ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX23330420 | MDA-MB-231
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◣ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

SPATC1L
SP2
DNM2
LEMD2
OSBP
HNRNPL
NLK
PABPN1
GATAD2A
RFX1
EVI5L
ZNF687
FBH1
ANKRD16
CRK
TOM1L2
DRC3
CIC
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
PCIF1
NDRG2
ARHGEF40
MSH3
DHFR
WIZ
TRIM45
UBE2L3
UNC5B
TOMM40
PRKACA
GPAM
ZNF654
CGGBP1
ADPGK
ANKHD1-EIF4EBP3
ANKHD1
SLC25A42
DNAJB5
KHSRP
MAF1
SLC25A25
NAIF1
TMEM150A
KDM4B
TANGO6
RAB11B
AXL
NBPF1
DUX4
CRTAP
DCAF7
CIAO3
TCF3
RASA4B
GPR108
SIMC1
OGDH
NUDT4B
PACSIN2
TMEM60
PHTF2
ARHGEF5
TRAF2
ZMYM2
MAGI3
ARHGEF35
MIOS
SNX12
KANSL1
ZC3H6
STK11
KMT2A
TTC21B
BRAF
SAMD11
NUDT4
NXT1
MYH10
HOOK1
RBM26
PRELID3B
NOP14
GRK4
UBE2E2
JPT2
ANKRD54
MIER2
MFAP3L
FAM199X
KAT6B
TPMT
KDM1B
PLAG1
CHCHD7
HDGF
ETV3
CHD1L
UQCRH
LRRC41
LPIN1
ZFYVE21
XRCC3
SMYD2
H2AZ2
FARP2
BLOC1S4
ANKRD39
TMSB15A
APPL2
STRIP1
XPNPEP1
ARHGAP29
ABCB10
PCSK6
ANGEL1
AK2
CBR3
GALNT11
TCEAL2
JOSD1
HDGFL2
GLUD2
TLN1
SLC40A1
SLC35D1
PTPN20
KIAA0319
DNAH14
CREB3
ZZZ3
UBE2R2
TM2D3
PRKAA2
DCUN1D4
BHLHB9
WTAP
USP33
SOD2
PLPPR5
CRELD1
CHGB
CCZ1B
SMAD2
POLR2J3
JAK1
TARS3
KCTD18
KCNS3
EPB41
C22orf39
AGK
PDGFD
RC3H1
PUM1
PDXDC1
LYPLA1
DENND1B
PPP2R3A
EIF1
TMCC3
SPIDR
SMIM10L2B
P4HA3
NR2C2
NFATC2IP
DEK
C1QBP
ARHGAP39
HDAC4
CLVS2
CANX
TBC1D10B
MYLPF
PHF3
OPRD1
FBXO31
PCDH9
MAP1LC3B
HYAL1
GCLM
YWHAH
TRIM39
TP53INP2
SBF2
NFE2L1
FTH1
DPY19L4
CDC25A
CCDC160
ATL2
AKAP1
GPR180
LRCH4
FBXO24
ZNF326
VPS37B
VGLL3
RFX6
RBM17
PI4K2A
LPAR3
AP2A1
RAB40C
UBN2
POFUT1
PLAGL2
MAP2K4
LRRC8B
INO80D
HDDC2
CNNM3
PLXNB2
TXLNA
RASGRF2
BEX1
PIP5K1B
G3BP1
SERPINB6
RAPH1
PARD3B
LRRC8A
KYAT1
CTTNBP2
COQ7
PKIB
MACO1
HFM1
LHPP
DNAH9
WNT2B
TRIM24
RCC1L
FAM76A
ATRIP
ZCCHC3
UAP1
TCTEX1D1
SAP30L
MED26
HTATSF1
ADA
TMTC1
SUV39H2
SMOX
DSE
ARAP3
RABGEF1
MTHFD1L
ZNF275
SEPHS2
SDCCAG8
RGS2
KMT5B
CEP170
CDKL1
AKR1B1
ARFGEF2
DTNB
VHL
TMEM164
RRAGD
PIN1
MIER1
MAP7D3
ELL
DHX30
CTNNBL1
CPSF6
CPLX2
AUH
LEPR
CHRDL1
FAM53C
CDC25C
RGS6
VARS1
SLIT3
SIPA1L1
RALGAPA1
PRR5-ARHGAP8
PRR5
PALM2AKAP2
MRAS
KCNA3
H3C15
H3C14
FCHO2
FANK1
CYLD
CNOT6
CITED1
BEX2
ABCA5
ST6GALNAC3
FAR1
DAPK3
FGF18
FAF1
STON2
SMURF1
SLC6A6
PSEN2
PDE4B
NDST3
CFAP300
CHMP5
BAG1
TSPAN10
SNX7
SAMD5
POGLUT3
NPLOC4
LRP12
GNG12
DPYD
DENND11
ADCK2
RAB5B
ZSWIM4
YBX3
TRMT44
TPK1
STRBP
RBX1
PRIMA1
MAPK8IP3
MAP7
KCTD13
HINT2
FAM168B
CPOX
CDH24
B3GALNT2
ACOX3
ARIH2
TMEM61
SLC12A9
NFIA
LRRC37A3
LMO4
LGR5
EPHB4
CSNK1E
CHST3
ANXA5
MAPKAPK5
NCOA7
SLC4A7
RNF19B
RGS7
PLEKHA1
GORASP2
GLG1
FBXO5
DEGS1
C16orf72
AP3M2
ADAMTSL3
VAMP4
TXNDC5
LGR4
HHIP
FYN
FHL1
FBXO30
FAM20B
ETNK1
EPHB6
DGCR8
CYREN
CT47A6
UNC5A
UBTD2
SYNC
SERPINB9
PDCD2
MAP10
GGA2
GDI1
CSRP2
ELK4
ZFAND2A
TLCD5
SLC35F4
SF1
RAB8A
PROK2
LAPTM4B
FILIP1L
ELL2
DENND6A
CTNNAL1
CACHD1
HK1
STK10
SMARCC1
SLC44A5
PRKACB
POLD2
PCGF5
MOV10
LYRM9
LRIG1
DIAPH2
BCL7C
TICAM2
TIAM1
MKRN1
LOC150051
GRK6
DIP2B
CALHM6
ZNF558
VCP
TPST2
PEX7
OSTF1
ODC1
NMRK1
MCOLN3
GRHL3
GAGE12H
GAGE12G
GAGE12E
GAGE12D
GAGE12C
F3
DOCK7
CYTH2
CTNNB1
CD276
C15orf61
ATG9A
ANO10
ANKZF1
ABHD5
NT5DC3
KCTD1
EIF4E3
KCNB2
UBE2S
ZSWIM7
TTC19
TMEM185A
TEX10
TARBP1
RBM15B
NOCT
MAST2
JARID2
HPRT1
HESX1
CTBS
C2orf69
BTG3
ARHGEF12
APPL1
RALGPS2
ZNF860
TRAP1
TFDP2
SHD
PRR16
PARD6B
OSBPL10
MYCBP2
MAP3K21
LAMA5
ITPRIPL2
WSCD2
VPS4A
TEAD3
ST3GAL3
SNRK
SLC9A8
RCN2
GXYLT1
FAM89A
ELF4
DACT1
C12orf75
ADAM15
SESN1
GAREM1
TMEM158
SRRD
SPRY1
SNRNP25
RAB11FIP2
POLR3K
PDE4DIP
NREP
HPS4
FADS3
BMP2K
ADIPOR1
TMEM229B
PLEKHH1
FGFR1
TOM1
TMED2
PEX10
MPP6
MBNL3
IMMP2L
DENND2D
SETD2
STK17A
STAC
RYR2
RIC1
PGBD5
P3H1
MFSD6
KRCC1
GLRX5
FKBP5
EIF2AK3
DACT3
CNNM2
BARHL2
SLIT2
SLC4A11
LIG3
GPD1L
GPC5
CCSAP
ATXN7
ASB1
ARHGEF11
MFSD14A
TLE4
THSD7A
RNF135
RAB24
PRELID1
PPM1H
OSTM1
LMBR1
LHFPL2
CLTB
C7orf50
ACBD6
XPO4
STRN
SERINC2
SENP3
ROBO2
NXF3
NOTCH2NLA
MAN1A1
MAFF
CSNK1G2
ASNS
ARHGAP36
SLC36A4
RHEB
RAB4A
MAPK1
LY75-CD302
LY75
LAD1
KIF27
GAN
FNBP1L
FAM8A1
ERAP1
SH3BGR
LCA5L
CEP350
ZNF32
ZNF281
ZCCHC18
TRIM11
TPRG1L
SLC2A1
RNF166
QSER1
PRDM11
PPP1CA
MCUR1
GLIPR2
ENDOV
CTU2
CT47A9
CT47A8
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
BOC
APCDD1L
ACTR1B
BRI3BP
GAGE2C
GAGE2B
GAGE2A
SMG5
DYNC2I1
ZNF318
VDAC3
URB2
UBA3
TBC1D4
TAF5L
SLC25A43
RPL6
RORA
ROR2
PTS
PTPN11
PRR7
PREX2
OR10AC1
NEK7
MATN3
KIF5B
HIP1
GLRX3
FAM207A
DCBLD1
DAG1
CREG1
CD59
C11orf24
UPF1
USP17L15
STK40
ZNF652
VPS36
SFT2D3
PELI2
DIDO1
LATS1
FAM151B
ZNF84
VANGL1
UBE2L6
TCF7L2
SMC1B
SEH1L
RP9
RIBC2
PTPRU
MAP11
LHFPL6
IQSEC1
GET4
FBXL3
FAM162B
ERN1
BEX4
ASTN2
AKAP5
SP1
CIBAR1
XRCC2
TRAM1
TAF7L
SMARCA1
SLC25A15
PXK
PRKG1
PHC2
PGS1
PFN4
NKRF
NAA20
METTL9
MAPK8
MAP4K5
LRRC8D
HSPA4L
GSDME
GDF10
FBXO9
FAM228B
FAIM
ATP6V1C2
ATL1
ASF1A
SLC25A24
WAPL
TCEAL6
PLAGL1
NPHS2
NOTCH2NLC
MRTFA
MANSC4
LPGAT1
LMO2
KLHL42
KCTD3
IQSEC3
CMTM8
CDC42EP1
PTP4A2
PRSS23
HNRNPAB
STARD7
SSX2IP
SOWAHD
SGPP2
PRKD3
MAPKAP1
MAP3K2
LETM1
LCORL
HEBP2
GOLGA7B
GOLGA6L7
FKBP9
ZBTB18
URGCP
UBE2D4
TTC9C
SYNJ2
SIK2
SERP2
SDK1
RCE1
PAXBP1
MORC4
KIF3A
ITM2B
HNRNPUL2
DESI2
CKAP4
CASR
CLTA
TBC1D10A
PIAS2
PDCD6
NPTN
NOS1AP
KATNAL2
ASAP1
CHN1
SLAIN1
SIPA1L2
SECISBP2
RAB3IL1
QSOX1
PTP4A1
PHIP
NUP153
MAP3K1
KLHDC2
CLIP4
CEP112
ACTR3B
IL17RB
CHDH
MKRN2
WDR45B
TMEM71
SLC45A3
RAI14
PNRC2
PHF20L1
MCM6
KLHL7
IBA57
ENGASE
CMTM7
CAMSAP2
ARL2BP
TMEM171
SKIDA1
PRKD1
PRKCZ
PDZRN3
NIPAL2
MAP3K9
LBR
KHDRBS1
ELOVL4
DTX4
SEPTIN9
PNKD
TJP1
UBFD1
EARS2
ZNF783
YWHAB
WDFY2
VGLL4
TMEM170B
TMEM170A
SYT14
SORT1
SMAD1
SLC22A15
SIRT5
RAD54L2
MORC2
MMP2
KAZN
GKAP1
DUSP23
DDHD2
BEND4
BAALC
FRMD6
TMEM117
SLC30A1
RNF180
PKD2
PGRMC1
PACS2
MTRR
MBTPS1
KIF23
GNG10
FASTKD3
EGLN1
BRWD1
BRF1
SHANK2
KCTD12
PLPP3
ZNF48
USP38
SLC27A4
RMC1
POLR1D
NOMO3
NOMO2
MAST4
LPAR1
LNX2
KCTD7
HIVEP1
GABRE
DOCK11
CD58
CCN2
C14orf28
B4GALT6
ANKFY1
FJX1
PATJ
ZSWIM5
UTP4
TWF2
TTC21A
TMEM64
TMEM54
SLC16A6
LMO7
LIN9
GORASP1
FIGN
DERPC
DENND4B
CHTF8
ARSG
LYPD6B
NR2C1
ZC3HAV1L
USP24
TTC36
TTC22
TRANK1
TMEM25
SMPDL3A
RMND5B
RB1
RAB32
PPP4C
PDZD2
KATNB1
IDH2
GSTM4
FOXJ3
EVL
EP400
EFR3A
DHRS13
TMED8
AMD1
MAT2A
USP22
UNC79
TMEM65
THAP12
TGFBR3
TDRD7
TAB2
SLC2A13
SFXN1
SAMD15
MSANTD2
MCL1
HNRNPM
GVQW3
CRLS1
BTBD7
THAP4
SVBP
RTN4
RHOU
REEP1
PTGER3
POU4F1
NOTCH2
NOMO1
MPC1
HOXD8
FMNL3
EVI5
ERMAP
EPC2
DTNA
DNMT3B
DCBLD2
CEP68
CADM2
BACH1
ATG4B
ACTB
ADARB1
TOB1
YTHDF2
WDR91
SPSB1
SMYD4
SLC25A40
SERPINE2
RPA1
RNPEP
PFN2
NUDT19
NID1
NCKIPSD
MACROH2A2
KMT2C
HOXD13
GIPC2
DBF4
CREBRF
CEBPG
BPNT2
ITGB3
PKM
RAB7A
ME3
YWHAQ
TCP1
SH3GLB1
NMT2
MTMR12
MIXL1
KCNQ5
ELFN2
DTNBP1
CTSD
C2CD2L
ZNRF2
SESTD1
RUFY3
NCLN
LRP5L
ISOC1
HTT
EXOC6
CSGALNACT2
C1orf198
ARL2
AMPH
USP25
UHRF1BP1
SLC15A1
RAVER2
PPARD
MEGF9
KLC2
HGH1
GATAD1
GARRE1
FAM160B1
ERRFI1
DYNC1LI1
CRPPA
COA8
CARD10
BTBD3
BAG5
ATF1
ABCC4