ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089496 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◣ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

HEATR6
NPAS4
TUBD1
RPS6KB1
PSMD6
NCAPH
BCAS3
ARFGEF2
PFDN4
TRIM37
PARD6B
APPBP2
SCRT1
BRIP1
SMG8
CRBN
XRCC2
MTRNR2L8
USP32
NCOA3
RAD54B
SFSWAP
HSF1
BOP1
RTEL1
DYNLRB2
PPM1D
OAZ3
MRPL9
UBE3B
MOK
ZNF331
ATXN7
RRP15
TTF2
CLTC
HIPK1
ZNF217
BCAS4
TSR3
GNPTG
C3orf14
METTL1
EEF1AKMT3
CPLX2
TFRC
SUMF1
MTRNR2L2
SAP30BP
RECQL5
TTLL5
ERG28
CCNA2
ARMC2
ATG14
WDR4
IQGAP3
UNG
TRIP13
BRD9
SRPRB
HTR5A
RNFT1
SGO1
MCM7
AP4M1
NET1
XKR7
SIKE1
SEL1L
C8orf33
DCLRE1B
AP4B1
PRMT6
EIF3H
SKIV2L
NELFE
RMDN1
CPNE3
PSMB7
TBC1D23
RTF2
MOCS3
DPM1
NDUFAF6
RNF40
CCDC189
CCNE2
UBE2C
POLQ
KPNA2
TEX14
RAD51C
LTV1
IQSEC3
ZFYVE1
TCTN2
BICDL1
SKA3
MRPL57
PTPN1
BIRC5
BLM
TROAP
UTP20
RRM2
NOTCH2NLC
TRIM33
DCAF7
SPNS1
ATP1A1
CREBRF
PRELID3B
NAA25
NAGPA
NEURL2
CTSA
DHX40
AP4E1
GABARAPL2
SLC12A9
CSTF1
AURKA
BCAS1
TMEM186
PMM2
SGO2
COG7
USP14
USP54
SPTLC1
GLRX5
TACO1
PHTF1
MTPN
LUZP6
RUVBL1
EEFSEC
L1CAM
STX16
FBXO5
NME1-NME2
NME1
NTAQ1
VPS11
DUS4L-BCAP29
DUS4L
COG5
GHITM
EDC3
POLR2J3
NOL8
CENPP
RFC3
TELO2
DOP1A
PPP1R16A
RAE1
CIART
LARP4
DSCC1
SLC35B1
SPPL2A
PIP4P1
QSOX2
METTL2A
METTL17
SPG7
SRGAP2
FAM72A
TRMT61A
GFOD2
MYO5C
CKAP2L
MIS18A
MYL12B
CMTR2
TRPM7
TRIM25
WASHC5
NSMCE2
THAP5
DNAJB9
E2F4
FANCD2
RXYLT1
MBTD1
TOP1MT
UTP18
ARSG
SLC16A6
WDR3
GDAP2
ZFAND2A
NELFB
TSEN2
CDC14B
SURF2
SURF1
ZC3H14
ADPGK
FAM214A
EIF3E
SAXO2
EFL1
NAA35
FCF1
AREL1
MTFR2
FBXO32
PEPD
HSP90AA1
PRPF3
WDR20
CIBAR1
KLC1
COMMD4
HSDL1
DNAAF1
PPIL1
POLR3F
DZANK1
RECQL4
LRRC14
NUP214
PDXDC1
PDPK1
CHD1L
PRKAB2
BMP7
GOLGA5
PPM1E
ZDHHC24
ACTN3
THOC7
RABL2B
NUDT4B
MFSD1
NOTCH2
NUDCD1
C11orf49
SLC22A15
ATP6V1C1
TBX2
SPC25
CRNKL1
CFAP61
NUF2
QTRT1
CCNG2
TRMT1
UTP25
SMYD5
SCFD2
CCDC86
RRP12
FAM72C
CCNB1
RAD51
C16orf71
ANKS3
WASHC2C
EXO1
CCT2
C12orf66
AURKB
KIF18B
KIF20A
BRD8
URB1
SRGAP2B
FAM72D
RBM19
ZFPL1
CDCA5
SRGAP2C
FAM72B
CDC25A
DZIP3
CIP2A
GRWD1
IPO4
CCNB2
TTC27
NEIL3
KLHL18
KIF9
VPS33A
FBXW9
WASHC2A
SLX1B
SLX1A
BOLA2B
BOLA2
CDK7
FANCI
WDR74
PSME3
DHX37
ESCO2
NEK2
MAD2L1
NOL6
BOLA2-SMG1P6
SHCBP1
HEXA
TTK
RAD54L
CYB5R4
SKA1
C16orf46
GTF2H3
EIF2B1
ACOX3
TICRR
EBNA1BP2
CFAP57
CEP135
TRMT6
MCM8
DPH1
SHC1
CKS1B
RABL2A
NAT10
NLE1
EXOSC5
BCKDHA
PPAN-P2RY11
PPAN
NBPF1
GPATCH4
BUB1B
MRPL27
EME1
VARS1
KIF15
KIAA1143
TBRG4
ZMPSTE24
FAM161A
DYNC2I1
NUDT15
DCAF4
ACTR6
GTF3C4
DDX31
KIF2C
SMC2
ATP6V0D1
LZTFL1
TRUB2
COQ4
PIGU
KIAA0895
POLR1B
TRIP4
TMEM248
KNOP1
DLGAP5
SPCS1
GLT8D1
HMGB1
UFD1
CDC45
NOP16
HIGD2A
USP2
ANLN
NUDT2
KIF24
HAGH
FAHD1
UBFD1
EARS2
LYRM4
FARS2
PMS2
AIMP2
HCFC2
GLT8D2
RNF166
CTU2
MCM10
PRCP
KCTD9
CDCA2
DDIAS
VTA1
NMBR
NOL7
SUPV3L1
CENPW
HEATR1
UBXN11
RPP40
KIFC1
POLR3D
KIF23
CDK1
POU2F1
PLK4
DYRK1B
POC5
WDR46
PFDN6
PNO1
GBA
TMEM208
LRRC29
CDC20
DNAJC25-GNG10
DNAJC25
TAF13
PUM3
PBK
URB2
TAF5L
ATR
SNRPE
GCDH
CYB561D1
DUS2
DDX28
COMMD9
ULK4
GTSE1
GPATCH3
CDC6
TFB2M
CNST
ASPM
ZNF778
DDX11
SECISBP2
PCOTH
MIPEP
DDX49
COPE
MDN1
ZNF497
DDX21
TADA2B
CCDC96
RNASEH1
INTS7
DTL
EIF3C
ODF2
MRTO4
EMC1
DIMT1
UGGT1
MAK16
TTC26
SHQ1
PNPT1
SLC25A26
EIF3CL
EIF2D
UTP4
DERPC
CHTF8
WFDC3
DNTTIP1
FAM227B
DTWD1
SASS6
DDX19A
IPO11
WDR62
THAP8
TDRD7
IMP4
CCDC115
IREB2
SNX16
PPP2R3B
GATB
BLOC1S1
WIPI1
RRS1
GFM1
TRMT61B
PBRM1
GNL3
TRIAP1
PUS1
UTP15
ANKRA2
G6PC3
BUB1
HM13
LOC101928764
VAC14
LSM5
CENPS-CORT
CENPS
RTTN
TRIP12
FBXO36
FBXL13
ARMC10
MCOLN1
BLOC1S3
LAMP1
ZGRF1
LARP7
CEP55
RBM28
PWP1
MRM3
GLOD4
TRMO
TRAPPC6A
MND1
NOL10
THOC3
DIAPH3
KNL1
PPRC1
PGBD5
ZNF688
RNF187
NAGK
TSFM
C5orf51
CDC25C
BRCA1
HSPA9
TFIP11
TTLL11
RBKS
BABAM2
PRMT2
PINX1
THADA
MARCHF8
CEP43
PAXBP1
DYNLL1
SNRPD1
IARS1
ENDOV
OGDH
FARSB
ITGB3BP
EFCAB7
KLHDC4
ATAD2
BBS5
NPM1
DHODH
XRN2
TWNK
MRPL43
SYNJ1
CFAP298-TCP10L
CFAP298
FDX2
MRPS23
DDX42
CCDC47
MRPS35
TOMM40
OIP5
NUSAP1
NEMP1
MRPL3
ANAPC10
ABCE1
RAD18
STIL
QTRT2
CCDC191
ECSIT
HMGB2
YARS1
S100PBP
CASKIN2
CLSPN
WDR36
SSBP1
TSEN54
CFAP410
GSN
VRK1
E2F3
GTPBP4
AEN
RCL1
ZBTB9
CCDC146
RIOK1
CAGE1
DPH2
DUS3L
C1orf109
NCAPG
LRRC59
INO80
PCNA
ZAR1L
BRCA2
VPS50
PRMT1
HEPACAM2
BARHL1
PPIL2
MVK
AGFG2
MAPK8IP2
CENPN
NRL
PSMD9
HPD
CDCA8
TTLL4
MRM1
CASC3
STK11IP
IFT57
RAB14
MARS2
SUGP2
ARMC6
AP5Z1
FAM200B
NOC4L
DDX51
ADPRS
RAD51AP1
C12orf4
SLC25A51
NDUFS7
PISD
RPUSD4
FAM118B
MRPL4
ESPL1
CENPM
AXDND1
NRAS
SECISBP2L
CBWD5
RPIA
PPIH
GNL2
HSP90AB1
SETD4
UBA52
MMUT
CENPQ
MPHOSPH10
MCEE
NUP107
PARPBP
NUP37
MKI67
TAF4B
CKS2
TDG
GMNN
TOMM22
CDC37
PDE8A
RRP1
TMEM199
POLDIP2
TFPT
PRPF31
ASF1B
UTP23
RPSA
ABCF1
ZSWIM8
KAT2B
CCDC77
CPEB4
LTN1
RPS29
SLC39A6
EEF1E1
ZSWIM9
LIG1
TSN
C6orf89
ITFG2
RHNO1
FOXM1
GTPBP10
SKA2
PRR11
ZBTB17
UBN2
DNA2
HSPBP1
TIMELESS
KLHL32
PHB2
CAMTA1
ZNF593
C1orf232
VPS35
POMZP3
DHX33
CWC25
GAR1
RNMT
FAM210A
NUP35
TIPARP
FBXW8
MED20
BYSL
C12orf45
SOD2
ADAT1
XPO5
POLH
MTR
OXNAD1
DPH3
H4C15
H4C14
REXO4
STAM2
SAR1B
DNAH7
WDR43
SSNA1
ANAPC2
INKA2
DDX20
FAM174A
LAP3
SEC14L1
LARS2
IQCG
SRD5A1
PACRGL
SDAD1
STYXL1
IQCH
AAGAB
SLF2
USP30
CFAP299
ASNS
PPT1
DCAF11
ZBTB49
LYAR
WDR61
CBWD3
PTRHD1
CENPO
AP3D1
TMEM231
TOR1A
ADK
COPS7B
CELSR3
LSG1
EFTUD2
CCDC103
REXO5
ERI2
GDAP1
CFDP1
DHDDS
ZNF529
PC
ARHGAP11A-SCG5
ARHGAP11A
PRKAR1B
STX18
NGLY1
WDHD1
SOCS4
TMED5
CCDC18
ZNF202
SLC35C2
CNOT4
CNPY3
KIF14
ANKRD42
METTL3
POLR1F
TXLNA
DPP8
PALB2
DCTN5
RBM48
PEX1
DDX18
PARG
PLK1
SLC35A4
APBB3
COX14
TTC7A
ATP6V1H
HSPH1
MCFD2
NEU1
E2F8
RSPH1
STAT1
MEA1
KLHDC3
RAD9A
SF3A3
NOLC1
SUPT7L
SLC4A1AP
RPF2
TOM1L2
DRC3
EIF4H
HASPIN
EIF2S1
ATP6V1D
SPG21
CRCP
WDR81
SNAPC5
SLC25A32
DCAF13
MAP3K7
CARS1
YIPF3
POLR1C
LRP2BP
ANKRD37
FKBP1A
STAT3
LAMTOR5
CDK5RAP1
TMEM242
EIF2B3
KDM5A
NOB1
EBAG9
TRMT5
SLC38A6
SARS1
PABPC1
NCL
DBF4B
NDUFS3
KBTBD4
RPL6
CENPF
UBIAD1
KLHL12
FANCM
TMEM150A
SPATC1L
NUDCD3
ASH1L
NCLN
RIOK3
SPRYD4
TBL3
SLF1
KIAA0825
ERLIN2
BRIX1
RRP9
PARP3
ING5
NHP2
EIF1AD
BANF1
INTS12
GSTCD
WDR53
PHOSPHO2
FBXO45
CCDC173
RSL1D1
ANKMY2
BZW2
ZHX1-C8orf76
ZHX1
MRPL21
IGHMBP2
SMC4
AP3M1
CEP162
SAP30
KTI12
PIGW
MYO19
ZNF530
TRIT1
CMSS1
TIMM44
PES1
NUDT1
MRM2
PTPN11
ZSCAN22
UBE2Q1
DIABLO
SETD6
WDR27
MON1A
C6orf120
TTC4
MRPL1
IFT80
AATF
TTC23L
NDUFAF5
ESF1
POLR3B
CACTIN
PPIL4
MYBL2
TRMT44
FAF1
RECQL
GOLT1B
CSNK1G1
COG2
PARL
CLUAP1
SLC25A46
L3HYPDH
JKAMP
ATAD5
ATP5F1E
MTCH2
BAG6
B3GAT3
GOLGA3
ATG101
ANAPC1
HJURP
NDUFV1
RHEBL1
ARCN1
CBWD6
NCBP2AS2
NCBP2
SPATA33
PAK1IP1
LONP1
CATSPERD
C6orf52
CEP126
CZIB
NDUFAF4
IFT172
SF3A1
CCDC157
VPS37A
CNOT7
LOC112694756
CRKL
VPS53
TIMM23
PGK1
CCT5
ATPSCKMT
BNIP3L
BMS1
ZNF76
ZNF771
USP35
KCTD21
SRSF7
TBC1D30
CEP128
OSGEP
APEX1
LMLN
ZNF408
ARHGAP1
SLC35A5
ATG3
SYS1
STX6
TCF19
CCHCR1
ZNF26
FAAP24
CEP89
TXNL4A
COP1
SFXN2
ARL3
NOM1
NUFIP1
GPALPP1
RANGAP1
ATG16L1