ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466116 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◣ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
FRG2C
SP2
TNFRSF19
DUX4
FRG2
FEM1A
UCKL1
COL23A1
DNM2
IFRD2
PAFAH2
UNK
H3-3B
CLPB
RWDD1
H4C15
H4C14
H4C3
H1-6
BOD1
AP2S1
CHMP4B
SLC25A25
NAIF1
MMACHC
CCDC163
DDX49
COPE
PHB
EVI5L
CALCOCO1
FAP
TCEA2
RFX1
FBXL19
H4C11
RAB5B
PES1
PHF12
KHSRP
RBBP5
MTRNR2L1
ANKHD1-EIF4EBP3
ANKHD1
ADAMTSL1
CIC
SUCLG1
BANP
VTI1B
SLC8A1
PEX14
DFFA
PEMT
GTF2H4
CALR3
C19orf44
SP1
HIKESHI
MRPL24
YJU2
WDR74
RPS7
REXO1
RAG2
IFTAP
ZNF225
FASTKD1
SYMPK
FOXA3
SUPV3L1
TXNRD1
SLX1B
SLX1A
BOLA2B
BOLA2
C19orf48
WDPCP
MDH1
SCRIB
OSBP
POLR3F
DZANK1
C16orf91
PNKD
AAMP
CABCOCO1
NUP205
SMPD3
VPS50
HEPACAM2
ING4
TSNAXIP1
RANBP10
NLK
CACTIN
GSPT1
PRCC
ID3
SLC35B1
TMEM115
AURKAIP1
POLR2E
H2BC4
H2AC6
RNASEH2A
PRDX2
SCNM1
LYSMD1
INTS9
HMBOX1
CAPN15
TBL3
TOM1L2
DRC3
TNFRSF12A
THOC6
HCFC1R1
NEBL
POLDIP3
SLC35E2B
HEXB
PNPLA6
IPO13
PAK1IP1
C6orf52
RBL1
ZNF547
TRAPPC2B
ZNF165
VIPAS39
AHSA1
UBQLN4
LAMTOR2
MAPKAPK5
NCLN
UFSP2
C4orf47
ORMDL3
VCPIP1
C8orf44-SGK3
OAZ3
MRPL9
MRPL21
IGHMBP2
ZFYVE1
SSR3
GALM
BOLA2-SMG1P6
TSN
ZNF268
RANBP2
DSTYK
STT3A
SCAF1
RRAS
ZNF687
PSMD11
SART3
ISCU
RPIA
SEC61B
ALG2
HNRNPL
KAT6B
ZNF383
USP48
INVS
ERP44
LMAN2
ZNF444
BUB1B
NUP153
CCDC90B
TSC2
NTHL1
SUPT7L
SLC4A1AP
RPS20
PCBP1
ARID5B
CCAR2
C8orf58
TMEM94
THRAP3
TMEM208
LRRC29
NMT1
DCAKD
CCP110
H4C2
H3C2
RPL32
PPP1R12B
PRRG2
NOSIP
TFPT
PRPF31
DYNC1I2
LARS1
ZNF235
SIRT4
ZNF576
IRGQ
NAV3
DDX23
TBL1X
COMMD1
CCT4
ING3
ZNF691
ZNF143
TSNAX
MRPS7
GGA3
COPS8
TMEM70
ELOC
ZNF335
TMEM160
IER3
FLOT1
HNRNPC
STAM
PRR14
C1orf159
NDUFS7
IRF2BP2
SPAAR
MICOS13
HSD11B1L
VEZT
FGD6
NUF2
EXOSC5
BCKDHA
STMN3
RTEL1
UBAC1
RBM42
GET3
SESN1
CEP57L1
CWC25
FARSB
KRR1
TAOK3
SUDS3
MTOR
SF3A3
LYRM4
FARS2
ZNF749
PRICKLE3
RPS27A
CLHC1
NDUFS3
KBTBD4
RNF121
LOC100133315
STAM2
PEAK1
HMG20A
DYNC2I2
RAB11B
TACO1
STK36
RNF25
SIRT2
NFKBIB
PRORP
PPP2R3C
GSK3A
TRMO
OR6B2
NDUFA10
LRCH4
FBXO24
OPRL1
LKAAEAR1
PPRC1
PTMA
ID1
H4C8
TBCK
AIMP1
C19orf53
LSG1
TIMM21
FBXO15
TEPSIN
NDUFAF8
PSMD1
PABPN1
KATNB1
ISY1-RAB43
ISY1
ZBTB45
SLC25A19
ZSCAN22
G3BP1
MTR
GOSR2
SF3B3
COG4
TEKT2
ADPRS
TRAPPC6B
PNN
UQCRC2
PTGES2
FLAD1
CCDC174
RPL9
LIAS
TM9SF4
PSMC5
FTSJ3
TCF3
FAM187A
EFTUD2
CCDC103
TRAF7
UBE2I
ZNF605
RPGRIP1L
FTO
ASXL1
MTBP
MRPL13
SF3B5
NEDD8-MDP1
NEDD8
GMPR2
JOSD2
ASPDH
NFKBIL1
ATP6V1G2
NR6A1
DDX39B
H3C15
H3C14
H2AC19
H2AC18
NDUFB3
FAM126B
ZFYVE19
DNAJC17
AP2M1
RABAC1
ZNF140
SUFU
ACTR1A
H4C5
H2BC7
NPRL2
CYB561D2
UTP11
SLC39A9
ERH
ATG101
HDAC9
SREK1IP1
CWC27
BMERB1
KEAP1
TMEM107
TMEM60
PHTF2
WBP1
INO80B
PPP6R1
RPS3
USP17L22
USP17L20
ABCF2
CHPF2
XPNPEP3
ST13
SSU72
UFD1
CDC45
HSPA9
ADO
NDC80
METTL4
HEXIM2
TATDN3
NSL1
PER1
VPS52
RPS18
CP
HNRNPUL1
UBE2M
CHMP2A
U2SURP
TSSC4
OR4M1
KDM6B
CNPY2
NME6
HBP1
EIF4A1
ITGB3BP
EFCAB7
ZNF614
WDR46
PFDN6
SPSB3
CAND1
RPL35A
IQCG
SFR1
SUGP1
MAU2
CTDP1
MRPL53
MRPS23
ZSCAN5A
RPL37
SNRPB
PSMB5
EHF
NFX1
KMT5C
COMMD2
ID2
PARP2
MRPS11
MRPL46
TRIM55
SNX16
SNRPD3
GUCD1
PI4KB
MGRN1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H4C12
ST3GAL2
SF3B6
FAM228B
RGPD2
RGPD1
CCDC200
FAM168A
NUDCD1
ZNF17
CCDC146
GPR137
OR4Q3
TRIP10
GPR108
SNX17
EIF2B4
GBA
SLC39A1
CRTC2
FRMPD4
BMF
PIN4
ARID2
GATB
SSBP1
SP5
ZBTB38
CYCS
HRCT1
STIP1
AK2
NUP107
COMMD9
ZNF608
MTRNR2L9
COX16
PSPN
ALKBH7
KHDC4
ZNF417
SPHK2
RPL18
FAM83E
CNIH4
MEIS1
EXOC3L1
E2F4
PANK4
HES5
UBR2
ZC3H10
RPL41
TBL1XR1
TRDMT1
BAHCC1
PIGL
NCOR1
ANAPC5
SEC11C
NFIB
DDX41
EMILIN1
KBTBD6
TMTC3
CEP290
SMG8
METTL3
STX16
TULP2
PSENEN
NUCB1
LIN37
EIF3F
SRSF11
LRRC40
INTS1
MED27
AHCYL2
NME1-NME2
NME1
SLX4IP
MKKS
TTI2
PWWP2A
TMEM242
ZSWIM3
ACOT8
NPAS4
DCAF7
CDK5RAP2
TM4SF18
EIF2AK3
PCM1
ZFPL1
TMEM262
CDCA5
C19orf67
COX7C
NUDT13
TBC1D10B
RPL27
PSMB6
MYLPF
ATP6V1G1
EMILIN2
TCERG1
MTRNR2L10
GTPBP6
ATP5F1B
SSBP3
ZMAT2
GTF3C3
VWA5A
PHB2
SLC25A20
BUB3
KRT15
CLN3
APOBR
RPS6KB2
PHF19
ZNF337
C12orf43
MRPL28
SEL1L
PPP5D1
CALM3
USHBP1
BABAM1
FNDC3A
ZNF384
SHPK
EMCN
CTNS
NOC4L
NDUFAF5
ESF1
DDX51
NDUFB5
MRPL47
CDCA8
C1orf109
MITD1
RHOT2
KMT2B
ZNF500
RARB
CTU1
ZNF776
EXOC4
EXD2
SMARCAL1
PPP1R12C
ARHGEF1
SRD5A1
EMC4
TRIP4
RPL18A
KRT23
SEC13
COPS7A
GSTO2
VPS25
TOP2A
SMARCD2
SELENOH
DLGAP1
DHX8
RPAIN
NUP88
CD2BP2
NOP16
HIGD2A
SSBP2
MRPS18C
HELQ
SNX1
CIAO2A
IARS2
BPNT1
SMAD3
EPS15
CRADD
UBE2J1
FBXW11
PDE6D
INO80C
COPS7B
ATP5MG
CCNL1
ZNF211
SYT7
MTMR9
TLE3
GLIPR1L1
CAPS2
USP30
RCAN1
PTEN
KLLN
CCL3
MARS1
ARHGAP9
TMEM109
H4C4
DMAC1
MTRF1
INTS10
ZCCHC4
ARHGAP17
MYOM2
MT2A
WDR97
TPRKB
MAF1
METTL26
LTN1
CSDE1
STK25
GABPB2
ZNF688
ZC3H12A
XAB2
PCP2
GUF1
TOMM40L
APOA2
ARHGEF2
TBP
PSMB1
ZNF420
BRWD1
ZCCHC8
TRAPPC9
VARS1
VRK1
KLHL29
FCF1
AREL1
DENND1B
TOR1AIP2
TOR1AIP1
GORAB
PLEKHM3
CCDC124
RPS23
ATP6AP1L
LTA4H
HEMK1
C3orf18
ZNF628
NR1H3
ACP2
SYNGR4
API5
RPL21
NFATC2IP
ABT1
TJP3
NVL
ZC3H6
SIX1
PROSER3
HSPB6
ZNF286A
UTP3
RBM28
PNKP
CCL3L3
CCL3L1
MAMDC2
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
CGGBP1
ZMYND8
ACTL6A
NMNAT1
LZIC
KLF2
ALKBH3
ZSCAN32
ZNF174
GCLC
ZNF548
LNPEP
ATP2C1
ZKSCAN8
PEX3
ADAT2
KLF6
CA11
TMEM256
NLGN2
CENPA
RPL14
PTDSS2
MED24
FUT10
SCT
CDHR5
CCDC59
TMEM63C
RAB5C
RAP2B
PRDM15
CCL5
TXNL4B
TIMMDC1
DHX38
ALG10B
SMCO1
CXCR5
MYEOV
MPV17L2
HCAR3
MCAT
DPP9
CNOT1
CCDC39
TPGS1
PEX26
ZNF56
RTRAF
RTF2
KCTD5
MDM4
ILF2
CCM2
UBE2H
NCOA7
KANSL3
FER1L5
TJP1
RUFY3
C1orf198
TTC33
TRMT10C
TGIF1
COX7A2L
TRAPPC3
ZPBP2
USP3
RGS8
IKZF3
UBC
SKA2
PRR11
DRAP1
C11orf68
CSNK1G3
WHAMM
HEXA
FSD2
CHST12
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
RIIAD1
MED23
MAP2K3
IRF2BPL
CELF3
NGB
NAT16
SLC33A1
CMSS1
BIN2
BTRC
LAMP1
EML2
DOLPP1
LRRC14B
FMO4
DHX33
AQR
AP1G1
MNT
MACC1
FGG
POLG
MRM3
GLOD4
SNX15
PHC2
MRPL1
DCP1B
C2orf42
HSD11B1
LIME1
INSR
NTMT1
C9orf50
ANP32C
SATB1
PXMP2
POLE
LEFTY2
FAAP24
CEP89
TPST1
RPS13
IFIT1
TP63
LAS1L
CCDC77
ZNF26
WBP1L
MRPL20
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
CEP295NL
ZNF451
WAPL
GALK2
COPS2
TYK2
TMEM79
SMG5
PSMD4
KDSR
TLR5
TIMM22
STAP2
SMARCE1
RAD51AP1
PRPF19
NR1H2
MPND
EPYC
C12orf4
UBB
RBM25
PRPF18
WDR83OS
WDR83
TUT1
TMX2
SPTLC3
MED19
MAN2B1
KIF16B
FDPS
ZNF609
EPRS1
ZNF565
ZNF146
SCYL3
MRPL44
ZNF552
RAP2A
GEMIN6
CRB1
C16orf72
KIF22
COPZ1
CCR2
ARNTL
SPC25
SCAMP4
RAD51AP2
FOS
ADAT3
ZNF226
SAP30BP
RECQL5
FAM156B
FAM156A
OCSTAMP
MYCBP2
NCDN
MFAP3L
KIAA0319L
CDK8
ATP5MC2
TSC1
TDRKH
RPL29
RAB40B
PHF23
GFI1B
DVL2
ZNF584
ZNF419
RANGAP1
RABL2A
MAMSTR
FOXP2
DHX16
WBP2
NPIPB5
KLHL20
CLEC7A
SART1
PLCD3
DPEP3
ATG4C
ACBD4
UNC93B1
STOML2
MED6
NWD1
HAX1
ERVMER34-1
C3orf38
ATXN2L
PEX2
P2RY10
OXCT2
CYP2R1
CRYAA2
CRYAA
SNAPC3
IFI44L
DDR2
TLDC2
CSTF1
AURKA
SH3GL1
GABARAP
CHAF1A
PSAP
NDUFAB1
NDUFA2
IK
EMX1
ECT2
TOMM40
TFB2M
RGS3
KCNN3
FBXW9
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
SLMAP
HIRIP3
CHD6
TAF6
PNISR
IDH3B
DESI2