ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089495 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX20532172: hESC H1

◢ SRX20532173: hESC H1

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◣ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
TUBD1
RPS6KB1
TRIM37
NPAS4
PFDN4
BRIP1
USP32
ARFGEF2
APPBP2
IQGAP3
ZNF217
TEX14
RAD51C
SKA3
MRPL57
SLC12A9
RNFT1
PARD6B
PPM1D
DZIP3
CIP2A
SIKE1
IQSEC3
HIPK1
BCAS4
DHX40
C3orf14
C12orf66
UNG
CREBRF
NCOA3
FAM72C
SGO1
SRGAP2
FAM72A
TSR3
GNPTG
ZFPL1
CDCA5
METTL1
EEF1AKMT3
DYNLRB2
CRBN
FBXO32
NCAPH
RNF166
CTU2
ZNF331
FANCI
CPLX2
SRGAP2C
FAM72B
TICRR
SRGAP2B
FAM72D
RAB22A
MOK
BARHL1
HTR5A
BLM
DSCC1
DYNC2I1
ATP6V1C1
ATXN7
CEP128
MED20
BYSL
MYBL2
ZHX3
HSF1
BOP1
UBE2C
SCRT1
TRIM33
NAGPA
KPNA2
XKR7
CIT
MTFR2
MIS18A
TTK
NET1
SAP30BP
RECQL5
UTP20
TROAP
VAC14
ZSCAN2
TRIP13
BRD9
TTLL11
VARS1
RRP15
MCM7
AP4M1
RMDN1
CPNE3
CCNA2
CCT2
SPNS1
NCAPG
MCM10
TONSL
POLQ
TOP1MT
WDR4
EXO1
PGBD5
EIF2D
KIF14
SMG8
USP14
ZFYVE1
TRMT61A
VRK1
GFPT1
FANCD2
POLR2J3
DCLRE1B
AP4B1
CCNG2
NEIL3
NOL8
CENPP
RACGAP1
TTF2
XRCC2
WASHC5
NSMCE2
DHX37
SNAP25
ZNF688
SKA2
PRR11
RNF40
CCDC189
PRELID3B
RAD51
CSTF1
AURKA
BUB1
YPEL2
FAM227B
DTWD1
STOML1
TBX2
SUMF1
MFSD1
LTV1
SGO2
DDX11
FBXO5
WASHC2A
KLHDC4
MOCS3
DPM1
BCAS1
SMYD5
OAZ3
MRPL9
BIRC5
RRP12
RPP40
PTRHD1
CENPO
CYB561
TEDC2
BMP7
NUP214
NEURL2
CTSA
ZNF530
MDM1
KCNH6
APH1A
GRWD1
LIX1L
CCNB1
WDR3
GDAP2
TAF5
ATP1A1
IPO4
GTSE1
NOL6
ATG101
DNAJA3
INTS2
COG7
PDSS1
NOMO3
NOMO2
DUS2
DDX28
PHTF1
POC5
DOP1A
DEPDC1B
TSEN2
CKAP2L
NOM1
RECQL4
LRRC14
MRPS23
RAD54B
TBC1D30
GNS
UTP23
RUVBL1
AP4E1
PMS2
AIMP2
FAM174A
ADCK1
CYC1
TADA3
ARPC4-TTLL3
ARPC4
HMGB1
RABL2A
RTF2
ABCA5
SCFD2
PRMT6
ATAD2
REXO4
CENPA
NOTCH2
TRPM7
NUF2
GTF2H3
EIF2B1
DLGAP5
CCT5
ATPSCKMT
TMEM208
LRRC29
GGH
SRPRB
RAD18
RFC3
NEMP1
ZBTB9
SPG7
THOC7
UTP4
DERPC
CHTF8
GPR89A
PTPN1
ATP5F1E
GCDH
NOL10
ESPL1
RAD54L
CDC14B
MAD2L1
STAT1
ZNF367
NTAQ1
TCF19
CCHCR1
MED13
CCDC146
PIF1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TFB2M
CNST
EIF3C
EIF3CL
FAM13B
SHC1
CKS1B
DCAF4
SMC2
NME1-NME2
NME1
NAGK
EEF2K
TMEM186
PMM2
TBC1D31
OXR1
KCNMB4
ZAR1L
BRCA2
VPS50
HEPACAM2
PUS7
SLC52A2
FBXL6
HEATR5B
GPATCH11
LSS
SLF2
CNPY3
FAM207A
PLCG1
MLYCD
PHLPP2
TTC27
CLTC
CHUK
HAUS7
SQLE
METTL2A
RINT1
KLF10
UBR5
EDC3
KAT2B
SLC25A19
CPSF1
ERN1
ESD
MYO5C
FBXW8
ASB8
PPP1R16A
DLD
PRKAB1
NBPF12
CCDC137
PRMT2
GTPBP4
FIS1
KMT5A
SPEF2
PARG
HSPA5
NOP16
HIGD2A
CDK1
MFSD14B
KCND3
CDK7
WDR46
PFDN6
STYXL1
FANCC
CDC25A
PIGU
SYT5
C7orf26
ALAD
ANKRD28
STK36
RNF25
ARHGEF5
CCDC86
ATG16L1
NCKAP5L
MDM4
LSM14B
ZNF680
OVOL2
RHEBL1
LRFN4
WASHC4
RRP1
MYBL1
VPS13B
ARFGAP1
IDH3A
AP3B2
ZC3H3
TERF2
RRM2
KIF18B
MND1
PSMD12
POLR2K
USP10
DDX21
DNAH7
PSMB7
RABGAP1L
ZNF789
TAF13
NUP107
RNMT
FAM210A
ZNF212
TIMELESS
PSMA5
PPM1E
C6orf89
SRD5A1
TBC1D13
L1CAM
RSPH1
METTL3
NUDT1
MRM2
IFT88
RFC1
ZEB1
NBPF1
SLC25A26
IMP4
CCDC115
PPIL1
KIF11
TM2D3
MYL12B
ANKRD46
SPTLC1
SLC25A32
DCAF13
TAMM41
LMTK2
PYCR3
PIP4P2
C16orf46
C8orf33
DUS4L-BCAP29
DUS4L
COG5
MBTD1
UTP18
CACYBP
GALK1
WDR74
LOC101928764
CENPN
MRPL4
BICDL1
FANCA
DPH7
CSDE1
CDT1
CREBBP
URB1
PRCP
DDIAS
HEATR5A
ASCC3
USP15
CKAP5
KCTD13
STK3
CENPW
XRN2
ZSWIM9
LIG1
AOPEP
SEC61B
ALG2
RBM8A
PCNX3
GPATCH4
HCFC2
GLT8D2
SFSWAP
IFRD1
GABARAPL2
HMGCS1
SMIM5
FAM214A
GPR89B
WDR77
ATP5PB
SCRN3
CIR1
CNPY2
VAMP3
XPO4
POLG2
RAD9A
PRPF3
G2E3
ROPN1L
RTKN2
ZNF706
CCNB1IP1
SYK
C16orf71
ANKS3
ACOX3
NDUFAF6
CCNE2
CYB561D1
RBM28
TSFM
GOLGA3
EIF3E
PAM16
ZNF16
KNOP1
DNA2
CLCC1
TMOD3
CDK5RAP2
KIFC1
PLK1
GOLIM4
SLC25A40
DBF4
LRRC37A3
RFWD3
VIRMA
SPTLC2
ZNF778
EXOC2
POLR3F
DZANK1
SPC25
SH3BGR
LCA5L
CCDC150
TMEM120B
OTULIN
NBPF11
NOMO1
MTMR14
RUBCN
CDKL1
NUDT2
KIF24
PUS1
INKA2
DDX20
RXYLT1
GOSR2
DYNC1I2
TACO1
CS
ECT2
CDC25B
MYNN
ZER1
VAPB
VANGL1
CRNKL1
CFAP61
TRUB2
COQ4
LARP4
CKS2
WDR61
BRMS1
SERINC3
RAE1
NAF1
ARRDC4
MNAT1
CHRNB2
HELZ
ETS2
PBK
WDR62
THAP8
GPAM
MFN1
DEPDC1
VCPKMT
PRPF18
STX4
ARPP19
KIAA1841
PREX1
MRC2
TBRG4
PARPBP
NUP37
C12orf45
EIF1AD
BANF1
MAPK8IP3
DENND2C
MTRNR2L8
CEP55
PLEKHM3
FANCE
CDC20
SHQ1
HSDL1
DNAAF1
MSH3
DHFR
TTLL5
ERG28
YIPF4
GNPNAT1
STRIP1
HARBI1
ATG13
YTHDF1
C2orf50
PPM1H
ZNF492
THOC3
NAA25
TMEM183A
UMPS
PDE4DIP
CPLANE1
RIOK1
CAGE1
NHP2
TASP1
OTUD6B
CENPBD1
C8orf76
PPRC1
STAM2
ADAT1
SLC35C2
TCOF1
MARS1
ARHGAP9
TMEM258
FEN1
EIF2B2
RPS29
IQCG
RSL1D1
LMLN
MAX
NDUFB2
LRR1
ATXN1L
RPS23
ATP6AP1L
CLBA1
NAP1L1
TRIM45
ATG14
ARMC2
NGRN
MLEC
SEC22A
IFT22
RASA2
LDLRAD3
REXO5
ERI2
NCBP2AS2
NCBP2
LTO1
TBC1D15
PRKAR1A
FRAT1
ATP5MG
VPS33B
DEK
SLC27A3
KIF2C
PPP2R3B
ADPRS
PDCD2L
C20orf27
SPAG1
ANGEL1
CBLL1
DGKZ
KLHL18
KIF9
FANCM
GLE1
ZNF696
RIDA
POP1
AZIN1
CEP112
SHCBP1
RBM48
PEX1
COX10
PIP4K2C
POLR2J2
ZGPAT
ARFRP1
TMEM251
MOAP1
BRPF1
SLC45A3
NARS2
GMCL1
DPY19L4
GNAI3
LACTB
ENDOV
NRAS
CDK5RAP1
NOL11
RAB35
POLN
HAUS3
TRAP1
NEPRO
WDR47
CTTN
KIAA0895
ANLN
DDX19A
CLSPN
AGFG2
PDXDC1
STX16
UBE2G2
RRM2B
MBTPS1
ZNHIT1
PLOD3
GOLGA5
RMI2
FBXO33
IVNS1ABP
CAPZA2
KLHL36
SLC35D2
MRPL44
THUMPD3
FUBP3
DECR1
CGRRF1
CPOX
SLC12A7
SKIV2L
NELFE
TRAIP
URM1
CYP51A1
TEX10
E2F4
SLC35A2
ZNF330
ORAI2
RCN2
SLC27A2
DPH1
HM13
TOMM40
FITM2
SLC35A3
CDK5RAP3
SAXO2
EFL1
SPICE1
RRP1B
HSF2BP
KATNIP
GTF3C1
HSPA12A
ENO4
RASA4
SULF2
ZNF229
EML1
RHNO1
FOXM1
YIF1A
SND1
MRPS21
SSBP2
ADAR
C14orf28
MIGA2
NTSR2
NPM1
SNAPC5
TCTN2
ZNF107
HERC4
MIIP
CHFR
SUB1
GPATCH2L
AUH
SPATA17
GPATCH2
DDX42
CCDC47
AXDND1
RCCD1
TFRC
PPP1R12B
UCKL1
PCYT1A
RPS6KB2
PCLO
HEXA
GATB
TXNL4A
RBFA
FAM234A
CDIPT
PSMD2
CNPPD1
SBNO1
RETREG2
GKAP1
ARL6
DYRK1B
MRPL3
STX6
FAM117B
SEC22B
COQ2
SF3B4
ZFAND3
PUF60
PIP4P1
CCND3
KBTBD8
VTI1B
SLC25A24
METTL17
TEX2
PEX16
SLC9A8
FAM210B
OCIAD2
HEATR1
CFDP1
RAB5B
INCENP
FAM228B
SF3B6
CDC42SE1
MLLT11
NBEAL1
WDSUB1
WASHC2C
PLK4
ASPM
TADA2B
CCDC96
RTTN
IFT57
TMEM150A
POLR2J
TDRKH
EDC4
SENP5
RASA1
KIFAP3
KIF6
CCNB2
NDUFS3
KBTBD4
MON1A
SYS1
GSPT1
CHCHD3
RBM42
HGH1
THAP10
LRRC49
SETDB1
FAM219A
DNAI1
NELFB
LRP10
GPAA1
RPGR
MRPL10
LRRC46
RNF19A
NPHP3
PRKCA
C5orf51
MPHOSPH10
MCEE
QSOX2
MXD1
RPS27L
CHCHD6
RNF115
POLR3C
SART1
TCP11L2
GARS1
U2SURP
RPUSD1
CHTF18
USP8
MMS22L
LYSMD2
PXK
TTC26
ANKRD42
EBAG9
PABPC1
VPS53
LOC389831
MED9
METTL6
EAF1
STRADA
ESRRA
CUL2
CHURC1-FNTB
CHURC1
CLIP1
SLC22A15
NOTCH2NLA
EIPR1
C11orf24
CLPTM1L
SUSD6
SNRPE
RPIA
EEF1E1
ZNF408
ARHGAP1
TAF3
POLE3
C9orf43
SPATA2
NAA35
FIGNL1
SPOP
POFUT2
GOLGB1
NELFCD
SUMO3
ABL2
UBXN11
SDAD1
RPF2
SLC35F5
ZNHIT6
CCDC90B
NSFL1C
DNAAF2
PSMC5
FTSJ3
KIF3B
RPL36AL
MGAT2
EMC8
COX4I1
TAF6L
HINT1
GPSM2
VWA3B
SLC25A25
NAIF1
ERAL1
TPX2
SLC35B1
TF
PPP1R13L
POLR1G
TOPBP1
C10orf143
FAM185A
ARL13B
PPP4R3A
PTCD1
CPSF4
ESR2
TRAPPC10
PMEL
CDK2
CPQ
GLDN
ZNF79
MCM3
ZNF383
CHID1
PPM1G
SPATA2L
TRIM14
COPG1
ODF2
WIPI1
IARS1
PNPLA8
PELP1
ZC3H18
DNAJC2
DRG2
PLEC
PXMP2
POLE
TMEM214
SMARCD1
POLE2
TRMT6
MCM8
ACTR6
DDX49
COPE
FDX2
MMUT
CENPQ
THAP5
DNAJB9
CMSS1
FAAP24