
GPR108
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
TTC8
LUC7L2
FMC1-LUC7L2
FMC1
CSRNP1
ID1
SIMC1
GSTA4
S100A10
MSH3
DHFR
WIZ
STIP1
MLPH
CHMP5
BAG1
TRIM45
LPIN1
MVB12B
DDIT4
ZC2HC1C
TMEM60
PHTF2
BRD2
ACYP1
TRAF2
NAT10
RCC1
PRKACA
PMAIP1
GPAM
DDX5
FBXO31
SUPV3L1
TJP1
SMC2
DTNB
PES1
AK2
VDAC2
IER3
STRIP1
MAGOH
KAT6B
TUBB4B
TP53I11
MEI4
ESYT2
PSMD1
STK40
COX5A
SMG5
ADPGK
RANBP2
POLR3E
BRAF
FOXO6
TTI2
BASP1
NFE2L2
ZC3H10
TFPT
PRPF31
KIFBP
LY9
FAM199X
SSNA1
RPL10
ANAPC2
RAB7A
GTPBP6
SNX5
MGME1
DNAJB5
LYRM4
FARS2
GIPR
PRSS23
PCBP1
RGS19
OPRL1
MACO1
NDUFS7
LRCH4
FBXO24
SKA1
MOB2
ZC3H12B
TMEM150A
RHOF
G3BP1
PLAG1
MNS1
MAP2K7
CHCHD7
IFRD1
HNRNPAB
CWC25
RABGGTB
HDAC4
USP1
UNC5A
OSGEP
APEX1
PSMG2
DHRS2
CEP76
MFSD4B
FAF1
AXL
NDUFA4
ZNF799
TICAM2
HNRNPA1
CWF19L1
CBX5
FAM169B
DUX4
CRTAP
THBS4
RPTOR
MTX3
RPL29
H3C2
CYP51A1
PHF19
CIAO3
AMZ2
STT3A
MRPL44
ELK4
TCF3
RASA4B
STX11
PSMD9
HPD
ABCA5
TAF12
SH2D2A
NTRK1
UBFD1
TUBB2B
IRF9
EARS2
DYNC2I1
DEF6
RIN2
ARIH2
TRMT61B
ICE1
HAX1
DENR
COX7A2L
SUDS3
OGDH
NUDT4B
NPAS4
ITPR3
HERC5
CLK1
AP3S2
RALA
PAK1IP1
MXD3
JUN
C6orf52
PACSIN2
PATJ
ZFP36L1
ZBTB40
RPS23
IRF1
ATP6AP1L
MKRN2
BCL2A1
ARHGEF5
NUP62
IL4I1
DNAJC1
ATF5
ZMYM2
SLC7A5
ASCL2
MAGI3
ARHGEF35
SSBP1
MIOS
MFSD14A
CYP1A1
ZBTB18
SNX12
NUFIP1
NOP58
GPALPP1
NOLC1
METTL26
MBD6
KANSL1
CEP350
CAMLG
ZC3H6
HERPUD1
VPS72
SUSD2
STK11
SACM1L
KMT2A
AGR2
SPINK4
MRPS23
FLYWCH1
CKS2
ADIRF
SCML1
SAMD11
ZZEF1
SRGN
NR2F2
CYB5D2
RPL35A