ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089503 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◣ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
DYNLRB2
PSMD6
SLC12A9
PFDN4
TUBD1
RPS6KB1
NPAS4
TRIM37
BRIP1
USP32
PARD6B
FBXO32
TEX14
RAD51C
APPBP2
IQGAP3
ARFGEF2
WASHC5
NSMCE2
ZNF217
METTL1
EEF1AKMT3
BCAS4
SCRT1
SIKE1
DHX40
MOK
C16orf71
ANKS3
HTR5A
IPO4
ZFYVE1
FANCD2
NCOA3
HIPK1
XKR7
PPM1D
C12orf66
RNFT1
KAT2B
C3orf14
ATXN7
CREBRF
CCNG2
BARHL1
YPEL2
GTF2H3
EIF2B1
WDR4
ZSCAN2
MAX
CDC14B
RSPH1
SPTLC1
KLHDC4
UTP20
HSF1
BOP1
UNG
SUMF1
TRIM33
CPLX2
MCM7
AP4M1
AGFG2
DYNC2I1
C16orf46
HSDL1
DNAAF1
NTAQ1
IQSEC3
TSR3
GNPTG
METTL3
CCNA2
FBXO5
BIRC5
PPP1R16A
NAA25
RNF40
CCDC189
ARMC2
ATP6V1C1
NDUFV1
KCNH6
SAP30BP
RECQL5
MED6
TBX2
CYB561D1
ATG14
RNF114
SLC52A2
FBXL6
CCDC86
TRMT61A
RABL2B
TTC27
FAM214A
ATXN1L
ATG101
CRBN
PPM1E
SLC45A3
NRAS
L1CAM
RABL2A
C6orf89
CHFR
MBTPS1
RRP1
ROPN1L
POLR2J3
RAE1
RNF166
CTU2
ZNF331
GABARAPL2
MCM10
VPS50
HEPACAM2
THOC7
EDC3
FANCI
SMIM5
APH1A
TMOD3
DHX37
HEATR5B
GPATCH11
EIF3C
EIF3CL
RAD54B
MTFR2
QSOX2
NDUFAF6
CCNE2
DOP1A
HCFC2
GLT8D2
SERINC3
NUDT1
MRM2
TROAP
ENDOV
MOCS3
DPM1
ARFGAP1
PHTF1
HELZ
TRIP13
BRD9
TARS3
TTF2
DCLRE1B
AP4B1
DNAL1
ZNF696
OAZ3
MRPL9
TACO1
WDR37
GFM1
RACGAP1
METTL2A
MTMR14
RRP15
TMEM208
LRRC29
BICDL1
CYB561
TTLL11
DEPDC1B
KAT7
CCT2
SGO1
ZNF778
GTPBP10
RMI2
NET1
CFDP1
SPATA33
DYRK1B
DCAF4
FBXO33
SMYD5
FAM72C
RPP40
LOC101928764
MFSD1
CNPY3
TWNK
MRPL43
TOP1MT
METTL17
USP49
FBXL13
ARMC10
PGBD5
SMG8
BCAS2
DENND2C
RHEBL1
MDM1
RRP12
INKA2
DDX20
MRPL21
IGHMBP2
GFPT1
SLC25A19
GNAI3
KIF14
TMEM67
NBPF1
WDR61
ZHX1-C8orf76
ZHX1
RMDN1
KMT5A
CPNE3
ATP5MF-PTCD1
ATP5MF
NCAPH
NAGPA
AP3B2
ESPL1
TTLL5
ERG28
ATG7
ARRDC4
SRGAP2
FAM72A
CSTF1
AURKA
IFT22
SKIV2L
NELFE
SQLE
CLBA1
ACTR6
DLGAP5
SH3BGR
LCA5L
MYL12B
LIX1L
NEMP1
IFT172
TAF1C
NAA35
SKA3
MRPL57
WIPI1
MRPS21
CYP46A1
NME1-NME2
NME1
RTF2
LSG1
MAPK8IP3
RRM2
POLQ
STYXL1
SPC25
DSCC1
RIDA
POP1
BMP7
NOTCH2NLC
LRPPRC
POLR2J2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
KNOP1
RAB22A
VCPKMT
GRWD1
SRPRB
DUS2
DDX28
ANGEL1
GRB2
CKAP2L
WDR46
PFDN6
RBM48
PEX1
SLC25A44
MAPK8IP2
AP4E1
NUF2
GFOD2
TM2D3
CCDC146
TRIM45
THADA
NHP2
NOL8
CENPP
FAM207A
SLC25A24
DNAH7
ZNF408
ARHGAP1
GPN1
CCDC121
IDH3A
FAAP24
CEP89
ABCA5
VANGL1
WASHC2A
FAM174A
AOPEP
RNASEH1
WDR25
WARS1
PUF60
TPTE
POLR2J
TMED8
SAMD15
AUH
DDX49
COPE
FAM227B
DTWD1
DDX42
CCDC47
TBC1D30
GNS
TMEM186
PMM2
SLC35A2
LYSMD2
COG7
C12orf45
ZC3H18
CDC37
ADCK1
IFT88
SAXO2
EFL1
FBXW9
FIS1
PRPF18
C20orf27
KLF10
GPR146
HRH3
FCF1
AREL1
CACNG4
URB1
ZFPL1
CDCA5
LZTFL1
PDXDC1
ZHX3
SURF2
SURF1
QTRT1
ASNS
TMEM231
TMEM150A
RFC2
NUP214
SPG7
ORAI2
XRCC2
TTK
ATR
CEP55
TSEN2
SEC13
SRGAP2C
FAM72B
NOL6
NLE1
SARS1
SF3B2
C11orf49
CSDE1
WIPI2
CRELD1
RINT1
PLEKHM3
TDRD7
CLTC
GOLGA3
TBC1D15
CENPBD1
NOTCH2
ENTPD5
BBOF1
NUP107
TPRA1
WDR47
MCM2
CCT5
ATPSCKMT
TCF19
CCHCR1
COPS3
SPATA2
YIPF4
ACOX3
USP10
PREX1
FANK1
PYCR3
ATP6V0D1
GOLGA5
INTS8
METTL2B
PSMD12
PIP4P2
WASHC2C
DZIP3
CIP2A
WDR35
CASKIN2
TSEN54
RUVBL1
NBPF12
SPOP
VPS11
PRPF19
ZNF79
ZNHIT1
PLOD3
IPO11
TCTN2
DPY19L4
GPR89B
FANCE
ATP1A1
PLBD2
SYVN1
PRMT5
VAPB
CARD19
WDR43
PSMG4
TCTEX1D2
VPS33A
XRN2
CDIPT
COX19
CNOT4
FRAT1
ANKRD46
VARS1
PTPN1
WDR77
ATP5PB
TRMT44
YIF1A
WDR59
MKS1
TCP11L2
TMEM251
MOAP1
PI4KB
RAD18
TMEM18
YPEL3
TRMT61B
DIAPH3
UTP23
DUS4L-BCAP29
DUS4L
COG5
TF
PSMB7
TOPBP1
DCAF7
DENND4A
PHLPP2
COMMD9
GNA13
ALAD
NSUN5
PLCG1
CENPW
CENPN
SPTLC2
CLNS1A
CDT1
SKA2
PRR11
TBC1D13
PRKAB1
AP1G1
ZC3H3
GALK1
TTLL4
MTX1
THBS3
HNRNPH1
STOML1
CBLL1
TATDN1
NDUFB9
KLHL36
ZFAND2A
GABPB1
PDE4DIP
TP53INP1
SCFD2
FAM161B
COQ6
NCKAP5L
RASA4B
TADA2B
CCDC96
ECT2
TAF6L
GKAP1
E2F7
UBFD1
EARS2
HEATR1
HM13
POLR2K
PCYT1A
BLM
PPIL1
CEP128
INCENP
FAM183A
CDK7
MRPS23
HSPA5
TMEM120B
L2HGDH
DMAC2L
TRPM7
GOLPH3L
SLC22A15
TSFM
DDX41
SEC22B
USP54
LRWD1
ALKBH4
DENND4B
TUFT1
COMMD4
NOP9
DHRS1
NOMO3
NOMO2
CEP112
SLC4A8
NEURL2
CTSA
GTSE1
THAP10
LRRC49
PIAS3
SRGAP2B
FAM72D
DNAJC25-GNG10
DNAJC25
EIF2D
LMAN2
ITSN2
EEF1E1
SLC7A6OS
PRMT7
LTV1
SPPL2A
SPAG1
CIART
TTC26
MED20
BYSL
NUB1
PMEL
CDK2
METTL6
EAF1
PLEKHO1
MLEC
FAM185A
AJUBA
BMT2
NAGK
NKIRAS1
NR1D2
LACTB
IKZF5
ACADSB
DSTYK
NUP160
SEC22A
RMND5B
NUFIP1
GPALPP1
AHI1
FAHD2A
MRPL33
UBE2C
ZBTB9
ZNF76
ZMAT3
CPSF1
PDZD2
USP30
NOLC1
WDR26
SLC5A6
ATRAID
NOM1
TOMM70
LNP1
MARCHF10
AP5Z1
CCNDBP1
VMP1
PTRH2
PUS7
TOX4
RAB2B
ZFYVE26
LLGL2
KIFC1
KLHL32
NDUFAF4
TCOF1
RRM2B
ASB8
PIP4P1
MYG1
MTPN
LUZP6
MON2
RBM28
RABIF
POM121
TMOD2
USP2
DIMT1
CRCP
TOLLIP
CLCN7
RASA2
CFAP54
LAMTOR1
ZNF789
CAPZA2
RGL2
TMEM214
VAC14
SEL1L
GPR89A
NME2
MFN1
C12orf73
TECPR1
OSBPL8
RNF216
HAT1
MTIF2
INTS1
CHURC1-FNTB
CHURC1
MEA1
KLHDC3
MTHFD1L
TBK1
XPO4
ZFP41
RBM19
TAF13
TOP1
ZNRD2
LRP10
RFC3
KLHL12
RIOK3
VIRMA
PSRC1
SPEF1
GDPGP1
CIB1
DBR1
ELK4
DPY30
CCS
CCDC87
PPRC1
SSBP1
GTPBP4
EIF2S1
ATP6V1D
PIF1
ZNF706
NAPEPLD
GLMP
TAF5
MSH3
DHFR
CFAP69
WDR93
PEX11A
VAMP8
PPAN-P2RY11
PPAN
TRIAP1
MARCHF8
VPS53
USP14
ADAM17
IREB2
ZC3HC1
HSP90AA1
NEPRO
RCE1
WDR20
TPD52L2
RFX5
MMUT
CENPQ
PSMA5
URM1
SPOUT1
NOMO1
DPH7
PRR29
AXDND1
RFC5
SPICE1
NBPF11
CHID1
PRMT6
CNNM3
CCNB1
WFDC3
DNTTIP1
EBAG9
TTC23L
GMCL1
TMEM9B
CCDC34
KRIT1
ANKIB1
COQ2
ATP5MG
USP8
PAK2
ESD
MYO5C
CMBL
SKA1
AEN
KLHL24
RABGEF1
ZZEF1
CYB5D2
LSM14B
ZSCAN21
CALCOCO2
KIF6
NOL10
ATP5F1E
CCDC59
BRMS1
INIP
SLC25A13
HILPDA
SSR2
IARS1
MXD1
OS9
TDRKH
CYP51A1
RIPK2
BOLA1
PRKCI
CPEB4
LOC112694756
ZNF131
G2E3
MAPK6
STRADA
MAN2B2
DMXL2
C8orf33
ANKRD42
RNASEH2A
SAC3D1
NEK10
GPSM2
EFCAB12
OVOL2
TFPT
PRPF31
SSNA1
ANAPC2
TMEM203
NDOR1
VPS13B
MACROD1
PSMB4
GPATCH4
POLR1B
C5orf51
MFSD5
TMEM170A
EML1
PNO1
OXNAD1
DPH3
RECQL4
LRRC14
GLG1
ECHS1
BCAS1
KLF15
TIPARP
ADAT1
SLC35C2
NOB1
LRFN4
NBN
LSS
OTULIN
FSD1L
CSRNP2
ADIPOR1
SUMO1
CALB1
EBNA1BP2
CFAP57
KIAA1586
MED13
CUL2
BET1
LYRM4
FARS2
WDR81
FBXL3
KATNIP
GTF3C1
PRKAA1
NOTCH2NLA
EDC4
FAM13B
E2F4
H1-10
ZNF623
CRNKL1
CFAP61
CYB5R4
TICRR
MED23
SFSWAP
FPGS
PSMC3IP
CKAP5
ZGPAT
ARFRP1
SWI5
GOLGA2
ANXA4
MAP3K3
AKAP10
FEZ2
CDK9
UGGT1
FBXW8
ANAPC7
CALCOCO1
OTUD6B
C11orf24
ERN1
EXO1
POC5
WDR3
GDAP2
CHUK
NDUFB2
WDR70
SCO1
ADPRM
PCNX3
RABGGTA
ZGRF1
LARP7
QTRT2
CCDC191
ZBTB17
REXO4
FAM117B
CDK5RAP3
LOC100289561
CNPY2
NEK11
ASTE1
ZNF250
PLD3
C19orf47
OSGIN1
SGO2
NPM1
UBN2
PEPD
LTO1
C12orf43
MRNIP
TRAPPC2L
GALNS
OSGIN2
RAB1A
KLHL18
KIF9
RPIA
RPF2
HEATR5A
BBS1
RFWD3
RPAP3
SRRT
TRIM25
UBE2V1
KLHDC2
ATAD2
STX16
ZDHHC17
ZNF410
ARPC1B
SASH1
KIF20A
BRD8
HEXA
ZNF688
ZBTB49
LYAR
STAT1
SLC35B1
FAM133B
STX4
TBC1D23
WDR48
SCN11A
SPATA2L
AP1S1
ZNF229
RWDD1
SCAMP3
AP1M1
BIN3
HAUS5
SNAPC1
TMX1
SEC62
NUDT16L1
MLYCD
SAR1B
PRPF3
LEO1
OSTM1
SARNP
ORMDL2
CNOT2
FAM217B
PPP1R3D
TRIM56
RSL1D1
NARS2
ERCC4
POFUT2
ZEB1
EAPP
ATP6V0E1
TUT7
SPEF2
MICALL2
GPAM
NIFK
LIN9
TMEM167B
CIT
GPATCH2L
SPRYD7
FICD
LTN1
ATP6V0A2
TSEN15
CCP110
ITGB4
RXYLT1
CS