ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10921876 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◣ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

FAM227B
DTWD1
PSMD6
SPPL2A
BCAS3
AP4E1
NPAS4
TRIM37
ARFGEF2
TMOD3
FAM214A
POLR2J3
HEATR6
USP32
LYSMD2
TEX14
RAD51C
UNG
BRIP1
FBXO32
USP8
C8orf33
ARPP19
MYO5C
TRIP13
BRD9
CRBN
PFDN4
TRPM7
ZNF217
PARD6B
GABPB1
APPBP2
PPM1D
HTR5A
XKR7
CPLX2
MAPK6
SLC12A9
CEP55
SGO1
FANCD2
KIFC1
MYO5A
NEIL3
SLC27A2
FAM72C
IMP4
CCDC115
TSR3
GNPTG
NTAQ1
SRGAP2
FAM72A
VPS50
HEPACAM2
IQSEC3
PIGX
CEP19
TUBD1
RPS6KB1
DCLRE1B
AP4B1
SENP5
IQGAP3
WIPI1
OAZ3
MRPL9
SUMF1
SKA3
MRPL57
BCAS4
KLHDC4
TONSL
RRP15
DYNLRB2
CPEB4
LEO1
C12orf66
SRGAP2C
FAM72B
ZNF212
CCNA2
DMXL2
TMOD2
STX16
SKA1
WASHC5
NSMCE2
ATXN7
ARHGEF5
METTL1
EEF1AKMT3
FBXW9
NAGPA
HIPK1
BUB1
UTP20
WDR53
FBXO45
SRGAP2B
FAM72D
DEPDC1B
MCM7
AP4M1
HAGH
FAHD1
KIF14
PLK1
SLC25A40
DBF4
TMEM199
POLDIP2
TACO1
TMEM41A
KIF18B
RFC3
RBM48
PEX1
AURKB
MCM10
EIF2D
SNAP25
NUB1
ATAD2
BARHL1
XRCC2
UBE3B
TMEM183A
UBE2C
WDR62
THAP8
RNF166
CTU2
GTF2H3
EIF2B1
THOC3
TRIAP1
TICRR
DSCC1
CCND3
HSF1
BOP1
HES1
RAD18
SPNS1
PGBD5
RABL2A
PARPBP
NUP37
NOTCH2NLA
CPSF1
ZNF282
PLCG1
CCDC59
WDR74
NCOA3
MYL12B
VARS1
NCAPH
POLQ
RPLP1
TECPR1
PKMYT1
TRMT61A
ADAT1
MYBL2
ZNF3
METTL2A
MIS18A
COMMD4
QSOX2
UGGT1
WDR81
RNASEH2A
PREX1
RRP1B
HSF2BP
GNB5
TDRD7
GTSE1
TRIM33
BCAS1
ZNF688
POLR3H
TMEM203
NDOR1
PCLO
P2RY2
PPIL1
SAP30BP
RECQL5
DPY19L4
GPR89A
MSH3
DHFR
RANGAP1
ZFPL1
CDCA5
PRCP
DDIAS
URB1
AGFG2
KPNA2
NRAS
SHCBP1
ZNF778
PC
POLR2J
VPS11
SMG8
BLM
SVOP
PPAN-P2RY11
PPAN
NHP2
LAMP1
NUP107
SPC25
SRI
BIRC5
TBRG4
AARS2
RECQL4
LRRC14
DZIP3
CIP2A
RAD54B
PCOTH
MIPEP
BMP7
SMYD5
ESCO2
GTPBP10
C8orf76
TBX2
ZNF783
VIRMA
ATP13A3
NUF2
ZSCAN25
SIKE1
NEURL2
CTSA
SPATA33
LRWD1
ALKBH4
KRR1
CENPA
NDUFAB1
ACSF3
NOL8
CENPP
CENPM
EEF1E1
DSTYK
FAM83D
RINT1
TOMM22
SNAPC5
CENPH
TPH2
TPX2
PAK2
FANCI
FBXL13
ARMC10
ZAR1L
BRCA2
ABCF1
GPR89B
PCCB
MON1A
RBSN
CDT1
ADIPOR1
SENP2
WDR4
DIAPH3
CKAP2L
HCFC2
GLT8D2
SF3B4
EMC3
TRMT1
IPO11
NCBP2AS2
NCBP2
CBLL1
CENPBD1
SEC13
CWF19L1
BCAS2
RAD51
FRAT2
TFRC
LIX1L
KDM5B
MRPL3
PLEKHM3
TCF19
CCHCR1
NOM1
POLR2K
LSMEM1
BNIP1
TSPAN10
NPLOC4
SLX1B
SLX1A
BOLA2B
BOLA2
NOC4L
DDX51
SLC7A5
CLCN7
N4BP3
CFAP69
DHX40
SNRPD1
IFRD1
MPHOSPH6
ECT2
RBM28
PUS7
RBM8A
H3C15
H3C14
MBTPS1
DUS2
DDX28
TPRA1
ZEB1
MCM2
ATXN1L
TSPAN19
LRRIQ1
LAD1
LOC101928764
XRN2
HSDL1
DNAAF1
TIPARP
CFDP1
TBC1D31
PNPLA8
HROB
MSTO1
NET1
FAM222A
RCE1
PSMD4
TRAIP
DNAJC30
BUD23
LRRC37A3
UNC50
COA5
SH3BP5
POC5
MRPL21
IGHMBP2
INPP5K
MTMR12
KIAA0895
ANLN
NOTCH2NLC
CCDC150
RUBCN
TMEM168
FYTTD1
EXOSC5
BCKDHA
ZHX1-C8orf76
ZHX1
MRPS21
TERF2IP
KARS1
SYT5
VGLL4
NDUFV1
METTL18
C1orf112
NBPF11
ASF1B
RNF115
POLR3C
TCTEX1D2
GINS2
RAD54L
PIGU
GCDH
VRK1
TMED5
CCDC18
PABPC1
ERAL1
ZNF595
WASHC2C
MRPL27
EME1
MRPS14
GTF2IRD2B
VPS33A
ASNS
WDHD1
SOCS4
C7orf50
GRWD1
RNF40
CCDC189
TRIP4
CHD1L
DTX2
PRKAB2
UNKL
PDE4DIP
GET3
SSNA1
ANAPC2
GPAM
ZNF706
KLF10
SYPL1
RRP12
MND1
RAB37
GEMIN4
DYNC2I1
CDK1
NBN
SMPD4
MZT2B
CRNKL1
CFAP61
DLGAP5
INKA2
DDX20
COPS7B
TMEM150A
EIF3E
BRMS1
TMEM120B
MCM3
ZFYVE21
XRCC3
KAT2B
LONP1
CATSPERD
MDM4
SSR3
RNF13
NDUFAF6
CCNE2
DDX11
MRPS35
MKS1
CRY2
C17orf97
BCAR1
UTP15
ANKRA2
MIS12
DERL2
VWA8
EIF3C
EIF3CL
TAMM41
ISY1-RAB43
ISY1
PHAX
TRUB2
COQ4
PBK
TRMT61B
NAGK
STIL
MAPK8IP2
WDR83
WDR83OS
BOLA2-SMG1P6
PGAM5
GTF2H4
KAT8
CCNB2
ECSIT
RAD9A
MZT2A
LRRC58
THOC7
E2F1
ATG14
EMC8
COX4I1
RPL39L
POLR3F
DZANK1
TMEM258
FEN1
SNRPE
PELP1
DEPTOR
DUSP23
PAM16
CAPN7
ADAM22
MAD2L1
ATR
IQCG
CNPY3
LMLN
DUS4L-BCAP29
DUS4L
COG5
ZMAT3
CEBPZ
RAB22A
VHL
DCXR
LMTK2
FAM185A
FRAT1
SLC25A26
HEATR5B
GPATCH11
PHTF1
ASCC2
PSMG2
CEP76
SPDL1
PRPF40B
PSME3
NDUFS7
TRNT1
YIPF4
SLC52A2
FBXL6
UFSP1
ERN1
GLI4
ATAD5
NKIRAS1
NR1D2
PGS1
TMEM44
CLPTM1L
BOLA3
PDE4C
ZMYND8
OVOL2
HEXA
MARCHF8
GTPBP4
C12orf45
EIF3H
SLC35A4
APBB3
GINS1
CLNS1A
U2SURP
ATP5MF-PTCD1
ATP5MF
NMD3
ACAP2
RTF2
RIOK3
DNAJC9
MRPS36
NOMO3
NOMO2
EZH2
TRIB1
APPL2
RRM2
PWP1
GLRX2
LNPK
TIFA
FA2H
RABL2B
NUFIP1
GPALPP1
CKMT1B
TSEN15
VPS9D1
KDELR2
B4GALT7
BOLA1
POLR1F
PARL
RABIF
RMI2
ZNF316
SHC1
CKS1B
RHBDD2
SEC22B
COQ2
EXOSC6
NUDT4
POLA1
TADA2B
CCDC96
TDRKH
ZHX3
NBPF15
POLR1H
GDAP1
SART1
NAXE
SGO2
TFPT
PRPF31
ZNF771
GOSR2
SH3BGR
LCA5L
ZSCAN2
STOML1
ARMC8
CYB561
SYTL2
NOP16
HIGD2A
TSFM
MRPL4
RPSA
APH1A
ATG7
GDI2
PRMT6
POLE2
RBM19
NEK2
C5orf51
DLD
NR3C1
PHF5A
ACO2
RNASEH2C
SQLE
ZER1
ZDHHC6
VTI1A
NARF
GSTO2
DGAT1
NLE1
ATP6V1C1
SF3A1
CCDC157
TAF5
ZFAND2A
PDIA4
FBXO5
MRM3
GLOD4
H4C15
H4C14
HASPIN
PIMREG
MIS18BP1
EIF3F
NAMPT
PHLPP2
FDX2
METTL2B
TOM1
C2CD5
ZNF84
ELAC2
MRPL2
KLC4
TEDC2
TATDN2
FANCM
BRIX1
LMAN2
PRPF18
PMPCB
ANKRD46
WDR36
VPS35
NAA25
XPC
LSM3
CD55
TATDN1
NDUFB9
UMPS
TP53RK
CRY1
ANKRD54
TRAM2
LRATD2
SUGP2
ARMC6
OPA1
PFAS
INTS8
NOL12
PMPCA
ENTR1
VGF
WIPI2
FBXL18
LRCH4
FBXO24
CHRNA5
SLC29A1
C16orf46
STAT1
HNRNPH1
NOL11
EXOSC9
AP3B2
MTBP
MRPL13
ROMO1
NFS1
ESYT2
EPG5
FAM91A1
PPP1R15B
CCNB1
KIF20A
BRD8
RTKN2
MCM5
CELF1
NELFB
ARRDC2
PTPMT1
MAFA
NUDT15
PEPD
KLHL20
PPP1R16A
PLSCR4
TROAP
TSEN2
KLHL12
SFSWAP
VPS29
RAD9B
ZNF451
UBXN7
ERO1A
CDYL
CKS2
RRM2B
TBK1
MYL12A
EIF4ENIF1
NAPEPLD
CEP135
ASPM
GATB
WDR43
USP30
TMEM242
NDUFS3
KBTBD4
CLCC1
DNAJC2
RNFT1
COMMD2
RPTOR
FAM24B
SLC25A25
NAIF1
MRPS34
EME2
ADPRS
DDX46
ZNF398
SNRPC
PRPF19
GTF3C3
RNF168
UBFD1
EARS2
EIF1AD
BANF1
PPIB
UBE2N
CCZ1
WASHC2A
UFD1
CDC45
SSBP1
USP20
C9orf78
CDIPT
ZNHIT1
PLOD3
DMTF1
DEK
CIART
PRELID3A
ZFP36L2
DPH1
CYB561D1
LSM5
RUVBL1
ZNF23
EEFSEC
NUP160
NXT1
SCLT1
C4orf33
COPS6
RMND5B
TPD52
RIOK1
CAGE1
ESPL1
TBL3
TBC1D15
NDC80
METTL4
PPP1R12B
VPS41
ELP5
CTDNEP1
ZC3H13
INPP4A
TTF2
DHODH
PARG
RXYLT1
STX6
RGL1
ARL8B
SLC25A24
XPO4
PSMG3
EDC3
TMEM186
PMM2
DYRK1B
NCAPG
ZC3HC1
SGTB
NLN
BMT2
CEP78
RELB
ARRB1
DCAF4
DDX49
COPE
TMEM231
REXO5
ERI2
CDK5RAP1
EBAG9
ABCC10
NIT2
SERPINB6
NME1-NME2
NME1
RAD51AP1
C12orf4
SLC39A6
TOP1MT
CCDC97
MRPL42
RIPK2
PRR14L
ELAPOR2
KNOP1
PMS2
AIMP2
DIMT1
NUP35
STX18
DDX41
HSPA5
SNRNP200
PYCR3
RAD50
DPH7
IWS1
POLR2D
CYREN
DNAJB6
PDHA1
IGSF3
CDC6
RMDN1
ANKRD36
SMG5
ARHGAP19
RNF19A
GCN1
TP53INP1
CPNE3
KMT2A
VAC14
AEN
RRP1
ADPGK
PRKAR1B
SLC35F5
CKMT1A
PUF60
STARD7
MDM1
NT5DC3
AMDHD2
SPG7
C10orf95
TLCD5
EXO1
SPC24
CFAP54
CHFR
NOTCH2NLB
DDX59
PIK3C2B
JRK
YWHAH
KCTD9
CDCA2
CENPN
PDXDC1
STYXL1
ATG101
IDH3B
ZFP1
YBEY
MCM3AP
SAP130
ACTR5
FAHD2A
FOSL1
ZNF395
NOL6
MRPS23
TSN
COMMD1
COPS3
THUMPD3
CCT4
MKRN2
RPS6KB2
ZFYVE26
RFNG
GPS1
KIF23
GBA
ANKRD42
EXOC2
WDR25
WARS1
RALBP1
FBXO25
FAN1
GMFB
POU2F1
ZNF331
ZNF530
SERP1
EIF2A
FAM161B
COQ6
FAM133B
MRPS11
MRPL46
NDUFV3
TBC1D22A
GADD45GIP1
SLC39A13
ARHGEF26
TCOF1
RABGEF1
ABCF2
PSMC5
FTSJ3
NOMO1
VPS8
PCYT1A
TBC1D23
DNM1L
CCNT2
RBX1
TUBGCP6
E2F7
FAM168B
DENND2C
MYO1B
CDC25A
TAF4B
GLRX5
LSG1
NOC3L
IST1
WDR70
HAUS7