ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478468 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◣ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

WDR74
SIRT4
H2BC5
APPBP2
RGS22
PSMD6
H1-2
PFDN4
POLG2
H2BC11
H2AC11
C12orf57
FKBP4
TRIM37
STX16
NRAS
H4C8
SCRIB
H2BC4
H2AC6
NPAS4
H3C15
H3C14
H2AC19
H2AC18
BCAS3
NCOA3
PPM1D
H2BC21
H2AC21
H2AC20
TUBD1
RPS6KB1
PARD6B
H4C5
ARFGEF2
CLTC
CALM1
VPS26C
RBL2
USP32
POLR2J3
TEX14
RAD51C
MAZ
H3C13
H2BC18
EIF2D
PRUNE1
MINDY1
THOC6
HCFC1R1
BRIP1
DHX40
RNFT1
SIX2
H2AX
ENTPD5
BBOF1
SMARCD2
TPM1
TRMT12
FBP1
SLC45A4
MAN2C1
ZMYND8
AKAP1
SPATC1L
GREB1
SLC25A24
H3C7
HTR5A
H4C15
H4C14
AMZ2
EIF1
ABCA5
CDH18
LLGL2
TTLL3
FAM53C
CDC25C
IMPDH2
RBBP5
SYCE2
C1QTNF6
HEXIM1
CSDE1
EHMT1
RAE1
WBP1L
ISG20
INTS2
DPP8
COIL
ABCA3
PIK3R3
MICU2
PTPN1
RTEL1
SCAMP3
ARL6IP1
NOL11
TRIM33
HNRNPH1
MPND
SLC44A1
C6orf226
EXOSC6
SPTSSB
HIPK1
MRPS23
VEZF1
NSG2
H2AC16
H1-5
BCAS2
FAM227B
DTWD1
THAP5
DNAJB9
ARID4A
FBRS
POLD1
RNF114
ARNT
SRSF7
TEX22
RPL12
PPFIA4
LRSAM1
MPV17
FIS1
ZNF217
HEXA
SLC16A6
LAMC1
ARSG
ATP5F1E
CPLX2
AKAP8
PDXDC1
USP8
ATXN7
SETD5
POLDIP3
NELFCD
SNAPC5
CYB561
UBQLN1
COQ7
FUT8
EPN1
DCLRE1B
AP4B1
EBAG9
TFF1
ATXN7L2
WDR6
TMEM223
SRSF2
PRMT6
MFSD11
KMT5B
FAM133B
CRBN
PRKRIP1
H4-16
FUT11
BCAS4
TIPARP
NAA60
SLC25A19
IRF9
ARAP1
ARIH1
PRKAR1A
FNIP2
SRSF5
DENND2C
SLC24A1
PRMT2
INTS14
ADNP
MYL6
PHAX
ZC3H10
CHMP4A
PA2G4
LINGO1
ANKRD13D
POR
RPLP0
MTHFS
GID8
DPY19L3
DPM2
DIDO1
NXF1
METTL2A
UTP18
MBTD1
P4HA1
CYB5R4
TUFT1
YJU2
USP42
HECTD1
BSCL2
GTF2IRD2B
PIK3C2B
MAP3K3
DMRT2
SENP8
MYO9A
BANP
MEMO1
ZC3H14
TRIM25
CYTH2
ZC3H6
VCPKMT
TRIM44
C1orf56
TDRKH
NBN
H2BC12
H2AC12
NUCKS1
CSKMT
C11orf98
FAM220A
TBX2
PPIC
SLC44A2
KLHL12
STRADA
ZER1
HIGD2B
BBS4
TACO1
EDC4
DDX42
CCDC47
C3orf14
TDRD7
H4C4
ERAP1
CDK11A
TOMM40
KRTCAP3
HBQ1
ESYT2
C16orf95
L3HYPDH
JKAMP
LRRC37A3
GATD3B
GATD3A
SRCAP
LOC730183
ADPGK
TP53BP2
PPP1R3D
FAM217B
DHPS
LRCH3
TRIP4
PSMC5
FTSJ3
PSMB4
ZCWPW1
MEPCE
OTUD7B
GALK1
CCDC59
THOC3
RAD23A
PHC3
THOC7
SH2B1
MVK
PPP6R3
XKR7
NDUFS3
KBTBD4
SLC35C2
NOTCH2NLA
VMP1
PTRH2
NME1-NME2
NME1
RBM48
PEX1
SEMA4B
FBXW9
LYRM1
MRPL21
IGHMBP2
RCCD1
PCTP
KLHL20
DCUN1D3
MRPS28
RINT1
MAPK1IP1L
PPM1E
NGRN
KCTD3
C12orf66
PFKFB3
CYB561D1
TRNT1
TMEM186
PMM2
IDI1
CNBP
CUL7
ST20-MTHFS
PWP2
LOC102724159
ERCC6L2
TCAF2
RPP25
MPPE1
LMAN2
SMG8
PRMT5
MED13
CYP1B1
ZNF43
DYRK1B
ALDOA
WWOX
MAN1B1
CACYBP
C2orf42
DSTYK
TSEN54
DPY19L4
CASKIN2
LEKR1
RIPK1
NPDC1
TPD52L2
SSR3
STAT1
GSK3B
MAPK6
SEC22B
MDM4
IQSEC3
IER5
PAIP2
OSBPL2
BNIP1
AOPEP
KMT2E
PSMG1
RNF7
CLPB
PTP4A1
H4C11
DDX59
TMEM191B
PEX2
YWHAZ
WDR4
CYP51A1
RGS9
MEF2A
MRPS18C
HELQ
MSL2
NAPEPLD
TMEM168
SEC13
EIF4A3
PPDPF
ZNF768
BCAS1
SYT1
MRPL10
LRRC46
MTRNR2L8
RNF43
NIPSNAP1
HSD17B4
MTRNR2L2
CCDC141
TMEM52B
ITGAM
ANKRD23
CRPPA
RABGGTB
KRTAP3-1
MIS12
DERL2
SLC10A6
ENTPD1
ATP2B1
COLEC12
PKIB
ANKRD1
SLC7A6
LNX1
SH3BP4
DLG2
OLFML1
PRKCZ
SH3YL1
EID2
SLC7A7
FGD3
SH2D4A
TRPM6
ZNF749
TMEM245
CCR5
ZNF343
LSM14A
NR4A1
BABAM1
CLCN4
POU5F1
PLAAT5
ZNF641
C6orf163
INSL4
ERP27
SLC7A9
P2RX6
RGPD2
RGPD1
LHX8
CCNL1
GABRR3
ADGRF4
IQGAP2
BIN1
STS
TTLL7
LSMEM1
FAM110A
ITGB6
RASSF2
FREM2
SNX27
TACC2
ABCB8
CTNNAL1
SRI
KDM5C
SLC25A34
PIP4P2
KRT8
MPP4
LGR5
UIMC1
FUT3
DEPP1
HOATZ
BTG4
PLD5
LHX4
SUPT7L
SLC4A1AP
GALNT11
ORAI3
ANXA3
NANOGNB
SCNN1A
RHOH
HSD17B1
IGFL4
BRD4
DAW1
SLC7A2
NPL
SLC25A26
GRHL3
SEH1L
TNFAIP8
SMARCA2
ACOT2
TRIM22
CDC14B
TTLL4
MAGI1
DLC1
FERMT1
NRBP1
AMOTL2
EXPH5
TNIP3
LRRC14B
FMN1
ZFPM1
RFLNA
DNMT3A
PPARG
CSGALNACT1
SLC4A8
GALNT6
DNAJB2
APBB1IP
PCCB
PIK3C2A
MTUS1
ARHGAP45
SHROOM3
KIFC3
ALDH3B2
NCOA1
ADGRG1
FGFRL1
PTPRD
TLK1
SMIM6
DOT1L
KMT5C
PICALM
CS
SULT1A4
SULT1A3
POLR1H
ZNF76
SPR
LACTBL1
EHBP1
CALHM4
DUSP21
SCAMP4
ADAT3
DENND6A
MID1
MTRNR2L9
ZNF444
TNFAIP3
CCDC88C
TRIM45
LIMA1
SLC39A1
MICB
FOXJ3
C9orf131
C11orf94
PARP4
HERC4
FBL
NRK
ULK2
TLE3
BAIAP2
ALDH4A1
NKIRAS1
PPFIBP2
TREML1
CSF1R
TMPRSS11F
RNF19A
NEURL3
HDAC5
EPS8
MORC4
TMCO6
EHMT2
C2
EDNRB
PDCD1LG2
ZMYND11
HSPB7
TENM3
PPP2R3A
RIOX1
PEX3
OARD1
NFYA
ADAT2
KRT71
ANXA6
CDS1
KIAA1586
TNRC6A
GOLGA8B
FAM107B
SLC12A6
S100A16
H2AC15
ZNF552
TRIM16L
PIK3C2G
IGFL2
AGAP3
ZBTB4
POLR2A
NFX1
BATF
AP5B1
NEBL
SASH1
PGC
GRAMD1B
SYTL5
ING2
LATS1
SEPSECS
GSTO1
CYS1
ZNF331
IFT43
TFDP2
ADAP1
PRDX3
MPO
PPEF1
KLF7
USP36
VNN2
SPECC1L
NSFL1C
ISM2
ZNF335
MYO18A
SPINK4
RPF1
C1QBP
MBOAT2
SLC6A4
LAPTM4B
SLC4A7
ADIPOR1
RFWD3
PLAGL1
MKRN2OS
KLF6
WDR87
SIPA1L3
MAN1A1
FLOT1
ARHGDIB
ZBED9
TIGD2
RANBP2
NHSL1
KYAT1
HK1
SGK1
PLS1
IL22RA2
CRISP1
BEST3
CWF19L1
ATP1A1
ZNF337
SMC3
OR2B11
JUN
ZNF451
MEF2D
PAPOLA
ALPK3
PPP1R9A
CRY1
GSTA4
UBE2V1
HTRA4
PLXNB2
CHD3
LMO7
TMPPE
MAB21L4
GLB1
CEP85
LOC112694756
CD59
BCAR3
PINK1
DACT2
RHOB
NDUFA4
FAM83A
TXNRD1
SPHK1
USP11
GPRC5A
TNS1
TMEM9
HMCN1
MPP1
GNAI1
CBWD5
CBWD3
ARHGEF3
PTN
DUSP3
PNKD
YEATS2
TNFAIP1
IFT20
HSPA9
EPHA4
RAPGEF6
PES1
MYLK3
SDCBP2
IL31RA
FOCAD
ZFHX3
RTN2
RPIA
RIOK2
MTR
SEPTIN9
PALM3
UCKL1
LDAH
GMEB1
EPB41L1
PARP2
P2RY6
H1-3
PPP5D1
CALM3
VIM
RILPL1
FBXL18
EIF3D
P2RX7
PTK2
CCNG2
ROPN1B
RPN2
NEU1
MROH8
TMEM68
TGS1
TRIM34
SLC13A3
GJA5
U2SURP
MYBL2
LNP1
TBC1D15
PRORP
PPP2R3C
PDGFB
CLOCK
LAPTM4A
DUSP9
CALM2
THAP1
LOC644090
LPP
ACSL1
YTHDF2
TGM2
TBC1D22A
LARS2
PRSS8
ARNTL
SUN1
VTCN1
SRP68
MACC1
DDB2
SPAG17
RNF144B
CLCC1
TMIGD2
NAA38
LSR
GPRC5C
CYB5D1
CTDSP1
SLC29A1
CBWD6
AXL
SLFN12
HNF4G
EDEM2
TMEM211
BLCAP
NANP
ART5
TNKS2
ABLIM1
RXRA
GSTA3
RASGRF1
PLEKHG2
FBXW12
TNFRSF19
FBXO32
BMPR1A
TMEM267
RAD9A
RAB30
H2BC15
GPR146
RP1
KRT13
RNPEP
OSGIN2
ACTR1B
BRI3
ZZZ3
TGM1
NR1D2
NMI
NDUFB6
LGALS8
ZNF155
RBBP8NL
WT1
TRIML2
TLN1
RAD50
CREB3
GAR1
PCYT2
ELMOD2
DACT3
AKR1E2
CRISPLD2
AMD1
MTARC1
LATS2
CAPN8
STARD13
RBM45
GTF2H4
CRYGC
DDX41
TGIF1
ZNF799
TNFSF12-TNFSF13
TNFSF12
PRSS22
CCDC183
ANKRD36C
RIMKLB
GRHL2
MGST3
FUS
TRIB1
P4HB
CFAP45
MREG
CKB
BRD3
TMPRSS13
SMPDL3B
VPS45
TRIQK
RFESD
CNN3
RPL6
PTPN11
PDCL
SF3B4
SLC41A3
HSF1
BOP1
FSCN1
CYSLTR2
LRRC75A
KIAA0319
DTD2
STK11IP
YIPF6
C11orf95
ASAP1
MRPS24
GLDN
CYP3A43
CHRNB1
BTRC
USP2
MYL6B
DGKD
CCNI2
SIGIRR
LMBRD1
GNA12
AP2A1
AFAP1
FAM162B
SLC49A4
HSPBAP1
DYSF
CEP78
GAS2L3
ATG9B
WDR83
MAN2B1
C1QTNF9
AMOT
UBXN4
FER
ANK3
PPP6R2
PPP4R3A
UNKL
TBC1D24
CRYBA2
POLB
FGD4
CAMK2D
TMPRSS4
RASGRP2
MICOS10-NBL1
MICOS10
DCTN1
BZW2
SPATA2
GET4
FAM169A
TBL1XR1
SKA2
PRR11
LAMP1
ZNF221
MIEF2
IMPA1
FLII
PRRC2B
PODXL
CASP9
TTC6
FOXA1
FBXO5
EPCAM
DUS3L
CREM
CLN3
ADPRHL1
ERVW-1
CTH
TBL1X
RESF1
MMP15
DGAT1
CLCN3
SMPDL3A
SH2B2
RNF13
PSME1
ARHGAP27
NMT1
DCAKD
ARHGEF2
ZNF566
ZNF292
SLC37A4
SLC35E2A
RUVBL1
CD68
ANP32E
AGXT
ZNF263
RAB9B
NPPB
KLHL30
ETV6
DDX52
TFRC
FCSK
BMP4
TAGLN2
VGLL1
WSB1
CGB2
KDM4C
DPP4
CCDC130
ZNF845
WWC2
RNF223
PNMA1
L1CAM
CSF2RB
ZNF114
TBX3
SULT6B1
PHLDA1
INO80
CEBPZOS
ATG14
ZNF777
STAU1
SPECC1
DHDDS
ALAD
PPIA
NR2F2
SSTR5
PCGF6
FURIN
ESYT3