ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11525512 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◣ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

DUX4
FRG2C
SPATC1L
MTRNR2L1
COL23A1
TNFRSF19
MTRNR2L2
MSH3
DHFR
FRG2
DNM2
PAFAH2
SP2
DDX49
COPE
UNK
H3-3B
FEM1A
H4C3
H1-6
RFX1
TCEA2
EVI5L
CLPB
RWDD1
MMACHC
CCDC163
UCKL1
PHF12
DDX23
GSPT1
PNPLA6
MTRNR2L8
BOD1
SLC25A25
NAIF1
ST3GAL2
ADAMTSL1
IFRD2
ANKHD1-EIF4EBP3
ANKHD1
H4C11
SCAF1
RRAS
RPS7
CALCOCO1
PHB
SLC8A1
MRPL24
WDR74
CHMP4B
TXNRD1
PSMD11
FBXL19
RAB5B
HIKESHI
HEXB
CCDC200
ZSCAN22
AP2S1
ZNF268
VPS50
HEPACAM2
CIC
POLR3F
DZANK1
H4C15
H4C14
C19orf53
ZNF225
CCAR2
C8orf58
OR6B2
NDUFA10
MAPKAPK5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
VIPAS39
AHSA1
SLC35E2B
PPP1R12B
PEX14
DFFA
C16orf91
DSTYK
FASTKD1
PNKD
AAMP
PAK1IP1
C6orf52
BANP
NFKBIL1
ATP6V1G2
TMEM94
KHSRP
RANBP2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
MRPL21
IGHMBP2
FAP
NCLN
PEMT
SUCLG1
UBQLN4
LAMTOR2
NUF2
RAG2
IFTAP
VTI1B
ZNF143
THRAP3
SCNM1
LYSMD1
YJU2
AURKAIP1
SEC61B
ALG2
NUP205
OSBP
C1orf159
PES1
CABCOCO1
SMPD3
TSNAX
NAV3
TMEM115
IRF2BP2
SYMPK
FOXA3
PRRG2
NOSIP
RPL9
LIAS
PDE6D
COPS7B
PRCC
RPS27A
CLHC1
UBAC1
NR1H3
ACP2
REXO1
WDPCP
MDH1
TBL1X
NLK
GATB
TAOK3
SUDS3
ING4
CCP110
ZNF570
ZNF569
MTOR
SUPT7L
SLC4A1AP
JOSD2
ASPDH
ZNF571
ZNF540
TATDN3
NSL1
ID3
TSNAXIP1
RANBP10
ZNF335
MRPS7
GGA3
GPAA1
EXOSC4
SP1
RBBP5
CCDC90B
FAM168A
SNX17
EIF2B4
INTS9
HMBOX1
C19orf48
AHCYL2
SCRIB
PCBP1
RNASEH2A
PRDX2
ING3
H4C2
H3C2
PPRC1
TBL3
STX16
WDR53
FBXO45
WDR97
MAF1
NEBL
AP2M1
TEPSIN
NDUFAF8
EXOC6B
TSC2
NTHL1
ZNF235
TNFRSF12A
THOC6
HCFC1R1
CACTIN
TSN
TOM1L2
DRC3
NOC4L
DDX51
FBH1
ANKRD16
SPAAR
LARS1
SIRT4
DYNC1I2
POLDIP3
H2BC4
H2AC6
POLR2E
HNRNPL
STK36
RNF25
GTF2H4
CAPN15
SLC35B4
SUPV3L1
RPS20
ZNF547
TRAPPC2B
COMMD1
CCT4
SOX6
C11orf58
INVS
ERP44
USP48
KDM6B
ZNF383
SUFU
ACTR1A
OPRL1
LKAAEAR1
ZFYVE19
DNAJC17
STAM2
NDC80
METTL4
UFD1
CDC45
TEKT2
ADPRS
FARSB
ZNF576
IRGQ
IPO13
ATP5MG
ASXL1
SLC39A1
CRTC2
ISY1-RAB43
ISY1
SF3A3
FAM149B1
ECD
ZFYVE1
NDUFS3
KBTBD4
OAZ3
MRPL9
LYRM4
FARS2
GOSR1
BUB1B
RAB11B
UQCRC2
KATNB1
PRICKLE3
RPS3
PSMB2
PEX26
IER3
FLOT1
ARID5B
HDAC9
CALR3
C19orf44
H4C12
EHF
GALM
TMEM208
LRRC29
OR4M1
TMEM70
ELOC
RPL32
ID1
SF3B6
FAM228B
HNRNPC
LRCH4
FBXO24
TSSC4
PRR14
ORMDL3
SLC35B1
ZNF687
LSG1
GSK3A
RGPD2
RGPD1
ZNF165
NUDCD1
ZNF17
CCDC146
GPR137
OR4Q3
TMEM107
TACO1
H4C5
H2BC7
TRIP10
GPR108
GBA
NPRL2
CYB561D2
SSR3
SPSB3
FRMPD4
G3BP1
BMF
STAM
TFPT
PRPF31
PIN4
STT3A
ARID2
SSBP1
SP5
UFSP2
SART3
ISCU
C4orf47
VCPIP1
C8orf44-SGK3
ZBTB38
SIRT2
NFKBIB
ZNF140
CYCS
SNX16
HRCT1
MICOS13
HSD11B1L
STIP1
HEXIM2
AK2
FLAD1
NUP107
CP
COMMD9
NR6A1
ZNF608
TIMM21
MTRNR2L9
FBXO15
TMEM60
PHTF2
COX16
DDX39B
CCDC174
PSPN
ALKBH7
KHDC4
LMAN2
WDR46
PFDN6
RPIA
ZNF417
SPHK2
RPL18
FAM83E
CNIH4
MEIS1
EXOC3L1
E2F4
PANK4
HES5
MRPL53
UBR2
ZC3H10
RPL41
ZNF444
TBL1XR1
TRDMT1
KRR1
BAHCC1
PIGL
NCOR1
ANAPC5
FAM187A
EFTUD2
CCDC103
SEC11C
RBM42
TRAF7
NFIB
DDX41
EMILIN1
KBTBD6
TRAPPC6B
PNN
TMTC3
CEP290
CAND1
GOSR2
NMT1
DCAKD
SMG8
METTL3
TULP2
PSENEN
NUCB1
LIN37
EIF3F
SRSF11
LRRC40
INTS1
NDUFS7
MED27
NME1-NME2
NME1
ZBTB45
SLX4IP
MKKS
TTI2
PWWP2A
TMEM242
ZSWIM3
ACOT8
RNF121
LOC100133315
NPAS4
DCAF7
UTP11
UBE2I
CDK5RAP2
TM4SF18
EIF2AK3
PCM1
ZFPL1
TMEM262
CDCA5
C19orf67
COX7C
NUDT13
TBC1D10B
RPL27
PSMB6
MYLPF
ATP6V1G1
EMILIN2
TCERG1
MTRNR2L10
GTPBP6
ATP5F1B
SSBP3
ZMAT2
H4C8
GTF3C3
VWA5A
PHB2
SLC25A20
BUB3
NEDD8-MDP1
NEDD8
GMPR2
GET3
KRT15
CLN3
APOBR
RPS6KB2
EXOSC5
BCKDHA
PHF19
ZNF337
SUGP1
MAU2
C12orf43
MRPL28
SEL1L
PPP5D1
CALM3
USP17L22
USP17L20
USHBP1
BABAM1
RPL35A
IQCG
HNRNPUL1
FNDC3A
ZNF384
SHPK
EMCN
CTNS
NDUFAF5
ESF1
NDUFB5
MRPL47
CDCA8
C1orf109
CTDP1
ZNF691
MITD1
RHOT2
KMT2B
ZNF500
RARB
CTU1
ZNF776
EXOC4
RBL1
ZNF605
EXD2
SMARCAL1
PPP1R12C
ARHGEF1
PPP6R1
SRD5A1
EMC4
TRIP4
RPL18A
KRT23
MRPS23
SEC13
COPS7A
TRMO
GSTO2
VPS25
TOP2A
SMARCD2
SELENOH
PABPN1
DLGAP1
DHX8
RPAIN
NUP88
CD2BP2
PEAK1
NOP16
HMG20A
HIGD2A
SSBP2
MRPS18C
HELQ
TMEM160
SNX1
CIAO2A
VEZT
IARS2
FGD6
BPNT1
SMAD3
RPL37
EPS15
CRADD
UBE2J1
FBXW11
INO80C
H3C15
H3C14
H2AC19
H2AC18
CCNL1
ZNF211
SYT7
SLC39A9
MTMR9
ERH
SLC25A19
TLE3
GLIPR1L1
CAPS2
USP30
PRORP
PPP2R3C
RCAN1
PTEN
KLLN
CCL3
MARS1
ARHGAP9
TMEM109
H4C4
DMAC1
NDUFB3
MTRF1
INTS10
FAM126B
ZCCHC4
ARHGAP17
MYOM2
MT2A
TPRKB
METTL26
LTN1
CSDE1
TM9SF4
STK25
GABPB2
DYNC2I2
RABAC1
ZNF688
ZC3H12A
XAB2
PCP2
SESN1
GUF1
CEP57L1
TOMM40L
APOA2
ARHGEF2
TBP
PSMB1
ZNF420
BRWD1
ZCCHC8
TRAPPC9
VARS1
VRK1
KLHL29
PSMC5
FTSJ3
FCF1
AREL1
DENND1B
TOR1AIP2
TOR1AIP1
GORAB
PLEKHM3
SF3B3
COG4
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
LTA4H
HSPA9
CWC27
HEMK1
C3orf18
ZNF628
SYNGR4
ID2
API5
ZSCAN5A
RPL21
BMERB1
NFATC2IP
EIF4A1
ABT1
TJP3
SF3B5
NVL
ZC3H6
SIX1
PROSER3
HSPB6
ZNF286A
UTP3
RBM28
PNKP
CCL3L3
CCL3L1
RPGRIP1L
MAMDC2
FTO
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
CGGBP1
ZMYND8
TRIM55
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
ZSCAN32
ZNF174
XPNPEP3
ST13
GCLC
ZNF548
LNPEP
ATP2C1
ZKSCAN8
PEX3
ADAT2
KLF6
CA11
TMEM256
NLGN2
ABCF2
CENPA
HBP1
RPL14
PTDSS2
MED24
FUT10
SCT
CDHR5
CCDC59
TMEM63C
RAB5C
RAP2B
PRDM15
CCL5
TXNL4B
TIMMDC1
DHX38
ALG10B
SMCO1
CXCR5
MYEOV
MPV17L2
HCAR3
MCAT
DPP9
CNOT1
CCDC39
ADO
TPGS1
ZNF56
RTRAF
RTF2
KCTD5
MDM4
ILF2
CCM2
UBE2H
NCOA7
KANSL3
FER1L5
TJP1
RUFY3
VPS52
RPS18
C1orf198
TTC33
TRMT10C
TGIF1
COX7A2L
TRAPPC3
ZPBP2
USP3
RGS8
IKZF3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
CSNK1G3
WHAMM
HEXA
FSD2
CHST12
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
RIIAD1
NUP153
MED23
MAP2K3
IRF2BPL
CELF3
NGB
NAT16
SLC33A1
CMSS1
BIN2
PARP2
BTRC
SNRPD3
LAMP1
GUCD1
EML2
DOLPP1
LRRC14B
FMO4
DHX33
AQR
AP1G1
MNT
MACC1
FGG
POLG
MRM3
GLOD4
SNX15
PHC2
MRPL1
DCP1B
C2orf42
HSD11B1
LIME1
INSR
NTMT1
C9orf50
ANP32C
SATB1
PXMP2
POLE
LEFTY2
FAAP24
CEP89
TPST1
RPS13
IFIT1
COPS8
TP63
LAS1L
CCDC77
ZNF26
WBP1L
MRPL20
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
CEP295NL
ZNF451
WAPL
GALK2
COPS2
TYK2
TMEM79
STMN3
SMG5
RTEL1
PSMD4
KDSR
TLR5
TIMM22
STAP2
SMARCE1
RAD51AP1
PRPF19
NR1H2
MPND
EPYC
CWC25
C12orf4
UBB
RBM25
PRPF18
WDR83OS
WDR83
TUT1
TMX2
SPTLC3
MED19
MAN2B1
KIF16B
FDPS
ZNF749
ZNF609
EPRS1
ZNF565
ZNF146
SCYL3
MRPL44
ZNF552
RAP2A
GEMIN6
CRB1
C16orf72
KIF22
COPZ1
CCR2
ARNTL
SPC25
SCAMP4
RAD51AP2
FOS
ADAT3
ZNF226
SAP30BP
RECQL5
FAM156B
FAM156A
OCSTAMP
MYCBP2
NCDN
MFAP3L
KIAA0319L
CDK8
ATP5MC2
TSC1
TDRKH
RPL29
RAB40B
PHF23
GFI1B
DVL2
ZNF584
ZNF419
RANGAP1
RABL2A
MAMSTR
FOXP2
DHX16
WBP2
PTMA
NPIPB5
KLHL20
CLEC7A
SART1
PLCD3
DPEP3
ATG4C
ACBD4
UNC93B1
TBCK
STOML2
MED6
AIMP1
NWD1
HAX1
ERVMER34-1
C3orf38
ATXN2L
PEX2
P2RY10
OXCT2
CYP2R1
CRYAA2
CRYAA
SNAPC3
PSMD1
IFI44L
DDR2
TLDC2
CSTF1
AURKA
SH3GL1
GABARAP
CHAF1A
PSAP
NDUFAB1
NDUFA2
IK
EMX1
ECT2
TOMM40
TFB2M
RGS3
MTR
KCNN3
FBXW9
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
SLMAP
HIRIP3
CHD6
TAF6
PTGES2
PNISR
IDH3B
DESI2
CNPY4
CLPTM1L
ATG9B
ASB4
ASAP1
ABCB8
TCF3
STBD1