ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9187409 | MIA Paca-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◣ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

SNX16
NPAS4
HTR5A
TDRD7
CPLX2
CAMTA1
SLC39A3
NEK2
IQGAP3
TMCO3
DCUN1D2
COPS7B
IQSEC3
TRIP13
BRD9
GSN
RAB14
SLC35A4
APBB3
MAPK8IP2
MRPL44
XKR7
TMEM41A
PSEN2
POLR2J3
POLQ
SRRM3
WASHC2C
CYB5R4
PGBD5
MTRNR2L2
CCNG2
DDX11
B4GALT7
NUF2
CENPW
EXO1
TMEM242
THOC3
L1CAM
MTRNR2L8
CHGB
ZNF555
TRMT61B
SKA3
MRPL57
NUDT15
KIF18B
SCRT1
SHCBP1
NCAPH
FBXO5
SPNS1
PEX3
ADAT2
CCNB1
CCDC92B
MED23
RNF166
CTU2
RUVBL1
EEFSEC
CKAP2L
BIRC5
RHNO1
FOXM1
GTF3C3
BRIX1
RRP15
MRM3
GLOD4
CENPS-CORT
CENPS
ATG14
XRCC2
ANKHD1-EIF4EBP3
ANKHD1
SLF1
KIAA0825
C8orf33
SMC2
HEXA
NOL8
CENPP
KIAA0895
ANLN
BARHL1
NDUFS7
TTC26
ACBD6
DEPDC1
VRK1
OPA1
PBK
ESCO2
EIF2D
WDR36
NOTCH2NLC
RTTN
NAGPA
NLE1
SMG8
FANCD2
MCM10
STX18
ZNF558
H6PD
COMMD2
DUS2
DDX28
AGK
MAD2L1
POLR3H
STX16
DIAPH1
NEURL2
CTSA
CYP4F11
NSUN4
AURKB
CEP43
SKA1
MKI67
CCNA2
MRPS35
FAM72C
QTRT1
EDC3
NSA2
GFM2
NSFL1C
MTF2
ZNF778
PKD2L2
SGO1
METTL3
GTF2H2C
GTF2H2C_2
MRPL39
ZNF391
MRI1
RNF187
CPEB4
MRPS14
TTK
BBS5
TSR3
GNPTG
NBPF1
GBA
MCOLN1
PPIH
CWF19L1
WASHC2A
CEP55
OSCAR
NDUFA3
DNAJC25-GNG10
DNAJC25
CDKN2AIPNL
TIPARP
SF3A3
SRGAP2
FAM72A
TATDN3
NSL1
PGAM5
KIF20A
BRD8
HUS1
WASHC5
NSMCE2
ZNF688
C17orf75
PIK3CD
TRIAP1
SAR1B
NOTCH2NLB
SRGAP2C
FAM72B
CDK7
GTF2H2
FBRS
SEC24B
MRPS23
NDUFAF5
ESF1
ATF6
MIS18BP1
FAM207A
SZRD1
DDX18
PAXBP1
IFT46
SERPINB6
TFAP4
ADAMTS14
PARL
AARS2
SASS6
RRM2
MFAP3
FAM114A2
C5orf51
STX6
DRG2
HINT3
MIS18A
H4C15
H4C14
COMMD1
GGH
ASF1A
ZGRF1
LARP7
MRPL21
IGHMBP2
ZFYVE1
TF
TOPBP1
GPATCH1
RABL2A
CDC20
DTX2
SSBP1
VPS9D1
ATG5
SCNM1
LYSMD1
ATP6V1H
NMNAT1
LZIC
ISY1-RAB43
ISY1
ATP6V0D1
DCLRE1B
AP4B1
RAD51
OAZ3
MRPL9
FBXW8
TRIP4
TTLL4
ZNF77
SMARCD2
CCNB2
BUB1
SYNJ1
VPS50
HEPACAM2
PIMREG
STX7
UTP20
USP30
DDX46
SLC47A1
RAPGEF6
NOXA1
MTFR2
SMC4
IFT80
CCDC88A
CDC25A
C17orf49
URB2
TAF5L
POU2F1
DISP2
DNMT3A
NOM1
CENPH
ANKRD31
NME1-NME2
NME1
RBM45
BRF2
KIFC1
SLC35A3
APH1A
IDH3B
STIL
MRPS31
TTLL11
VPS35
ZSCAN22
DCAF10
SSNA1
ANAPC2
HES3
GTSE1
SRFBP1
TMEM171
HEATR1
CDC14B
YBEY
MCM3AP
ZNF410
SLC44A1
DLGAP5
SRGAP2B
FAM72D
NEIL3
CXCL5
ITGB3BP
EFCAB7
LRRC37A3
ALG10
SLX1B
SLX1A
BOLA2B
BOLA2
FANCI
BOLA2-SMG1P6
CFAP298-TCP10L
CFAP298
ARHGAP45
UTP25
ASPM
NEURL1B
NELFB
GAA
PPWD1
CENPK
MARCHF8
MRPL3
CREG1
SUPT7L
SLC4A1AP
MAP3K7
SELENOT
RBBP5
TBC1D19
TIMM17A
POLR3G
MBLAC2
NCBP3
ADAM15
PTK7
ANKRD13B
SECISBP2L
FAM111A
GNAL
SLC33A1
TOX4
RAB2B
PEPD
WDR53
FBXO45
KXD1
NOTCH2NLA
CASKIN2
TSEN54
ATAD5
RAD51AP1
C12orf4
NUP35
PFAS
NDUFA10
PRKCQ
KCTD18
RARS1
MPHOSPH10
MCEE
ZAR1L
BRCA2
TTC4
THAP10
LRRC49
DNAJC11
MACIR
PUS10
PEX13
FBXO4
SYT5
TCTN3
THEM4
TRMT1
TTF2
TXLNA
TAF3
FRA10AC1
TRMT61A
FXN
MRPL27
EME1
PLK1
LAMTOR5
DPYD
INTS12
GSTCD
MRPL40
HIRA
ZNF800
TRMT5
SLC38A6
NUP54
TBC1D13
GTF3C5
PPIA
CEP120
GFM1
MYBL2
ATP7B
ALG11
SDHAF3
LSM11
DBF4B
CENPF
NGDN
STX8
CFAP52
NOL10
ZSCAN25
CFAP299
HASPIN
NDUFS3
KBTBD4
BEND3
DZIP3
CIP2A
COMMD9
FAM174A
SLC25A46
BDP1
BNIP1
MED4
ZBTB17
KLHL20
VTA1
NMBR
LMAN2
NR6A1
NAE1
ACSF3
PCBD2
LGALS8
REXO4
SRSF11
LRRC40
CCDC91
IQGAP2
DYNC1I2
HNRNPH1
PLS1
ADPRS
FANCM
CREBL2
AP3B1
WTIP
PPP2R3B
TMED5
CCDC18
WDR27
C6orf120
CEP128
POLR2C
SNAP47
JMJD4
CYRIB
HMGB1
MXD1
HROB
TTC14
GLDN
HJURP
MTIF2
JUND
ZKSCAN4
KLHDC4
TMEM248
CRBN
GATAD2A
ASMTL
ANKRD12
ZNF680
H4C8
CCDC86
TTC27
SUMF1
DSTYK
IPO4
TMEM199
POLDIP2
YPEL2
U2SURP
STK10
ZMPSTE24
CDK1
KNL1
TSFM
MITD1
BDH1
TTPA
FAM161A
LAMP1
PSMF1
DUT
NOTCH2
ARMH4
SCFD2
LRRC59
ASNS
RBM42
LAMTOR3
HAUS5
ZFPL1
CDCA5
MSH3
DHFR
CPSF1
MNAT1
SNX10
DNER
SLC25A51
ASF1B
ASB6
NSG2
CMTR1
TRIM2
ZNF316
HAGH
FAHD1
POLR1F
COG2
RUBCN
FYTTD1
PHACTR2
BLM
AGBL3
KCTD9
CDCA2
DCP1A
ZNF783
COX16
RAD54B
METTL18
C1orf112
GEMIN7
TFPT
PRPF31
FITM2
KHK
UFD1
CDC45
VCPKMT
ZNF335
FAF1
BICDL1
UBOX5
FASTKD5
RPS20
SVOP
NDUFA9
AKAP3
SGSM1
LARS2
RING1
RAB3C
TCOF1
ZNF92
CALM1
WDR11
RNF6
HPCA
P2RY1
MCM7
AP4M1
RBKS
BABAM2
COMMD4
SOD2
EIF2B3
WTAP
ZBTB40
FRG1
C1orf109
CDCA8
DNA2
USP35
KCTD21
TMEM230
DARS2
CENPL
ZNF398
ZFP62
NAGK
ERLIN2
AMZ2
TEAD1
LSM5
ZNF23
SSBP2
HIBADH
OTUD7B
DDX19A
NET1
SMN2
SMN1
ZMAT3
ZC3HC1
TIMM22
GOT2
FAM133B
ZNF3
MRPS33
AGL
RAD54L2
RABL2B
DEPDC1B
JMJD1C
ZER1
ZNF234
SCRT2
ATR
CLTC
COX10
FIGNL1
P2RX5
PSMD9
HPD
NUDT1
MRM2
LIN9
CHERP
COA6
MIGA1
JADE1
PXK
YIPF3
POLR1C
NUDCD3
NFE2L2
RRP1B
HSF2BP
ZSCAN30
STAT3
QSOX2
ADCK1
RPGR
LARP1
TVP23B
SHQ1
CDC25C
DPY19L4
TMEM203
NDOR1
PRPF18
MAGOH
PLEKHM3
TSEN15
MAK16
PPIL4
KIF14
CHMP1B
CAST
SNX18
HRK
MLLT1
IPO11
KLHL12
TOMM6
DCP1B
DDHD2
FGFBP3
CHAF1A
KIF2C
DHX40
MIA3
DPY19L1
CRKL
FOXJ3
PSMB2
SRPRB
USPL1
CHD1L
H4C2
CAMSAP2
EDARADD
UBE2C
C6orf89
NAA20
SESN1
CEP57L1
SEC23A
ATE1
URB1
CDK5RAP1
SLC25A16
NAPA
RPS7
UHMK1
ADGRG6
DIAPH3
SNRPD1
NUP107
RAD9A
P4HA1
PEX12
ZCCHC4
ANTXR1
KANK4
HNRNPA1L2
PDLIM7
ANGPTL4
TMEM222
C18orf21
FAM98A
VPS72
OLFML2B
MRPS15
SMC6
GEN1
TMTC1
MMUT
CENPQ
HMMR
NUDCD2
CUL9
ZNF185
ZBTB7B
YARS1
S100PBP
RPS19
RRP8
ILK
CCDC97
DDX1
ITGB3
NKAP
TMEM132B
ZNF724
MAN1A2
TSN
EXOC2
WDR70
KANSL3
PARP1
ZWINT
SPIRE2
GPAT4
LRRC26
MND1
RIOK1
CAGE1
WDR55
CCNL1
EIF5B
TXNDC9
TRUB2
COQ4
SURF6
ZNF131
MFSD14A
TOR1AIP1
PIP5K1B
HCN3
SLC35F5
FH
EDC4
ZSCAN9
SLC25A53
SMAD5
AEBP2
NPM1
CCDC77
KDM5A
TCF19
CCHCR1
UCHL5
RO60
SCAND1
GRPEL2
GATB
OGDH
CWC25
HARS2
HARS1
RCOR3
C3orf33
MCCC1
TONSL
GARS1
CDC25B
ITGAV
TRIB3
PGPEP1
FAM169A
DNAH7
TOP3A
SMCR8
GOLGA7
DNAJC1
RAPGEF1
CASC3
TEFM
ZNF830
CCT6B
GET3
ACOX3
TRIM37
CLSPN
PHTF1
GTF2B
NADK2
STX11
DYRK4
TM7SF2
DPH1
TROAP
CCDC150
TEX15
EBAG9
FBXO48
APLF
MTLN
NQO2
GJA10
UTP15
ANKRA2
POLR3F
DZANK1
C12orf73
KLHL7
GCLM
POMZP3
CHCHD3
TRIM52
VPS37D
ZCCHC14
LHFPL5
TLR5
RFC3
GDAP1
CFAP69
SLC25A24
DUS1L
KIF11
SPC24
AP3S2
DNTTIP2
SCO1
ADPRM
MMAA
NLRC5
CRNKL1
CFAP61
DCAF4
ST6GAL1
TMCO1
KDM1A
ZNF518A
FUCA2
SERINC5
CSTF2
TFB2M
CNST
CMSS1
NBPF15
ELF2
CDIN1
TTC33
RHOBTB3
SPATA9
AGPAT1
RNF5
INSR
EIF1AD
BANF1
TBC1D23
CLDN1
GTF2H3
EIF2B1
PDZD11
KIF4A
ZNF107
KCTD5
LOC389831
OTULIN
TAF11
TMEM161B
CAV1
KIF15
KIAA1143
EFTUD2
CCDC103
RBM48
PEX1
NECAP2
PELP1
MRPL10
LRRC46
TPGS2
MDC1
MMP28
DOP1A
AHCY
RAD50
ACAD9
RECQL4
LRRC14
MTBP
MRPL13
YTHDF2
MYO1B
MLPH
MOK
POLR3B
SEC31A
GPAM
PIAS1
MAP2K1
IVNS1ABP
THAP9
NR3C1
ADPRHL1
SLC25A26
ECSIT
EIF2B5
KIAA1586
VPS33A
FDX2
CCDC146
IQCG
LMLN
TMEM129
TACC3
PWWP2A
ABHD16A
TRPC4AP
CYREN
FZD1
RABEP1
SEMA3A
WDR74
DYNC2I1
POC5
ZNF451
TMED7-TICAM2
TMED7
TRIM16
PFN2
SYP
PPT1
H4C3
ZNF547
TRAPPC2B
DNAJC13
PYROXD1
RAD54L
TBRG4
RNMT
FAM210A
ABCB10
RPS6KC1
TBPL1
GLI4
COASY
POLR1B
ZNF696
TUT4
TAF4B
SPC25
TACO1
ZBTB45
PHIP
NIPSNAP3A
EXD2
MRPL55
PHC3
TXNL1
FAM124A
PPIC
WDR62
THAP8
TTC30A
SLC30A5
OSBPL9
SLC35E2B
SREK1IP1
CWC27
ZFYVE16
OSBPL6
CDC6
PSMG4
RWDD1
RGL1
ARPC5
IARS2
RASA1
SCAF8
VPS36
ING5
ALMS1
SMIM12
MOSPD2
FANCB
TRIM23
TRAPPC13
SHLD3
N4BP3