ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932063 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◣ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
CASP7
FKBP4
PDZK1
OVOL2
ADAMTSL5
TFF1
RNF223
TPD52L1
RPS6KL1
CYP1B1
CHPT1
TMEM229B
PLEKHH1
CCDC88C
TIPARP
UPF1
AKAP1
AMZ1
MANEAL
USP31
SLC25A24
NFKBIA
FOXK1
ZNF185
TFAP2C
NAB2
C1QTNF6
RGS10
MCF2L
LY6E
LAMC1
DMRT2
FBP1
CABLES2
EHF
DECR1
KEAP1
SPTBN4
BLVRB
KIF21A
C1orf162
FMN1
DOK7
CCN5
COLEC12
TBX2
VPS26C
VWA2
TTC39A
AFF1
ACACB
YPEL2
RAB40C
TMED8
LYPD6B
UNKL
CRKL
SLC25A42
SEPTIN9
DNPEP
SERPINA1
CST6
SLC25A36
RCOR3
ZBTB37
BRI3BP
IKBKG
FUT4
TLE1
UGT2B15
CBWD5
CBWD3
CBWD6
TUBA1A
ANKRD2
GPSM1
VEPH1
CXXC5
ZNF346
SYNE3
DSN1
LATS1
CCNP
MYZAP
GCOM1
NPEPPS
CDH18
TTC6
FOXA1
MICOS10-NBL1
MICOS10
SHANK2
NIPSNAP2
NT5DC3
TPD52L2
ADARB1
LRRC58
LOC102723996
ICOSLG
PERP
CFAP206
TCIRG1
PCYT1A
ZNF552
LONRF2
TTC39C
TP53I3
WNT16
RHOBTB1
CLASP2
PGLYRP2
SNAI1
ZNF385B
ARID5B
ANXA9
ROBO3
PRUNE1
MINDY1
PRSS22
PAX9
ACIN1
GRAMD1A
CBWD2
PTMA
SLC45A4
KLRF2
HSPB8
CAP2
RNF144A
IL20
CYP4F11
HOMER2
PRSS27
PAQR5
SNX10
SLC1A5
MEF2A
TBXA2R
TNS1
SSTR2
OBSL1
INHA
TPBG
FRMD5
TST
ZFYVE28
CFAP99
P2RX7
FADD
PNKD
ERG
ITGB2
CACNA1H
FGFBP2
BCL3
NR0B2
EXT2
ARFGEF2
HK1
SLC19A1
ABCA3
NAIP
PTP4A2
MVB12B
RALGPS2
DLC1
ARRB1
SH3BGR
LCA5L
DCLK1
ZNF823
SLC27A2
PKD2L2
KCTD11
RPS6KA2
FNIP2
CUEDC1
SLC25A19
MEI4
PUM2
FAM3C
SHCBP1L
FBXO34
CASKIN2
SMAD3
DMPK
SLC16A3
RTEL1
ASPG
SEC14L5
BATF
ZNF746
PKM
RGS19
OPRL1
PCTP
SKA1
MOB2
RHOF
LARP1
ARHGEF16
WDR74
ZNF799
FAM169B
CYP51A1
HUWE1
PKIB
TUBB2B
SLC29A1
RP1
RIN2
HSH2D
SLC7A2
HERC5
BHLHE40
RALA
MXD3
ZBTB7A
TP53I11
PLXNB2
DNAJC1
TJP1
AMOTL2
ESR1
MBD6
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TOB1
COX5A
PROP1
CDH1
SUSD2
AGR2
STC2
CHMP5
BAG1
SPINK4
FLYWCH1
ADIRF
SLC11A2
SYT12
PDCD6IP
NR2F2
SETD2
CYP3A43
ACP6
SEMA4G
ITPK1
DSP
SEMA3B
ZNF576
IRGQ
TARP
LGALS1
IL17RB
CHDH
TMPRSS2
PLA2G6
GAS6
DTNB
IER3
SMARCA2
KIFBP
MITF
ATP2B1
ZMYND8
PRSS23
LYRM1
MUC5B
RERG
MAP3K8
WWP1
CIB3
ABR
S100A10
TBCA
KIAA1217
CSK
SLC10A3
OVOL1
UBE2I
ARID4A
BASP1
RASEF
MAP2K7
MLPH
LFNG
RTKN
MACIR
SYBU
C17orf77
UNC5A
PLA2G10
NBPF1
C4orf19
FSTL3
MTRNR2L6
SPATC1L
MTRNR2L2
MTRNR2L8
SP2
RGPD2
RGPD1
POLR3F
DZANK1
MTRNR2L10
DNM2
MTRNR2L9
LEMD2
RFX1
NLK
HNRNPL
OSBP
LTBP1
EVI5L
OAZ3
TOM1L2
DRC3
VASN
CIC
B3GNT6
GATAD2A
MAPKAPK5
ZNF687
PABPN1
FARSB
PCIF1
FBH1
ANKRD16
CRK
ZNFX1
POLDIP3
EXOSC5
BCKDHA
FUS
RBBP5
NUP85
ANKHD1-EIF4EBP3
ANKHD1
USP17L15
H4C15
H4C14
MICAL3
KHSRP
UNC5B
SIRT4
RPS29
SH2D3C
LRRC26
TTC21B
ANAPC7
SRSF7
H2AC19
H2AC18
TM7SF2
ANGEL1
KRT36
MEIS1
UFM1
KDM4B
HSP90AB1
ITGB3
TRAF7
B2M
DYSF
ATP5MG
GOSR2
C19orf48
SART3
ISCU
PNO1
MRPS7
GGA3
ZBTB5
ACBD6
SLC25A25
NAIF1
NVL
GTF2B
HRK
FBN1
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
IRF2BPL
EEF1A1
MYH11
H4C12
TSN
UBE2L3
TRIM2
H4C11
PSMD12
MAP3K11
TOMM40
H4C3
DLL3
ZNF654
EFTUD2
CGGBP1
CCDC103
PRDX1
RPS27
EIF3E
BLCAP
KCTD1
RABL2B
PPP2R3A
SKP1
SP1
UPF2
STAM
APPL2
CACTIN
TANGO6
H2AX
SRSF2
MFSD11
ZBTB4
POLR2A
HSPA9
H2BC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
H2BC12
H2AC12
NME6
MAF1
PHACTR2
H1-4
EIF1
NCOA7
RPLP1
RAD23A
PROSER1
NHLRC3
NUP214
PI4KB
ARRDC2
JUND
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
SRD5A1
RPL27
RAB11B
SESN1
RPS20
AP3M1
ADK
STMN3
RABL2A
COL6A5
TBC1D10B
MYLPF
CALM2
SEC61B
ALG2
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
SLC35B1
RPLP0
NR2C1
DDX39B
H2BC11
H2AC11
MAT2A
ACE
RPS2
RORC
CEBPD
BCAR3
REXO1
DCAF7
NME1-NME2
NME1
TMEM17
HADHB
HADHA
RPL28
ASGR2
POLR2J3
TBCK
AIMP1
GFOD1
EEF2
BCAT1
GADD45B
JAKMIP1
IQGAP2
EOMES
STAM2
PHF3
GPR108
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
TTC8
LUC7L2
H2BC5
FMC1-LUC7L2
FMC1
CSRNP1
ID1
SIMC1
GSTA4
RPS6
MSH3
DHFR
WIZ
HEXIM1
H2AC21
H2BC8
H2AC8
STIP1
TRIM45
OXCT2
LPIN1
DDIT4
ZC2HC1C
TMEM60
PHTF2
OPRD1
BRD2
ACYP1
TRAF2
PIK3CD
NAT10
RCC1
PRKACA
PMAIP1
GPAM
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
SMC2
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
EIF4A1
CIRBP
STRIP1
MAGOH
KAT6B
TUBB4B
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
APTX
SMG5
RPL38
JAK1
ADPGK
RANBP2
POLR3E
CCNL1
BRAF
KCNB2
FOXO6
TTI2
NFE2L2
MAP1B
ARMH4
HSP90AA1
ZC3H10
TFPT
PRPF31
NOP14
GRK4
PDGFD
LY9
FAM199X
TMEM130
SSNA1
RPL10
RASSF5
ANAPC2
RAB7A
GTPBP6
SNX5
MGME1
DNAJB5
LYRM4
FARS2
DDIT3
TUBA1C
FAM151B
UBE2S
EMILIN2
SLC3A2
GIPR
EGR2
CBR3
PCBP1
MACO1
FJX1
NDUFS7
MAD2L2
LRCH4
FBXO24
DRAXIN
CIBAR1
JPT1
FGFR1
ZC3H12B
TMEM150A
THEM6
G3BP1
PTK7
PLAG1
MNS1
DNAJB4
CHCHD7
ALKAL2
SOCS3
CALHM6
IFRD1
HNRNPAB
HFM1
CWC25
ATOH8
RABGGTB
HDAC4
EIF4A3
USP1
OSGEP
H3-3B
ARHGAP45
APEX1
PSMG2
DHRS2
CEP76
TMEM259
MFSD4B
FAF1
AXL
NDUFA4
GRAMD1B
TICAM2
HNRNPA1
CWF19L1
CBX5
PDE4A
IER5L
H2BC4
H2AC6
DUX4
NXF1
KCTD12
CRTAP
THBS4
RPTOR
MTX3
H1-2
RPL29
H3C2
PHF19
CIAO3
AMZ2
STT3A
MRPL44
ELK4
TCF3
RGS6
RASA4B
STX11
PSMD9
HPD
ABCA5
TAF12
SH2D2A
NTRK1
BFSP1
UBFD1
IRF9
EARS2
DYNC2I1
DEF6
ARSI
SRSF5
FRMD6
KSR2
ARIH2
NPPC
JUNB
TRMT61B
HACD1
ICE1
HAX1
DENR
COX7A2L
CHN1
SUDS3
OGDH
NUDT4B
NPAS4
ITPR3
CLK1
AP3S2
PAK1IP1
JUN
GOLGA5
C6orf52
TMEM51
SS18L1
PSMA7
PACSIN2
PLPP3
PATJ
ZFP36L1
ZBTB40
RPS23
IRF1
FAM43B
ATP6AP1L
MKRN2
LBH
BCL2A1
ARHGEF5
NUP62
IL4I1
ATF5
ZMYM2
SLC7A5
ASCL2
RAB20
MAGI3
IER5
ARHGEF35
TRMO
SSBP1
MIOS
MFSD14A
CYP1A1
ZBTB18
SNX12
NUFIP1
NOP58
GPALPP1
STXBP6
NOLC1
METTL26
KANSL1
CEP350
CAMLG
ZC3H6
SLC24A4
HERPUD1
ACOT6
VPS72
STK11
SACM1L
LDHA
KMT2A
THOC3
MRPS23
CKS2
SCML1
MYLIP
ANKDD1A
SAMD11
ZZEF1
WNT5A
SYNM
SRGN
CYB5D2
RPL35A
RPL10A
IQCG
ATP5MC3
NUDT4
MRPS18B
IL21R
PCNA
NXT1
MYH10
HOOK1
HIBADH
TUT1
RBM26
RANGAP1
PRELID3B
MRPS26
ME3
STOML2
RUNX1
MRFAP1
GLS
CSTF1
AURKA
UBE2E2
TNF
RPS13
RIMBP3C
RIMBP3B
ID2
SUCLG1
SAR1B
RPL41
NKAIN1
JPT2
CENPM
RBM20
PTBP1
GALK2
FLT3
EPCAM
DDX19A
COPS2
ANKRD54
XXYLT1
TOM1
RRM1
RPL23A
NR1H3
ILF3
ACP2
RUBCNL
RIPK1
MIER2
OXSM
NGLY1
MRPL24
MFAP3L
ITGAL
INO80B
FSCN1
DCP1A
SLC20A1
RPLP2
FBXW9
MTF2
MMACHC
HPS5
GTF2H1
CCDC163
C16orf91
ZC3HAV1L
RSL1D1
RASSF1
HSF4
DNAJA3
NSA2
GFM2
EHD4
TPMT
SRSF1
NOC4L
KDM1B
EFCC1
DNAJC16
DDX51
CFAP92
ANAPC10
ABCE1
TPBGL
METTL16
ITPR1
CSKMT
CCDC91
C11orf98
ZNF143
SDCBP2
SCD5
GPR27
ERICH5
YARS1
S100PBP
NECAB3
KCNAB2
HDGF
GAREM1
ETV3
CHD1L
CAPRIN1
XPC
TXNRD1
SV2C
SPSB4
RPL9
PRMT5
PDGFRA
NRCAM
MRPS14
LSM3
LIAS
ZNF132
PPP4R3A
NWD2
NAA16
MTRF1
GTF2A1
GABPA
EHD1
ATP5PF
ZFYVE21
XRCC3
NABP1
DEDD2
BTF3
ACOT4
SPATA9
SMYD2
RHOBTB3
H2AZ2
FARP2
CXXC1
BLOC1S4
ANKRD39
TMSB15A
SLC19A2
SFPQ
XPNPEP1
SYT17
NUP54
MYL6B
EIF3K
DPP9
DDX21
C2orf42
ARHGAP29
ABCB10
PCSK6
H3C1
HNRNPUL1
H4C4
GLT1D1
GALNT11
DOCK8
TCEAL2
RBM3
RBKS
JOSD1
HDGFL2
GLUD2
CALM1
BABAM2
TRA2B
TLN1
THADA
TCAF2
SRSF12
SLC40A1
SLC35D1
SIRT6
SH2D1A
PTPN20
KIAA0319
DNAH14
CREB3
CDV3
C1orf21
ANKRD24
AIM2
ZZZ3
UBE2R2
TM2D3
RPL3
PRKAA2
NEURL1B
MTHFD2
DCUN1D4
BHLHB9
ATF3
WTAP
USP33
SOD2