ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466113 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◣ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
ADAMTSL1
FRG2C
CABCOCO1
TNFRSF19
MTRNR2L1
SP2
EVI5L
UNK
H3-3B
UCKL1
DUX4
SLC8A1
DNM2
COL23A1
CLPB
FAP
H4C3
H1-6
VPS50
HEPACAM2
NAV3
ID3
H4C11
DDX49
COPE
IFRD2
FEM1A
FRG2
KATNB1
BOD1
RFX1
PHF12
NEBL
H4C15
H4C14
IRF2BP2
EHF
RBBP5
SUCLG1
CALCOCO1
FBXL19
ARID5B
OR4M1
THRAP3
TMEM115
ID1
RAB5B
AP2S1
ING4
SP1
H4C2
H3C2
TEPSIN
NDUFAF8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PPP1R12B
TCEA2
RWDD1
RAG2
IFTAP
HIKESHI
MAPKAPK5
GALM
CHMP4B
POLR3F
DZANK1
TBL1X
WDPCP
MDH1
YJU2
PES1
PEX14
DFFA
PAFAH2
WDR74
OR4Q3
KHSRP
SCNM1
LYSMD1
PRCC
CALR3
C19orf44
SLC39A1
CRTC2
SLX1B
SLX1A
BOLA2B
BOLA2
PAK1IP1
C6orf52
TSN
MMACHC
CCDC163
NUDCD1
CIC
TSC2
NTHL1
SF3B6
FAM228B
MTOR
TMEM70
ELOC
GSPT1
ZNF547
TRAPPC2B
CCAR2
C8orf58
PHB
SUPV3L1
H2BC4
H2AC6
SLC25A25
NAIF1
NUP205
NCLN
TSNAXIP1
RANBP10
POLDIP3
SMPD3
DDX23
C1orf159
ANKHD1-EIF4EBP3
ANKHD1
AURKAIP1
RPL32
SP5
RNASEH2A
PRDX2
TRIP10
GPR108
TXNRD1
ST3GAL2
MEIS1
ZFYVE1
C16orf91
BOLA2-SMG1P6
UBQLN4
LAMTOR2
SNX17
EIF2B4
TRDMT1
RPS20
NFIB
BMF
MRPL24
VIPAS39
AHSA1
SART3
ISCU
BANP
TSSC4
GSK3A
TOM1L2
DRC3
LRCH4
FBXO24
TMEM208
LRRC29
ORMDL3
ZNF17
SYMPK
FOXA3
VCPIP1
C8orf44-SGK3
ZNF608
SPAAR
BUB1B
HRCT1
GPR137
NUP107
CYCS
INVS
ERP44
KBTBD6
LSG1
SIRT4
GTF2H4
HNRNPC
G3BP1
TBL1XR1
EXOC3L1
E2F4
STAM
EMCN
UFSP2
C4orf47
METTL3
OSBP
H4C12
SEC11C
NPRL2
CYB561D2
ZNF225
NLK
CCDC146
NR6A1
KHDC4
SIRT2
NFKBIB
EIF2AK3
PNKD
AAMP
PPRC1
PRR14
ZNF548
ZNF691
RPS7
TMEM107
PEMT
LARS1
RPS3
NFKBIL1
ATP6V1G2
DDX39B
SRD5A1
ZNF383
CNIH4
TMTC3
CEP290
SUPT7L
SLC4A1AP
SUFU
ACTR1A
MICOS13
HSD11B1L
CDK5RAP2
CLN3
APOBR
TRMO
MED24
TRAF7
DSTYK
TULP2
NUCB1
MTRNR2L2
MSH3
DHFR
MRPL53
COMMD9
TM4SF18
RPIA
ISY1-RAB43
ISY1
EXOC4
ZNF268
CACTIN
UBR2
SPSB3
STT3A
LMAN2
C19orf67
MCAT
PIN4
ARID2
TIMM21
FBXO15
NUF2
ATP5F1B
ZNF56
RTRAF
RTF2
SCAF1
RRAS
ZC3H10
RPL41
NDUFS3
KBTBD4
OAZ3
MRPL9
WDR46
PFDN6
BAHCC1
UBE2I
TFPT
PRPF31
ZNF140
SLX4IP
MKKS
PEAK1
HMG20A
DDX41
MTRNR2L8
CCDC90B
COMMD1
CCT4
AK2
COX16
TTC33
TGIF1
EXD2
GATB
INTS9
HMBOX1
SSR3
UBC
ING3
TRAPPC6B
PNN
FLAD1
ZNF417
ZNF576
IRGQ
FAM187A
EFTUD2
CCDC103
H3C15
H3C14
H2AC19
H2AC18
ZSWIM3
ACOT8
NDUFC2-KCTD14
NDUFC2
VTI1B
NVL
RIIAD1
MAP2K3
IRF2BPL
CELF3
VWA5A
KRT23
ZNF143
FASTKD1
HNRNPL
UFD1
CDC45
CP
MED27
ZNF337
CCDC124
TMEM94
NME1-NME2
NME1
PHB2
BTRC
FAM168A
GTF3C3
SEL1L
ZNF500
ZNF776
LAMP1
SLC35B1
TMEM160
HEXIM2
DHX33
AP1G1
RPL27
ZNF384
RBL1
ID2
SNX16
PSMB6
ZMAT2
RARB
DCP1B
KRT15
NDUFB3
FAM126B
SLC25A19
TTI2
TCERG1
NUDT13
PXMP2
POLE
TMEM60
PHTF2
SPHK2
RPL18
FAM83E
CCP110
PSMD11
TSNAX
RPS13
SNX1
CIAO2A
FARSB
ANAPC5
COX7C
JOSD2
ASPDH
TRIP4
C19orf53
RANBP2
PSENEN
LIN37
RPS27A
CLHC1
RABAC1
ZSCAN5A
RNF121
LOC100133315
GBA
BUB3
MARS1
ARHGAP9
TMEM79
SMG5
ZNF444
EMILIN1
TBC1D10B
MYLPF
SEC13
DLGAP1
GABPB2
H4C5
H2BC7
TMEM242
USP17L22
USP17L20
RPS23
ATP6AP1L
TBL3
WDR83OS
WDR83
MAN2B1
FDPS
SLC35E2B
NDC80
METTL4
PRORP
PPP2R3C
TM9SF4
TRIM55
C12orf43
SYNGR4
ZNF565
ZNF146
MRPL44
ZNF687
SCRIB
ZNF335
EIF3F
SRSF11
LRRC40
RPS6KB2
EXOSC5
BCKDHA
MRPL28
METTL26
ZNF552
GEMIN6
DYNC1I2
NFATC2IP
SPC25
FOS
SAP30BP
RECQL5
FAM156B
FAM156A
HDAC9
GOSR2
SUGP1
MAU2
PNPLA6
REXO1
PIGL
NCOR1
SSBP3
EIF4A1
ZC3H6
NCDN
KIAA0319L
CDK8
RPL29
PHF23
DVL2
UBAC1
STIP1
IPO13
CTU1
TPRKB
ZNF584
ZNF419
RANGAP1
MAMSTR
FOXP2
WBP2
PRRG2
NOSIP
PANK4
HES5
MITD1
HSPA9
SART1
ATG4C
ZNF165
MED6
CCDC174
DCAF7
CGGBP1
NWD1
C3orf38
ATXN2L
PEX2
STK36
RNF25
TMEM109
SNAPC3
IFI44L
DDR2
ZNF235
CAND1
GET3
SHPK
CTNS
SMAD3
SREK1IP1
CWC27
MPV17L2
CSTF1
AURKA
ZBTB45
PEX26
GABARAP
ZSCAN22
RAB11B
AHCYL2
PCBP1
MRPS7
GGA3
CDCA8
C1orf109
CD2BP2
MTMR9
NDUFAB1
NDUFA2
IK
C19orf48
FBXW9
MRPS18C
HELQ
FBXW11
SLMAP
HIRIP3
SEC61B
ALG2
CTDP1
RPL18A
ZNF688
TAF6
PNISR
IDH3B
DESI2
CNPY4
ATG9B
ASB4
ABCB8
PSPN
ALKBH7
DHX8
NR1H3
ACP2
PPIL3
NIF3L1
RPL9
LIAS
USP30
RPS12
IER5L
SMG8
RPL21
BMERB1
NMNAT1
LZIC
HEXB
MYEOV
SH3RF2
AMOTL2
SF3B3
COG4
VPS4B
UBQLN1
CEP128
SSBP1
UTP11
CWC22
ZNRF3
SACS
NDUFAF5
ESF1
TMED10
NXNL2
NSA2
GFM2
PRICKLE3
SESN1
CEP57L1
GORAB
GCG
POLR2E
KMT2B
CENPA
RFC4
PTBP1
KRI1
DPH2
CDKN2D
ATP6V0B
KRR1
NMT1
DCAKD
VPS25
SLC39A9
ERH
ZNF112
ZBTB12
NGDN
EHMT2
DEXI
CLEC16A
C2
ZFPL1
TMEM262
CDCA5
SPNS1
HBP1
PTCD3
POLR1A
MVB12A
C10orf143
PPP1R12C
COPS7A
SF3B5
UTP3
NUP214
NOLC1
C12orf73
RBM42
LYRM4
FARS2
RPS26
GTF2IRD1
NDUFB5
MRPL47
XPNPEP3
ST13
TPGS1
PRKCI
HSPA13
HMGA2
BCAS2
USP17L21
USP17L18
USP17L12
USP17L11
RNF187
CRADD
PTPN6
C12orf57
BET1
ZNF420
SPAG7
RBM6
N4BP2L2
GTPBP3
B4GALT5
ANO8
NTMT1
C9orf50
TRMT2A
RANBP1
DARS2
CENPL
EMC4
LTA4H
TACO1
ZNF76
TIMM13
SLC4A2
RPA2
NOP53
CREM
CHD8
CDK5
PPP6R1
RPGRIP1L
FTO
VXN
UQCRH
LRRC41
CXXC1
MT2A
ZKSCAN8
CNOT1
SNRPB
WASF1
RNF5
HEXIM1
CDC40
AGPAT1
ALG10B
USHBP1
BABAM1
MRPS23
CSTF2T
GSTO2
ZRANB2
EIF2S3
SNRPD3
GUCD1
RHBDD3
MED11
GPATCH1
EWSR1
SMARCAL1
TLE3
NRL
DCAF11
PARP2
PPP1R9B
GPKOW
EIF1AD
BANF1
ZNF221
OXSR1
H2BC21
H2AC21
H2AC20
MRPL1
LENG1
ZNF2
SERP1
PPWD1
EIF2A
CENPK
RBM28
MRM3
GLOD4
SNRPE
NRDE2
GID4
ATPAF2
CAPN15
THYN1
GRWD1
ACAD8
CWF19L1
CCDC59
TTC31
CCDC33
CCDC142
ADO
ZMAT5
UQCR10
RACGAP1
PITX3
PHF5A
GBF1
CLTC
ACO2
BAG6
APOM
ZNF850
POLG2
ICE1
STAM2
RDH5
MED20
ITGA7
BYSL
BLOC1S1
PABPN1
WDR97
MAF1
SEC24C
ZMYND8
VPS52
RPS18
PAN2
IL23A
B3GALT4
TXNL4B
DHX38
DOLPP1
PPIG
CEP162
ZDHHC5
TMEM63C
PAF1
RPF1
SLC25A42
MOCS3
DPM1
RBM15
AP2B1
MPDU1
LOC100996842
CD68
SF3A3
RGPD2
RGPD1
CCDC200
FRMPD4
ZBTB38
MTRNR2L9
TNFRSF12A
THOC6
HCFC1R1
MRPL21
IGHMBP2
STX16
INTS1
NDUFS7
PWWP2A
ZFYVE19
NPAS4
DNAJC17
PCM1
TATDN3
NSL1
ATP6V1G1
EMILIN2
MTRNR2L10
GTPBP6
H4C8
SLC25A20
NEDD8-MDP1
NEDD8
GMPR2
TAOK3
SUDS3
PHF19
PPP5D1
CALM3
RPL35A
IQCG
HNRNPUL1
FNDC3A
NOC4L
DDX51
RHOT2
ZNF605
ARHGEF1
TOP2A
SMARCD2
SELENOH
RPAIN
NUP88
NOP16
HIGD2A
OPRL1
LKAAEAR1
AP2M1
SSBP2
USP48
VEZT
IARS2
FGD6
BPNT1
RPL37
EPS15
UBE2J1
PDE6D
INO80C
COPS7B
ATP5MG
CCNL1
ZNF211
SYT7
OR6B2
NDUFA10
GLIPR1L1
CAPS2
RCAN1
PTEN
KLLN
CCL3
H4C4
DMAC1
MTRF1
INTS10
ZCCHC4
ARHGAP17
MYOM2
LTN1
CSDE1
STK25
DYNC2I2
ZC3H12A
XAB2
PCP2
GUF1
TOMM40L
APOA2
ARHGEF2
TBP
PSMB1
BRWD1
ZCCHC8
TRAPPC9
VARS1
VRK1
KLHL29
PSMC5
FTSJ3
FCF1
AREL1
DENND1B
TOR1AIP2
TOR1AIP1
PLEKHM3
COMMD2
HEMK1
C3orf18
ZNF628
API5
ABT1
TJP3
SIX1
PROSER3
HSPB6
ZNF286A
PNKP
CCL3L3
CCL3L1
MAMDC2
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
ACTL6A
KLF2
ALKBH3
ZSCAN32
ZNF174
GCLC
LNPEP
ATP2C1
PEX3
ADAT2
KLF6
CA11
TMEM256
NLGN2
IER3
FLOT1
ABCF2
RPL14
PTDSS2
TEKT2
ADPRS
FUT10
SCT
CDHR5
RAB5C
RAP2B
PRDM15
CCL5
TIMMDC1
ASXL1
SMCO1
CXCR5
HCAR3
DPP9
CCDC39
UQCRC2
KCTD5
MDM4
ILF2
CCM2
UBE2H
NCOA7
KANSL3
FER1L5
TJP1
RUFY3
C1orf198
TRMT10C
COX7A2L
TRAPPC3
KDM6B
ZPBP2
USP3
RGS8
IKZF3
SKA2
PRR11
DRAP1
C11orf68
KAT6B
CSNK1G3
WHAMM
HEXA
FSD2
CHST12
BBX
KMT2C
HOOK1
NUP153
MED23
NGB