ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11525509 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◣ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
MTRNR2L8
FRG2C
ADAMTSL1
CABCOCO1
SPATC1L
COL23A1
TNFRSF19
SP2
FRG2
H4C15
H4C14
DDX23
H4C11
CLPB
KATNB1
EVI5L
NAV3
BOD1
SLC8A1
VPS50
HEPACAM2
UNK
H3-3B
DNM2
TMEM115
CALCOCO1
DDX49
COPE
H4C3
H1-6
CHMP4B
SP1
POLR3F
DZANK1
TCEA2
FEM1A
IFRD2
TBL1X
RWDD1
EHF
PHF12
H2BC4
H2AC6
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FBXL19
AP2S1
TSN
ARID5B
H4C2
H3C2
IRF2BP2
RBBP5
MAPKAPK5
KHSRP
CIC
SCNM1
LYSMD1
GALM
PHB
FAP
THRAP3
TSNAXIP1
RANBP10
MRPL24
WDPCP
MDH1
FAM168A
BANP
PEX14
DFFA
RPS20
PRCC
MMACHC
CCDC163
PAFAH2
PPRC1
ARID2
RFX1
ID3
YJU2
TEPSIN
NDUFAF8
SUCLG1
NCLN
NUDCD1
CALR3
C19orf44
NEBL
ST3GAL2
HIKESHI
ZFYVE1
CCDC90B
PAK1IP1
C6orf52
TOM1L2
DRC3
OR4M1
TSC2
NTHL1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
SLC25A25
NAIF1
TMEM208
LRRC29
SPSB3
SNX16
RAB5B
OR4Q3
BMF
PANK4
HES5
INVS
ERP44
LRCH4
FBXO24
GSPT1
ZNF17
CCDC146
PPP1R12B
SMPD3
COX16
RAG2
IFTAP
WDR74
COMMD9
HNRNPC
VIPAS39
AHSA1
NDC80
METTL4
PEMT
RPS3
PES1
SPAAR
HRCT1
PIGL
NCOR1
ZNF417
ING4
ID1
CCDC200
UCKL1
SP5
PRR14
GBA
MTOR
PNKD
AAMP
BUB1B
STIP1
NUP107
C16orf91
GATB
INTS1
EMILIN1
GPR137
PIN4
ZNF268
ZNF608
NOP16
HIGD2A
SRSF11
LRRC40
KHDC4
SF3B6
FAM228B
SNX17
EIF2B4
CNIH4
ZFPL1
TMEM262
CDCA5
TACO1
ZNF140
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SYMPK
FOXA3
C19orf53
DDX41
H4C12
TMEM70
ELOC
CP
CEP295NL
LARS1
TMEM242
RPS7
OSBP
SF3A3
GSK3A
EXOC3L1
E2F4
TTI2
INTS9
HMBOX1
RPL32
MED27
CCNL1
ZNF211
TFPT
PRPF31
CYCS
DYNC1I2
SLC39A1
CRTC2
NEDD8-MDP1
NEDD8
GMPR2
NOC4L
DDX51
RCAN1
DMAC1
MTRF1
ZNF547
TRAPPC2B
TSSC4
TBL1XR1
ZCCHC4
SCAF1
RRAS
ZNF225
GTF2H4
SEC11C
TMTC3
CEP290
SSBP3
RANBP2
SPHK2
RPL18
FAM83E
ZSWIM3
ACOT8
COX7C
STK25
ZNF687
NDUFB5
MRPL47
ZC3H12A
TULP2
NUCB1
NUDT13
SMARCAL1
GUF1
UBQLN4
LAMTOR2
ZNF165
CAND1
STAM
NDUFAF5
ESF1
TBP
PSMB1
BUB3
H4C5
H2BC7
WDR46
PFDN6
PSMB6
TCERG1
ZCCHC8
MEIS1
RPS6KB2
PNPLA6
TRIP10
GPR108
SMG8
SHPK
CTNS
KMT2B
VARS1
VRK1
TMEM107
OAZ3
MRPL9
KBTBD6
METTL3
ZMAT2
USP17L22
USP17L20
FCF1
AREL1
NUP205
COMMD1
CCT4
TIMM21
FBXO15
EMC4
TOR1AIP2
TOR1AIP1
PLEKHM3
SLC35E2B
PSENEN
LIN37
GTF3C3
PPP1R12C
GSTO2
HDAC9
PHB2
TNFRSF12A
THOC6
HCFC1R1
TRDMT1
SIRT4
NPRL2
CYB561D2
ANAPC5
VWA5A
C12orf43
MRPL28
RHOT2
HEMK1
C3orf18
TBL3
ZFYVE19
DNAJC17
KRT15
ZSCAN22
NR6A1
ZNF605
ZNF628
NUF2
MICOS13
HSD11B1L
AK2
TM4SF18
MITD1
ABT1
NDUFS3
KBTBD4
UFD1
CDC45
MRPL53
NFIB
AHCYL2
SSBP2
RPL37
UBR2
CDK5RAP2
ZNF286A
POLDIP3
CTU1
ATP5F1B
ATP5MG
EIF4A3
PSMD11
NFKBIL1
ATP6V1G2
DDX39B
ZNF337
VPS25
ZNF383
GTPBP6
PSPN
ALKBH7
SEL1L
ZSCAN32
ZNF174
CCDC174
ATP6V1G1
UBAC1
HEXIM2
FARSB
PEX3
ADAT2
CA11
GOSR2
TATDN3
NSL1
TMEM94
UFSP2
C4orf47
ARHGEF1
RPL14
AURKAIP1
PTDSS2
LSG1
C1orf159
RARB
RAB5C
ZC3H10
RPL41
UTP11
CD2BP2
CRADD
RABL2B
BAHCC1
FAM187A
EFTUD2
CCDC103
NMT1
DCAKD
ZNF500
FASTKD1
G3BP1
SUFU
ACTR1A
ZNF776
SEC13
TIMMDC1
DCAF7
CLN3
APOBR
TLE3
NLK
SIRT2
NFKBIB
KCTD5
PRRG2
NOSIP
SSR3
STT3A
ZNF444
SART3
ISCU
VCPIP1
C8orf44-SGK3
DLGAP1
DSTYK
STX16
SELENOH
SLX4IP
MKKS
SMARCD2
HEXB
TRAPPC6B
PNN
PDE6D
COPS7B
TRMT10C
COX7A2L
TSNAX
TMEM60
PHTF2
NME1-NME2
NME1
USHBP1
BABAM1
EXD2
KRT23
SMAD3
TRAPPC3
TBC1D10B
MYLPF
MT2A
ZNF143
HEXA
FLAD1
LMAN2
C19orf67
RPL18A
FBXW11
POM121
CCAR2
C8orf58
SUPT7L
SLC4A1AP
TRAF7
API5
EXOC4
VEZT
FGD6
MTMR9
SUPV3L1
RPIA
H4C8
SUGP1
MAU2
CTDP1
COPS7A
SNX1
CIAO2A
SNX15
ZNF235
LTN1
EMCN
MRPL21
IGHMBP2
ZNF420
ZNF26
MRPL20
RBM42
ZNF384
THAP1
SSBP1
KRR1
PWWP2A
RNF121
LOC100133315
RBM25
TMX2
MED19
EIF3F
TAOK3
SUDS3
SCYL3
CDCA8
C1orf109
ZNF688
SLC35B1
SCRIB
SRD5A1
ZNF226
EIF2AK3
RPL27
TPRKB
ZBTB45
MARS1
ARHGAP9
DYNC2I2
PABPN1
TMEM63C
GET3
MPV17L2
TXNL4B
DHX38
CCDC59
DUS3L
ING3
RPL21
ZKSCAN8
RGPD2
RGPD1
TXNRD1
FRMPD4
CACTIN
ZBTB38
RNASEH2A
PRDX2
MTRNR2L9
VTI1B
RAB11B
ZNF335
SEC61B
ALG2
POLR2E
REXO1
ZNF576
IRGQ
ISY1-RAB43
ISY1
C19orf48
NDUFS7
NPAS4
UBE2I
HNRNPL
PRICKLE3
PCM1
CCP110
EMILIN2
MTRNR2L10
RPS27A
IPO13
CLHC1
SLC25A20
PCBP1
EXOSC5
BCKDHA
PHF19
MRPS7
GGA3
PPP5D1
CALM3
RPL35A
JOSD2
IQCG
HNRNPUL1
FNDC3A
ASPDH
CAPN15
ZNF691
RPL9
LIAS
STK36
RNF25
RBL1
PPP6R1
TRIP4
MRPS23
TRMO
TOP2A
DHX8
RPAIN
NUP88
PEAK1
HMG20A
LYRM4
FARS2
OPRL1
LKAAEAR1
AP2M1
MRPS18C
HELQ
TMEM160
USP48
IARS2
BPNT1
EPS15
STAM2
UBE2J1
INO80C
H3C15
H3C14
H2AC19
H2AC18
SYT7
SLC39A9
ERH
SLC25A19
OR6B2
NDUFA10
GLIPR1L1
CAPS2
USP30
PRORP
PPP2R3C
PTEN
KLLN
CCL3
TMEM109
H4C4
NDUFB3
INTS10
FAM126B
ARHGAP17
MYOM2
WDR97
MAF1
METTL26
CSDE1
TM9SF4
GABPB2
RABAC1
XAB2
PCP2
SESN1
CEP57L1
TOMM40L
APOA2
ARHGEF2
BRWD1
TRAPPC9
KLHL29
PSMC5
FTSJ3
DENND1B
GORAB
SF3B3
COG4
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
LTA4H
HSPA9
CWC27
NR1H3
ACP2
SYNGR4
ID2
ZSCAN5A
BMERB1
NFATC2IP
EIF4A1
TJP3
SF3B5
NVL
ZC3H6
SIX1
PROSER3
HSPB6
UTP3
RBM28
PNKP
CCL3L3
CCL3L1
RPGRIP1L
MAMDC2
FTO
MDM2
ENPP4
CLIC5
CGGBP1
ZMYND8
TRIM55
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
XPNPEP3
ST13
GCLC
ZNF548
LNPEP
ATP2C1
KLF6
TMEM256
NLGN2
IER3
FLOT1
ABCF2
CENPA
HBP1
MED24
TEKT2
ADPRS
FUT10
SCT
CDHR5
RAP2B
PRDM15
CCL5
ASXL1
ALG10B
SMCO1
CXCR5
MYEOV
HCAR3
MCAT
DPP9
CNOT1
CCDC39
ADO
UQCRC2
TPGS1
PEX26
ZNF56
RTRAF
RTF2
MDM4
ILF2
CCM2
UBE2H
NCOA7
KANSL3
FER1L5
TJP1
RUFY3
VPS52
RPS18
C1orf198
TTC33
TGIF1
KDM6B
ZPBP2
USP3
RGS8
IKZF3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
CSNK1G3
WHAMM
FSD2
CHST12
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
RIIAD1
NUP153
MED23
MAP2K3
IRF2BPL
CELF3
NGB
NAT16
SLC33A1
CMSS1
BIN2
PARP2
BTRC
SNRPD3
LAMP1
GUCD1
EML2
DOLPP1
LRRC14B
FMO4
DHX33
AQR
AP1G1
MNT
MACC1
FGG
POLG
MRM3
GLOD4
PHC2
MRPL1
DCP1B
C2orf42
HSD11B1
LIME1
INSR
NTMT1
C9orf50
ANP32C
SATB1
PXMP2
POLE
LEFTY2
FAAP24
CEP89
TPST1
RPS13
IFIT1
COPS8
TP63
LAS1L
CCDC77
WBP1L
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
ZNF451
WAPL
GALK2
COPS2
TYK2
TMEM79
STMN3
SMG5
RTEL1
PSMD4
KDSR
TLR5
TIMM22
STAP2
SMARCE1
RAD51AP1
PRPF19
NR1H2
MPND
EPYC
CWC25
C12orf4
UBB
PRPF18
WDR83OS
WDR83
TUT1
SPTLC3
MAN2B1
KIF16B
FDPS
ZNF749
ZNF609
EPRS1
ZNF565
ZNF146
MRPL44
ZNF552
RAP2A
GEMIN6
CRB1
C16orf72
KIF22
COPZ1
CCR2
ARNTL
SPC25
SCAMP4
RAD51AP2
FOS
ADAT3
SAP30BP
RECQL5
FAM156B
FAM156A
OCSTAMP
MYCBP2
NCDN
MFAP3L
KIAA0319L
CDK8
ATP5MC2
TSC1
TDRKH
RPL29
RAB40B
PHF23
GFI1B
DVL2
ZNF584
ZNF419
RANGAP1
RABL2A
MAMSTR
FOXP2
DHX16
WBP2
PTMA
NPIPB5
KLHL20
CLEC7A
SART1
PLCD3
DPEP3
ATG4C
ACBD4
UNC93B1
TBCK
STOML2
MED6
AIMP1
NWD1
HAX1
ERVMER34-1
C3orf38
ATXN2L
PEX2
P2RY10
OXCT2
CYP2R1
CRYAA2
CRYAA
SNAPC3
PSMD1
IFI44L
DDR2
TLDC2
CSTF1
AURKA
SH3GL1
GABARAP
CHAF1A
PSAP
NDUFAB1
NDUFA2
IK
EMX1
ECT2
TOMM40
TFB2M
RGS3
MTR
KCNN3
FBXW9
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
SLMAP
HIRIP3
CHD6
TAF6
PTGES2
PNISR
IDH3B
DESI2
CNPY4
CLPTM1L
ATG9B
ASB4
ASAP1
ABCB8
TCF3
STBD1
PPP1R37
GPR89A
GOLPH3L
FAM207A
ADRM1
PPIL3
NSMCE3
NIF3L1
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
RPS12
LCOR