ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003071 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◣ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

RBL2
MTRNR2L8
CRPPA
ITGAM
HSD17B4
MTRNR2L2
CCDC141
NIPSNAP1
ENTPD1
ANKRD23
RNF43
TMEM52B
LNX1
COLEC12
ATP2B1
SLC10A6
MIS12
DERL2
RABGGTB
EID2
SLC7A6
SLC7A9
ANKRD1
SH3YL1
SH2D4A
ZNF749
KRTAP3-1
PKIB
OLFML1
POU5F1
PRKCZ
FGD3
GABRR3
SH3BP4
ZNF641
SLC7A7
C6orf163
CCR5
DUSP21
INSL4
ZNF343
DLG2
TMEM245
P2RX6
RGPD2
RGPD1
FAM110A
HERC4
FBL
ULK2
STS
SEH1L
BIN1
LRRC14B
UIMC1
KRT71
PLD5
LHX4
LSM14A
ANXA3
PIP4P2
IQGAP2
KDM5C
SNX27
HOATZ
BTG4
PLAAT5
SLC25A34
ADAP1
LSMEM1
ZNF444
CTNNAL1
NKIRAS1
C1QBP
SIX2
SUPT7L
SLC4A1AP
NANOGNB
BRD4
ERP27
TLK1
DAW1
TACC2
LACTBL1
FREM2
RASSF2
FUT3
FMN1
TRPM6
DEPP1
NCOA1
IL22RA2
DNMT3A
SPR
CSF1R
OR2B11
KIFC3
DOT1L
BABAM1
SRI
TNFAIP3
PLXNB2
LGR5
TNFAIP8
TMPPE
GLB1
CLTC
ZNF552
ZFPM1
CLCN4
KRT8
NRBP1
NPL
TENM3
USP11
ITGB6
TRIM22
NR4A1
PEX3
ADAT2
CDC14B
ORAI3
TRIM45
MYLK3
ADGRF4
PPARG
SLC45A4
LDAH
SLC25A26
MAGI1
MBOAT2
CCNL1
EIF3D
ZNF76
KIAA1586
HSD17B1
PCCB
TNRC6A
ANXA6
LHX8
PARP4
BAIAP2
MYO18A
MICB
PRORP
PPP2R3C
PDGFB
APBB1IP
C11orf94
MTUS1
ADGRG1
PIK3C2A
MPP4
GRHL3
SEPSECS
EXPH5
CSGALNACT1
MTRNR2L9
IGFL4
KMT5C
GALNT11
ABCB8
IFT43
TRIM16L
ZNF335
CLPB
ISM2
SLFN12
LATS1
TFDP2
GOLGA8B
AMOTL2
DENND6A
TMEM211
BLCAP
FERMT1
MKRN2OS
CYS1
SLC39A1
CDS1
SCNN1A
TTLL7
SYTL5
TREML1
SLC12A6
ARHGDIB
CHD3
EDNRB
RIOX1
ARHGAP45
PICALM
OSGIN2
TIGD2
SHROOM3
WT1
CCDC59
EHBP1
NSFL1C
TLN1
CREB3
WBP1L
C9orf131
PCYT2
CS
SCAMP4
ADAT3
NRK
BATF
RHOH
JUN
AMD1
MTARC1
GRAMD1B
LATS2
RFLNA
RNF19A
ARHGEF3
RBM45
BEST3
SPECC1L
WDR87
SIPA1L3
ATP1A1
DDX41
PTPRD
LMO7
S100A16
ZNF799
ZMYND11
RIMKLB
TLE3
RANBP2
SULT1A4
SULT1A3
MEF2A
PTN
KYAT1
LIMA1
PPP1R9A
NEURL3
HTRA4
CKB
SLC4A8
GALNT6
RHOB
TMPRSS11F
AGAP3
ADIPOR1
PLS1
FOCAD
SF3B4
WWOX
CD59
FSCN1
CYSLTR2
ALDH4A1
EHMT2
C2
PALM3
DTD2
STK11IP
HSPA9
SMARCA2
C11orf95
CALHM4
SPINK4
SPHK1
MID1
NHSL1
FAM83A
ASAP1
MRPS24
HK1
MPP1
GLDN
DGKD
CCNI2
ALDH3B2
ZNF451
CCNG2
LMBRD1
TTLL4
ZBED9
HSPB7
USP36
AP2A1
AFAP1
FUT8
SLC49A4
HSPBAP1
CEP78
MPO
GAS2L3
ATG9B
PDCD1LG2
MTR
TBC1D22A
WDR83
MAN2B1
UBXN4
FER
HMCN1
TBC1D24
CRYBA2
PPEF1
MAN1A1
PAPOLA
FGD4
CAMK2D
RASGRP2
DCTN1
NAPEPLD
DUSP3
PNKD
RAPGEF6
PPP2R3A
GET4
FAM169A
KLF6
CRY1
FOXJ3
GNAI1
P2RY6
ROPN1B
LAMP1
RTN2
GMEB1
ZNF221
MIEF2
IMPA1
FLII
ALPK3
PRRC2B
PODXL
SASH1
EPB41L1
FBXO5
EPCAM
TRIM34
CLN3
ADPRHL1
POLR1H
RILPL1
TBC1D15
LARS2
ERVW-1
CTH
UBE2V1
IL31RA
TMEM68
TGS1
EDEM2
IGFL2
ZFHX3
RESF1
MMP15
CLCN3
DNAJB2
SMPDL3A
SH2B2
RNF13
PSME1
TNIP3
EPHA4
BRI3
NMT1
DCAKD
ARHGEF2
PGC
SMC3
PTK2
ZNF566
ZNF292
SLC35E2A
AGXT
KLF7
P2RX7
LOC644090
ZNF263
RAB9B
NPPB
KLHL30
ETV6
SUN1
VTCN1
DDB2
DDX52
CWF19L1
CEP85
VIM
BMPR1A
NMI
FCSK
MAB21L4
NDUFA4
TMEM9
SRP68
NR1D2
SMIM6
MORC4
VNN2
SGK1
NANP
CGB2
RAD9A
KDM4C
LAPTM4A
ZNF845
WWC2
L1CAM
CSF2RB
PPFIBP2
TPD52L2
THAP1
KRT13
ZNF114
TBX3
SULT6B1
INO80
CEBPZOS
RFWD3
DACT2
ELMOD2
ZNF777
SPECC1
DHDDS
ALAD
CCDC88C
PINK1
NR2F2
PCGF6
FURIN
DAB2
AXDND1
BCAS3
TGM1
R3HCC1L
KRTAP2-2
EML5
GJA5
ART5
MAP11
ING2
GSTO1
PES1
MYBL2
ZNF318
RAPGEF2
POLR3B
GMFB
TRIP4
CAMLG
TPRA1
SPTBN4
PRR19
PPP1R12C
PAFAH1B3
BLVRB
TRIML2
PRIM2
CDKL1
PPP5D1
CALM3
GSTA3
UFD1
TMEM154
GPR1
CDC45
NEBL
HMGA1
ACOT2
LAPTM4B
SPAG17
FBXO32
DEAF1
WDR74
TMCO6
YEATS2
U2SURP
RXRA
ATF6
BCAR3
SDCBP2
RASGRF1
SOWAHB
RNF44
C4BPB
SYCE2
ACSL1
ZNF155
VTN
SUPV3L1
RGL1
RBM19
NUCB2
IAH1
SLC13A3
LNP1
ROPN1
KIF3A
GPRC5A
NT5C2
MXD3
EPS8
TMEM18
PLLP
TXNRD1
TNS1
OSBPL2
SOS2
NOCT
CCNP
SIRT4
TMIGD2
FBXW12
GAR1
PYROXD2
MRTFA
GXYLT1
H2BC21
H2AC21
H2AC20
NBN
MEF2D
SOCS2
SLC25A36
PLEC
FZR1
C1orf105
ADCK1
PIK3C2G
DUSP9
CLCC1
CAPN8
GTF2H4
ZNF587B
TMEM31
MRPL58
KLF5
FAM107B
TGM2
RNF144B
AXL
ZZZ3
NDUFB6
TNFSF12-TNFSF13
TNFSF12
TMC4
STX7
RPS6KA4
MFSD10
MED28
ZNF433
RPS27
PITRM1
HSH2D
CGB5
CD8A
STARD13
TOM1
RANBP3
IPMK
EVI5
CSNK1E
AP5B1
PRSS8
MGST3
USP2
NRBF2
RPN2
MROH8
LSR
TGIF1
RPL6
PTPN11
SGK3
ICA1L
DHX30
COQ2
OARD1
NFYA
RPF1
SEPTIN9
ACTR1B
MREG
ZBTB10
TKFC
TADA3
NR1H3
DENND2A
DDB1
ARPC4-TTLL3
ARPC4
QPRT
PARD6A
ACD
LPP
VPS35
TMEM144
ODAPH
GSTCD
DIAPH3
H2BC12
H2AC12
GPR146
RABEPK
NUDCD3
GLRB
CTR9
CELSR3
C12orf73
CALM2
ADNP
LRRC75A
ZBED5
SNRPC
RRBP1
PPP1R15A
FNTA
ERVFRD-1
AAAS
ZBTB4
POLR2A
TMED1
SULT2A1
RRM2B
NPTN
CLOCK
ZNF44
PIP4P1
KAT5
CBWD5
CBWD3
CBWD6
LUC7L2
GCN1
H2AC15
RAD50
ZNF14
UQCRC2
SYDE1
SLC28A3
PPAT
PLEKHF1
PALLD
PAICS
KIAA0100
FUT4
CALD1
BRMS1L
ADGRF5
PFDN4
ZNF750
STC2
PRAG1
EGLN2
CD164
RIOK2
ERCC6L2
TM2D1
TFPI
PLK3
GLTPD2
ATP5MF-PTCD1
ATP5MF
PTP4A1
RNPEP
PDSS2
MRPL55
MGRN1
LAMTOR1
ITPRIP
IRAK2
ILVBL
CNPPD1
SLC6A4
NAA38
CYB5D1
CRISPLD2
USP3
UNG
SYF2
NR6A1
KIAA0895
JAG1
ENPEP
EEA1
ANLN
NEU1
VAT1
SLC35D1
RGPD6
RGPD5
PEX11G
MARK4
GPR108
CEP120
ABCG1
HNF4G
SFR1
FLCN
EPB41L4B
COQ9
CIAPIN1
GPRC5C
RDH13
RAP1A
MCF2L
LARP1B
GTPBP1
FAM8A1
CTU1
CCPG1
CCDC57
C15orf65
CTDSP1
TCF25
NEK9
GCHFR
ADAM8
LOC112694756
SLC29A1
CCDC183
ANKRD36C
ZNF546
LTBR
KDM4A
DEXI
CEP112
ALG14
YJU2
TNFRSF19
PRSS22
ZFP36L1
YIPF3
POLR1C
LRRC56
CRKL
ZNF331
RPIA
CNN3
PDCL
TAX1BP3
SF3B5
SETX
RPAP3
RAP1B
MC1R
LRP10
KLHL9
IPO7
GATA6
EMC6
CBL
H2AX
SLC25A28
SLC25A11
SBF2
RNF167
PPARD
HMGB2
GABARAP
AP2A2
TNFAIP1
IFT20
DACT3
CFAP45
UPB1
TMEM62
PDZK1
IQCB1
IFRD1
EAF2
DUSP7
CPM
CHPT1
CCNG1
TMPRSS12
TBC1D9
SRP72
POLR1B
PIGO
HRH1
GRWD1
GPX1
CNP
CGB8
CENPA
ALDH3A2
TNKS2
SMPDL3B
WDSUB1
PRRT1
PPT2
NMRAL1
HMOX2
HCFC2
GRAMD2B
GLT8D2
CCN2
ALOXE3
WWP2
SIK3
RALGAPA2
LRPAP1
HPS5
GTF2H1
DCBLD1
COG7
FUS
UNKL
ZSCAN4
TASP1
SUMF1
STK19
SET
NCAPD2
MRPL51
MRPL45
MPC2
GRK6
FBXO11
DXO
DCAF6
TMEM267
ZNF513
TAP1
RBM15
PSMB9
PAK1IP1
OTUB1
NINJ1
LTBP1
GCC1
FDX1
CRIP1
CENPH
C6orf52
YTHDF2
ZNF181
KPNA4
BAG6
ATG2A
PRDX3
ABLIM1
RNH1
ERVV-2
CD99
VLDLR
RHEBL1
PRKACA
N4BP2
LRCH4
FAM53A
CDC42BPB
TUT1
SRSF1
RPUSD4
PTCHD4
PDXK
MGAT5B
LNPEP
LAD1
FAM118B
DOHH
RAB30
ZNF611
RNASEH2B
PPIL1
MRPL54
KLC2
CLDN14
ATF3
APBA3
SLC44A2
PYM1
LHX2
KIF17
FDPS
ERICH1
BBC3
PDXDC1
VPS45
SSR3
SREK1IP1
SPNS1
SLC22A11
RMND5B
PIGV
PGM1
OS9
DGLUCY
CWC27
ABCF1
NCLN
FAM104A
DIMT1
ARL17B
ARL17A
ABCF3
ZSCAN21
ZDHHC17
TJP2
SHB
RCAN1
ECT2
ALX1
ARHGAP27
TSNAXIP1
SLC39A6
RBM4B
RANBP10
PSMD5
DCAF5
BCL6
AGPAT1
NFX1
SMDT1
SLC1A5
RIOK3
RFFL
EFNA4
COTL1
C6orf132
ZNF219
TRIM56
NUTM2G
DPAGT1
CLTB
LGALS8
TNFRSF10B
ST7
PIP5K1A
MAPRE2
HTRA2
DNAJB5
CRYGC
SLC41A3
BZW2
RUVBL1
ZNF585B
TIAM1
PDE4DIP
FBXO4
DAG1
C21orf91
ATP5MG
CCDC130
TESK1
ST7L
SLX4IP
SLC39A13
NOL8
HPS6
CNKSR1
CENPP
CDK16
CBFA2T2
CAPZA1
CRISP1
VWA5A
USP40
PRXL2A
PPP6R1
PHF5A
DNAJC15
DDX50
ACO2
BTRC
SIGIRR
SUGT1
PIGA
PGAM1
IFI30
DNAJA2
MYL6B
ZNF823
RAD51D
ARRB2
AP1B1
FBXL18
MRPS18C
HELQ
SBNO1
RPS19
RNF207
RAD51B
LAMB2
CDC20
FAM162B
ZNF428
HNRNPD
G6PC3
FCHO2
C20orf141
DYSF
TMPRSS9
NUTM2F
MAP7
GOLGA4