ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424141 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◣ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

ZMPSTE24
NDUFS7
UTP20
NPAS4
QTRT1
UBE2L3
NUP214
YJU2
RBM19
TRMT1
RRP15
HTR5A
USP35
KCTD21
KLHL18
KIF9
WASHC2C
PRAME
METTL1
EEF1AKMT3
FAM72C
VARS1
STAT6
CASC3
WDR4
NME1-NME2
NME1
SPATC1L
POLR3D
GBA
PPIL2
PSME3
POLR2J3
CRNKL1
CFAP61
GRWD1
NLE1
URB1
OSCAR
NDUFA3
UTP25
CCDC86
UFD1
CDC45
LARS2
MRPL27
EME1
CYP4F11
USP2
GNL2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
EIF2D
C16orf46
DDX21
C16orf71
ANKS3
AJUBA
SCFD2
PAXBP1
SSBP1
HSP90AB1
CMIP
SLC12A9
FANCD2
MIS18A
LTV1
WDR46
PFDN6
FABP6
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
EXO1
NUP155
RAB11A
ZNF335
ATXN7L2
MTFR2
LZTR1
POLR3E
EBNA1BP2
CFAP57
GPATCH4
SRGAP2
FAM72A
DPP9
PDE4A
CCT2
RRP12
POC5
DNAJB12
BRD7
TRUB2
COQ4
TOP3B
CYB561D1
RPSA
TRIP13
BRD9
NUF2
ABCF1
CRKL
ARCN1
TTC27
MRPL40
HIRA
SRGAP2B
FAM72D
TMEM248
SLC38A7
MRTO4
EMC1
UBFD1
EARS2
PIGU
SELENOH
ZCCHC24
CDC6
P2RX6
DHX37
DPH2
ADPRS
NDUFA2
IK
GAL3ST4
WDR74
FBXL13
ARMC10
VPS37D
GTF3C4
DDX31
AP5Z1
KLF16
SNRPE
UNG
SUMF1
DUS3L
RAD54L
IQGAP3
VPS33A
CDK7
ZNF202
SMAP2
WASHC2A
SHCBP1
MDN1
CFAP410
CFAP299
TRMT2A
RANBP1
SRGAP2C
FAM72B
ZNF593
C1orf232
CCNB1
TBRG4
SEC13
ZNF598
MCM7
AP4M1
LUC7L2
THAP7
FMC1-LUC7L2
FMC1
NBPF1
LOC389831
PUS1
LRRC59
SMN2
SMN1
TKT
ZNF839
PGBD5
AKR1A1
ATP6V0E2
IREB2
SMYD5
PPAN-P2RY11
PPAN
C8orf37
ZNF74
CLTCL1
KCNK5
RABL2B
NEURL2
CTSA
SLC29A3
RPP40
SF3A3
HCFC2
GLT8D2
COMMD4
HPCA
ACOT7
YIF1A
RBM28
TWNK
MRPL43
GPATCH3
TRIP4
ULK4
TTC26
VPS50
HEPACAM2
ARFGEF2
AARSD1
PRMT1
PSMD9
HPD
NOC4L
DDX51
RPS26
SZT2
MED8
SPCS1
GLT8D1
NMNAT1
LZIC
KCTD9
CDCA2
LAMP1
SHF
TBX1
TMEM208
LRRC29
PEPD
FZD1
C12orf66
YIPF3
POLR1C
ACTR6
FBXW8
PLK3
GTF2H2C
GTF2H2
SLC27A4
TROAP
CRCP
NOM1
BCAR3
EDC3
QTRT2
CCDC191
RRM2
CYB5R4
PAQR4
PAXX
GAGE2C
GAGE2B
GAGE2A
ZFPL1
CDCA5
NEIL3
SUPV3L1
ZGRF1
LARP7
PRMT5
TMEM191B
ATP6V0D1
IQSEC3
ZNF771
EIF2B3
CZIB
TBCD
PI16
NOL8
CENPP
HAGH
FAHD1
TRMO
DCXR
PMS2
AIMP2
PNO1
ESPL1
AURKB
WFDC3
DNTTIP1
RBM34
SUPT7L
SLC4A1AP
RFX1
GTF2H4
NAGPA
DLGAP5
ZSWIM8
STX18
RAD9A
C12orf43
INO80B
DHDDS
TBL3
MRPS28
NOS3
MARCHF2
DHX40
GSN
RAB14
RPUSD4
FAM118B
GOSR2
USP36
GATB
POMZP3
BAG6
KAT5
FPGS
ATP5MC2
POLG
COASY
ATG14
ZBTB17
ATAD3B
SPNS1
TRIAP1
SUGP2
ARMC6
MPHOSPH10
MCEE
CNOT4
CENPH
METTL26
TADA2B
CCDC96
GTF2H2C_2
SLC19A1
TNPO3
TRAPPC9
TRIM44
SWSAP1
CENPS-CORT
CENPS
INO80
TOMM22
MED20
BYSL
MRPL45
GTF2H3
EIF2B1
TOMM40
TIMM44
CCNG2
NOP16
HIGD2A
CFAP298-TCP10L
CFAP298
BLOC1S1
GFM1
HSPA9
RPIA
PARG
CCNC
STAM2
STX6
RNF121
LOC100133315
CLPB
SACM1L
RPS2
DBF4B
PSMC5
FTSJ3
ARPC3
HPS4
SRRD
NOC2L
DPH1
MRPS15
SNRPD2
QPCTL
FAM86B1
GCDH
TFB2M
CNST
SRD5A1
EIF1AD
BANF1
ZBTB45
RPL5
ZNF391
RBBP5
KIF2C
KTI12
MED15
SLC25A12
SPINK4
GAGE8
GAGE2E
GAGE2D
GAGE13
PINX1
BMS1
DDX41
CBLL1
DMAC2
UBE2I
LZTFL1
ZNF778
RRS1
TRAIP
CTU1
CEP85L
RNF166
CTU2
HSPBP1
CCDC97
PSMA1
KLHDC4
PAK1IP1
C6orf52
SH3BGR
LCA5L
HSPA6
KCNH2
SGO1
CEP135
ZNF529
EXOC2
GSTA4
LDLRAP1
FANCI
TTK
PRKAR1B
SLC3A2
XRCC2
KNOP1
DDX49
COPE
MRPS23
AGFG2
CCDC77
TMEM242
KDM5A
DSTYK
GFI1B
TSC1
MAK
RPS8
RABEP2
NEU1
SFSWAP
UTP3
PTMS
MRPL1
ALG1
NADK
MDGA1
POU2F1
PPIH
ZNF408
ARHGAP1
N6AMT1
ANP32E
TSC22D4
ZCWPW2
AZI2
RIMBP3C
RIMBP3B
SNX29
RAD51
MAD2L1
ACOX3
TSFM
AP3S2
SLC24A1
INTS14
CYRIB
NEK2
VTA1
NMBR
THADA
TFPT
PRPF31
MITD1
PAK4
ECE1
PDE4C
PTGS1
FDX2
NTMT1
ZNHIT6
CCDC113
TELO2
KIF20A
BRD8
UBXN11
TAF13
DDX42
CCDC47
NDUFS3
KBTBD4
LRRC37A3
RPL23A
AMPD2
GNAT2
VAC14
ZSCAN22
TTC4
DLAT
PLEKHG2
HEXA
RRP1
TTC16
PTRH1
PSMD14
ANKRD36
RPL37
UBR3
TPP1
FOXD2
ZBTB9
TRIT1
HACL1
BTD
LGR6
BUB1B
POLR1B
MCM10
SLC25A26
BARHL1
SF3B5
ZNF165
RSRC1
ZC3HC1
RABGAP1
DGCR8
WASF2
IPO4
EIF3C
EIF3CL
NOL10
OGDH
ECSIT
PDAP1
BUD31
RPL32
SRPRB
MVK
ZSWIM9
LIG1
PHB2
MYBBP1A
NOL6
TTF2
MCOLN1
IARS1
SMG7
NR1H3
ACP2
HNRNPH3
PBLD
RNF40
CCDC189
KNL1
YARS1
S100PBP
ATP6V1H
IFT172
SMTN
XAB2
ZSCAN21
NDUFAF6
CCNE2
C5orf51
RNMT
FAM210A
MEA1
KLHDC3
DOHH
EEF2KMT
ZSCAN30
SPOCD1
SPRYD4
LONP1
CATSPERD
RBM42
ANAPC10
ABCE1
RPS29
FAF1
CSNK1G1
SLC25A46
ATAD3A
EIF3E
SPATA2
MRPS17
CKMT1B
C17orf75
PHF19
MYL6
NOL7
RBM48
PEX1
TMEM9B
CTNNB1
PITHD1
PRPF40A
ARL6IP6
RPS3A
DDX11
RPGR
ISOC2
DHCR7
TADA3
ARPC4-TTLL3
ARPC4
ZNF485
EXOSC5
BCKDHA
INTS7
DTL
MRM1
SETD6
TOP3A
SMCR8
MAPK1
PPP6R3
ETS2
BTN3A1
SYNJ1
SSNA1
ANAPC2
NOTCH2NLA
ZWINT
TIMM17A
RPS27
CNOT6
HMGB1
SLC25A51
KRIT1
ANKIB1
CHMP7
PPT2
CHST12
POTEF
AKR1C2
KIF18B
BBS5
CCDC24
NUDT1
MRM2
MED23
MRPL24
RER1
MORN1
RPL38
C19orf53
RTL10
GNB1L
RPL34
GAMT
HEATR1
CDK1
PLK4
CCDC146
AP3D1
CACTIN
IPO13
KIF23
RPS19
CCDC34
SLC33A1
DRG2
NDUFAB1
STT3B
HMGCR
CIZ1
HDAC1
RIMBP3
RAPGEF2
CCNA2
RABL2A
WDR62
THAP8
ITGB3BP
EFCAB7
EFTUD2
CCDC103
SLC35E1
ZSCAN25
PRRC2B
GPN2
EPOP
SPACA6
TPM4
MOK
POLQ
WDR36
CDC37
FAM207A
MOB3A
IZUMO4
KDM3A
BICD2
SLC44A1
ERBB3
FBXO5
IPO11
NSUN5
CALM2
PRDX1
SNRPF
RPS5
AURKAIP1
MST1
SP8
TRMT6
MCM8
TMEM199
POLDIP2
GTPBP10
NOB1
RABEPK
TOMM6
LSM2
CATSPERG
MAD2L2
DR1
SLC35E2A
KIF15
KIAA1143
LYRM4
FARS2
SNRPD1
LTN1
ING5
SNRNP200
FANCF
NDUFB2
FNTB
UBL5
PPP1R13L
POLR1G
H6PD
ILF2
SDF2L1
ZNF561
FBXW9
XKR7
LSM5
PPT1
ASB8
MRPL42
TTC21B
CCZ1
EML2
ODF2
NPC1
ZNF487
KDM1A
TSSK6
NDUFA13
STT3A
FOXS1
SKA3
MRPL57
MARCHF8
AXDND1
MAN1B1
PTCD2
MRPS27
CPPED1
OVCA2
CDK5RAP1
DDX46
MRNIP
MTX1
THBS3
UCKL1
GP1BB
DNAJC25-GNG10
DNAJC25
RBKS
BABAM2
RAD51AP1
C12orf4
P4HA1
UBE2G2
NSA2
GFM2
FLAD1
EEF1D
TIGD5
PRMT3
DCAF10
RCCD1
PPP2R5A
DGCR6L
SERINC4
HYPK
GTPBP3
FAM13A
NUDT15
DCAF4
ENDOV
WDR3
GDAP2
DNAJC30
BUD23
RAB5B
LAMTOR3
MRPL55
SNAP29
PI4KA
TFB1M
PHACTR4
MCTS1
TJP3
UBE2Q1
SLC39A11
EXOSC3
FBXW2
TMEM203
NDOR1
H3C2
MARCHF7
DNAJC28
ISG20
TFIP11
CBWD5
RTF2
TAF4B
NUP35
CBWD3
CBWD6
MECR
DPP3
SEC22B
RBSN
BOD1
LOC100287896
LIPT2
MAPK8IP3
TTC21A
GORASP1
IKZF4
PLIN3
ANXA2
TSN
XPO5
POLH
MCRS1
SNRNP70
PSMB7
SIRT4
SNIP1
BRK1
PPIF
METTL14
HMGN4
MEPCE
TTI2
ZCWPW1
TMEM186
PMM2
MRPL4
PCNP
KLHL20
TPR
ODR4
TIPRL
CFAP36
TBCK
AIMP1
C9orf16
CACNB3
VWA7
WASHC5
NSMCE2
GTPBP4
TXNL4A
RBFA
ZSCAN2
ADSL
ACBD3
SLC35A2
PKD1
MRI1
LTA4H
DUS2
DDX28
ADK
PC
AP3M1
DUT
SKAP2
MEIS1
PWP1
ATAD2
L1CAM
ADCK1
PLEKHM3
HARS2
HARS1
DHX34
MRPS18C
HELQ
H4C8
SUPT6H
SDF2
MTBP
MRPL13
SLC25A53
IMP4
CCDC115
BRCA1
KLHL12
CEP162
PES1
RACGAP1
LRRC57
HAUS2
LRIG2
ZRANB2
MAK16
POLR3F
DZANK1
RFC3
NTAQ1
LAMTOR5
B3GNTL1
NECAP2
MTIF2
RINT1
GTF3C5
UBOX5
FASTKD5
CCDC174
FAM3C
SLC35E2B
ZDHHC12
BLM
ITFG2
RRP9
PARP3
COG2
B3GAT3
TACO1
VPS26B
NCAPD3
DERL3
FIGNL1
INO80C
STX2
NRROS
AEN
INKA2
DDX20
DPY19L4
RPS27L
HNRNPH1
CNTRL
ZPR1
C5
SETD1A
KDM4A
PAFAH2
CSDE1
RPL7A
MED22
RAC1
CDC25A
MFSD1
SF3A1
CCDC157
THOC1
USP14
ZNF292
CLN6
ADPRHL1
EEF1E1
CFDP1
TMEM222
FAM86B2
ZCCHC7
PRKAR1A
MRPL10
LRRC46
ANKRD36C
TTC31
CCDC142
TAF1C
ACIN1
GRPEL2
CCSER2
SNRPB
RPS3
HDDC2
ZNF280A
OIP5
NUSAP1