ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089499 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◣ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
HEATR6
PSMD6
BCAS3
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
PFDN4
IQGAP3
HTR5A
TRIM37
SKA3
MRPL57
PARD6B
USP32
APPBP2
ATXN7
SLC12A9
SCRT1
PPM1D
DYNLRB2
UNG
ARFGEF2
IQSEC3
FANCI
KPNA2
NCOA3
ZNF217
DCLRE1B
AP4B1
BCAS4
CPLX2
BARHL1
SAP30BP
RECQL5
TRIP13
BRD9
C8orf33
METTL1
EEF1AKMT3
VRK1
RAD54B
HIPK1
HSDL1
DNAAF1
FAM72C
C12orf66
MCM10
TTLL11
MYBL2
C3orf14
TRIM33
XRCC2
SMG8
KIF14
POLQ
DHX40
TSR3
GNPTG
NEURL2
CTSA
BMP7
TRMT61A
AP3B2
NUDT1
MRM2
CSTF1
AURKA
HSF1
BOP1
XKR7
NOL8
CENPP
RNF166
CTU2
RFC3
FANCD2
SIKE1
BUB1
DUS2
DDX28
MTFR2
DZIP3
CIP2A
PGBD5
MOK
RRP15
SGO1
NAGPA
PHTF1
WDR4
SRGAP2B
FAM72D
TROAP
NCAPH
L1CAM
KLF10
RRM2
EIF3C
EIF3CL
KAT2B
TONSL
RNFT1
MOCS3
DPM1
FAM214A
LIX1L
SRGAP2C
FAM72B
CRBN
FANK1
EXO1
WASHC5
NSMCE2
MED20
BYSL
SARS1
KCNH6
CCNA2
GTF2H3
EIF2B1
CDIPT
EXOC6
TBX2
POLR2J3
LOC101928764
ZHX3
CCT2
TMED10
TRPM7
FBXO5
TSEN2
SKA2
PRR11
ATP6V1C1
PPP1R16A
METTL2A
ZFYVE1
THOC7
DSCC1
NOTCH2
VARS1
DNAJA3
TCTN1
INKA2
DDX20
AP4E1
RAB22A
BIRC5
TTK
EDC3
TBC1D30
GNS
TOP1MT
DYNC2I1
EIF2D
NEIL3
MRPS23
ADAT1
HSPA5
YPEL2
RTKN2
CCT5
ATPSCKMT
SLC52A2
FBXL6
NBPF11
TTF2
CHUK
LZTFL1
FBXO32
SGO2
ATG101
CEP128
RMDN1
CPNE3
ZNF517
SUMF1
UBE2C
SFSWAP
SQLE
AZIN1
EEF1E1
RABL2B
SRPRB
RCN2
IARS1
SPAG1
RRP12
ESPL1
NDUFS3
KBTBD4
ZSCAN2
GABPB1
U2SURP
ATAD2
GABARAPL2
WASHC2C
MCM7
AP4M1
CREBRF
PPT1
TCF19
CCHCR1
USP14
ERN1
ZNF696
COQ2
MYL12B
RAE1
TSFM
MTMR14
CKAP2L
ARMC2
DOP1A
OAZ3
MRPL9
POLR2J
CENPN
UTP23
APH1A
STK36
RNF25
CNTRL
C5
UTP20
NEK11
ASTE1
DYRK1B
CLTC
QSOX2
NUB1
CCNB1
CDC14B
DCAF4
CYB561D1
GTF3C5
SNAP25
VANGL1
TTC27
WASHC2A
MAPK8IP2
GPR89A
STOML1
PYCR3
TSEN15
WDR43
MRPL44
TICRR
RABL2A
NBPF1
NDUFAF6
CCNE2
VAC14
ZFPL1
CDCA5
PPM1E
NME1-NME2
NME1
IPO4
TRIP4
ZNF331
NET1
MED13
NUF2
GPR89B
IKBIP
APAF1
ZNF79
ROPN1L
ACOX3
REXO4
ASNS
STX16
TRMT44
RPS19
NAA25
UMPS
GET3
NAT10
NDUFB3
FAM126B
MYO5C
PPP1R12B
BICDL1
PRCP
DDIAS
PDXDC1
RXYLT1
WDR35
ATXN1L
RFX5
VPS33A
KLHL24
MSH3
DHFR
PRKAR1A
CENPBD1
PRELID3B
SLCO4A1
BCAS1
AGFG2
C16orf71
ANKS3
PUS1
NEMP1
NUP107
RSPH1
SPTLC1
DEPDC1B
TPTE
UGGT1
ATG14
ATP5F1E
TP53INP1
KIFC1
PLK4
YIPF4
STMN3
RAD51
PIGU
TACO1
FANCC
DHX37
AEN
RACGAP1
NOTCH2NLC
DECR1
GALK1
TRIAP1
DDX42
CCDC47
LTO1
CDK5RAP3
RECQL4
LRRC14
SLC25A24
DHODH
TOP1
INTS2
TFRC
RINT1
ZDHHC17
MDM1
CFDP1
INIP
ZEB1
TUFT1
CHRNA5
PREX1
ESCO2
CEP55
VPS50
HEPACAM2
CENPH
RNF115
POLR3C
BLM
LTV1
DLGAP5
RBM48
PEX1
PSMD12
SPATA2
ATP1A1
NHP2
MXD1
JMJD1C
PSMB7
RRP36
C12orf45
TMEM120B
NBPF12
BCAS2
MKI67
CNPY3
AOPEP
RRP1B
HSF2BP
TBK1
TMOD3
XPO4
CDC20
GLRX5
SLC35B1
PDPR
DPY30
EIF3E
PSMD4
NOL6
SUPV3L1
DDX11
DNAH7
C20orf27
PKMYT1
MED6
CPLX1
MND1
CCDC77
KDM5A
TMEM150A
LMAN2
TBC1D15
POLR2J2
STRADA
ARRDC4
SRGAP2
FAM72A
RNF114
E2F4
ARHGEF5
MARCHF10
GRWD1
NUP54
LRPPRC
ANKRD46
ZNF706
CCNE1
ABL2
KIF20A
BRD8
SMC2
ZNF367
POLL
DPCD
WDR74
ATR
KLHDC4
NPM1
CASKIN2
TSEN54
RNF40
CCDC189
DDX21
ZGRF1
LARP7
MFSD1
NDUFV1
SLC25A19
FRAT1
ZSCAN25
ZNHIT1
PLOD3
TCP11L1
WWP1
RMND5B
CCDC88A
VCPKMT
NAA35
FANCE
METTL6
EAF1
TRIM25
SF3B3
COG4
TRAPPC10
WDR46
PFDN6
TBC1D13
ZNF622
MDM4
LDLRAD3
RPL6
PTPN11
CMTR1
VPS13B
INCENP
CSRNP2
MMP24
MAP3K20
TMEM208
LRRC29
DIMT1
SLC35A5
ATG3
ATG7
TEX10
ECT2
TP53RK
MON2
URB1
POC5
PCOTH
MIPEP
TMEM199
POLDIP2
DDX46
NOTCH2NLA
GFPT1
PIP4P2
SHCBP1
RPP40
WFDC3
DNTTIP1
RSRC1
NDUFAB1
BIRC6
KIAA1586
RPL36AL
MGAT2
PRDX6
CLPTM1L
CCDC86
PPAN-P2RY11
PPAN
HMGB1
PMS2
AIMP2
PLK1
SEL1L
HEATR5A
HEATR5B
GPATCH11
PRPF18
ABCF2
GSTO2
GPR107
FAM171B
UTP4
DERPC
CHTF8
DUS4L-BCAP29
DUS4L
COG5
RBBP5
PRPF19
ASCC3
CEP135
MRPL3
FBXW8
PTRHD1
CENPO
NME2
ZFAND2A
AJUBA
TEDC2
MXD4
KAT8
CAV2
RBM19
ZNF688
RAD18
RPS29
C6orf89
NOB1
ZHX1-C8orf76
ZHX1
MTX1
THBS3
CENPA
SPPL2A
LRR1
NOMO2
ASL
GLE1
NOTCH2NLB
CPSF1
VAPB
PLCG1
GTSE1
ZNF778
BBS5
COMMD4
NOP9
DHRS1
UBE3B
PDCD6
MELK
IST1
SLC7A6OS
PRMT7
TADA3
ARPC4-TTLL3
ARPC4
WDR3
GDAP2
THAP5
DNAJB9
IFT88
NGDN
RNASEH2A
SPICE1
ANKRD40
AMMECR1L
SUSD6
TBL3
ZNF23
ANGEL1
FIGNL1
EEF2KMT
LSM8
FSD1L
SLC25A44
AUH
CCNG2
C16orf46
PPP2R3B
UBE2G2
MYG1
BCL7B
B4GALT7
CTNNAL1
PAM16
LRWD1
ALKBH4
MIGA2
PSMC6
COG7
NAGK
RUVBL1
TMEM67
GOLIM4
DSE
CLBA1
CD2BP2
TSPYL4
DDX19A
RRP1
EIF2S1
ATP6V1D
YIF1A
CCDC150
USP15
SENP5
SMIM5
PDE4DIP
NXF1
MRNIP
SAXO2
EFL1
PLEKHM3
ZNF3
STMN1
PCNX3
TATDN2
KIF21A
TOMM22
FAM174A
WDR53
FBXO45
FBXW2
GFOD2
SEC22B
ZC3HC1
TEFM
ZC3H3
DCAF7
H3-3B
RHEB
NDUFS6
BSN
DAP
FZD6
TADA2B
CCDC96
CCDC59
DPY19L4
PDCD11
ATP5MD
NOMO3
MESD
RPL14
FAHD2A
STRIP1
PRMT6
SLC27A2
NSG2
NTAQ1
ADPGK
SH3BGR
LCA5L
MAX
MYBL1
COPS3
COMMD2
PI4KB
CDK1
CKS2
EIF1AD
BANF1
NCBP2AS2
NCBP2
ZC3H18
TM2D3
PGS1
ALAD
PCMTD1
DENND2C
CENPW
PPRC1
RPSA
NOC3L
NIPSNAP3A
MRPL2
KLC4
TUT7
MLYCD
RASAL2
C7orf57
TAF4B
NOL11
XPC
LSM3
TCTEX1D2
OTULIN
PEBP1
CALU
CEP350
CDT1
NRAS
CPEB4
RHNO1
FOXM1
STYXL1
SPC25
TTLL5
ERG28
NDUFB2
TMEM167B
CDC25B
LMNA
DGKZ
SLC29A2
MEX3A
MIS18A
DNAJC25-GNG10
DNAJC25
RBM28
TTLL4
PGD
FAM117B
RIDA
POP1
CDK9
NUDT2
KIF24
FAM227B
DTWD1
FANCM
SPATA33
EEF1D
TIGD5
RRM2B
HSP90AA1
UQCRC2
WDR20
GBF1
VKORC1L1
STXBP3
CDC42BPG
KIF18B
UFD1
CDC45
E2F8
ELP1
ABITRAM
PTPN1
DERL1
TMEM258
FEN1
BZW1
SURF2
SURF1
CSDE1
BCKDHB
CDC42SE1
MLLT11
RNF31
PSME2
GDAP1
NOM1
ADCK1
ZNF473
VRK3
DHX16
LSS
TMEM183A
MFSD5
HGH1
ZNF680
SLC25A36
SLC39A9
ERH
THOC3
PCNA
RAD51AP1
C12orf4
HJURP
RHEBL1
LRRC47
ZNF148
CACYBP
USP10
ZNF641
PDPK1
CALB1
NTNG1
RNASEH1
POLR3F
DZANK1
DNA2
CIT
PIAS3
DNAJC21
DYNC1H1
SLX1B
SLX1A
BOLA2B
BOLA2
SPNS1
HCFC2
GLT8D2
SRD5A1
SYS1
GPN1
CCDC121
FAM161B
COQ6
PFDN2
NIT1
NUP160
KMT5A
ZBTB26
GKAP1
DYNLL2
ADAMTSL4
SNRPE
RHBDD2
SLC25A16
GPATCH1
CFAP54
BAZ1B
FANCG
TAF1C
ZFAND3
APRT
ZNF410
GLRX2
CHRNB2
STK3
PITPNC1
KLHL18
KIF9
SKIV2L
NELFE
PPIL1
MCCC1
ATP5MF-PTCD1
ATP5MF
UNKL
SPATA17
GPATCH2
PRTG
MRPL28
HSP90AB1
SSNA1
ANAPC2
EBAG9
TRMT5
SLC38A6
CENPE
WDR25
WARS1
NCKAP5L
ACBD3
UBQLN1
TECPR1
C14orf28
POLG2
UBR5
RNF19A
PDIA5
RELB
HAGH
FAHD1
PDSS1
SLC39A11
DARS2
CENPL
NGRN
CYB5B
RBM45
FBXO33
RCE1
HDAC2
CAMSAP2
USP45
ZNF492
CDC25A
BUB1B
POLR1B
NOL7
TRMT61B
ZBTB9
RAD9A
SMC4
IFT80
PDCD2L
POLN
HAUS3
PMPCB
IDH3A
USP8
STIP1
SWI5
GOLGA2
MTPN
LUZP6
RPN2
MROH8
CLCN7
ZNF726
IFT22
ERCC3
FAM122A
MROH1
EHBP1
HELZ
TENT2
PIEZO1
LACC1
CCDC122
TMEM231
TASP1
RWDD1
ZNF383
ETFDH
C4orf46
RTN4IP1
QRSL1
DDX23
DLD
SUCLG1
NDUFC2-KCTD14
NDUFC2
C2CD2L
IQSEC1
TRNT1
KANSL2
MCM3
PRPF3
ABCA5
DHX9
IFT74
SOAT1
PLAA
CUL7
FDX2
MVK
LARP4
METTL3
ALG8
LRFN4
YY1AP1
DAP3
EEF2K
EAPP
LEO1
ZNF142
BCS1L
C6orf136
YIPF2
TIMM29
FAM91A1
NUDT4B
NFATC2
USF2
HASPIN
SDE2
SGTB
NLN
ZNF682
PNO1
COMMD9
TCOF1
KIF11
NIP7
COG8
CHD1L
PRKAB2
ERCC4
RPP21
VAMP3
ANKS1A
CCNB1IP1
C8orf76
ANKRD13A
CYB561
PANK1
FARSB
SECISBP2L
WDR61
FIS1
RPLP1
METTL18
C1orf112
MPHOSPH6
NSUN5