ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028798 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◣ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Rtn3
Gnai2
Inip
Flcn
Uqcrh
Lrrc41
Oga
Pip5k1c
Fam53c
Cln8
Gipc1
Aldh4a1
T2
Eed
Arntl
Cmc2
Cenpn
Phrf1
Cdk12
Nphp4
Kcnab2
Uchl3
Rita1
Ddx54
Ptcd3
Polr1a
Cenpe
Ptov1
Eif3b
Tcp11l2
Lrpprc
Nmral1
Med30
Rpl19
Ephb2
Calm3
Taf15
Septin11
Madd
Wdr77
Atp5pb
Get3
Denr
Cnot6
Srek1ip1
Cwc27
Mrps11
Mrpl46
Por
Arid4a
Samd4b
Gmfg
Cdiptos
Cdipt
Robo1
Cd3eap
Tbck
Aimp1
Rab28
Mlst8
Tst
Mpst
BC005537
Top2a
Bzw2
Ankmy2
Miga2
C1d
Nr6a1
Tada3
Arpc4
Lsg1
Prkdc
Mcm4
Rpl22
Hyal2
Myh14
Gnb2
Dgat2
Eif2ak3
Sash1
Pfdn4
Ift27
Arrdc4
Prkci
Ttll7
Slbp
Cdca7l
Galnt10
Mia2
Ott
Gm15107
Gm15085
Pkia
Tigd5
Eef1d
Dolpp1
Tbc1d17
Akt1s1
Asah1
Qrich1
Limch1
Fam227a
Cby1
Smc3
Zfp821
Tmem260
Uros
Bccip
Camta1
Utp18
Mbtd1
Zfp27
Ndufb1
Cpsf2
Psip1
Rnasek
Zfp687
Ankrd13a
Git2
Fus
Cnot11
Atg12
Ap3s1
Paxip1
Dpp9
Cdt1
Abhd2
Wasf1
Cdc40
Mblac1
Sharpin
Maf1
Rhbdd3
Ewsr1
Fsbp
Srpk2
Ankrd54
Ptcd2
Mrps27
Frat2
Tmem198b
Dnajc14
Nol6
Pabpc4
Uchl1
Cct5
Atpsckmt
Ppt2
Frat1
Hap1
Oxr1
Fgd4
Selenow
Zswim4
Psma8
Mat2a
Slc36a4
Dohh
Mbnl2
Rmnd5a
Atg101
Noct
Atrnl1
Pknox1
Gripap1
Iqch
Aagab
Atp8a1
Mgrn1
Pik3r3
Raly
Tspan4
Polr2l
Jun
Rlim
Pias2
Pafah1b3
Them6
Ces2a
Ilf2
Tcerg1
Uqcrq
Smg8
Tll1
Cnot1
Fanci
Hexim1
Tnrc6b
Dut
Dedd2
Oxgr1
Prdm10
Hdac2
Dnmt1
Lrch4
Uba1
Bzw1
Paip2b
Map3k7
Ptdss1
Mterf3
Rel
Atp5b
Map7d1
Cfap77
Mis12
Derl2
Inava
Spsb3
Nubp2
Gpr108
Nectin3
Siah3
Stip1
Ube2c
Ltbp4
Kctd2
Atp5h
Cd164
Mtch2
Hnrnpc
Cdca8
9930104L06Rik
Cdc25c
Polr2a
Sp2
Zfp94
Dnm2
Rbbp9
Traf2
Tepsin
Ndufaf8
Eif4a3
Ppm1l
Abhd16a
Rbm39
Papln
Brd2
Nol8
Cenpp
Wasl
Xrcc1
Pinlyp
Sspn
Myl12a
Smim4
Trp53
Wrap53
Nasp
Sdcbp
Actrt3
Fchsd2
Timeless
Ccp110
Tpbg
Sp1
Fos
Flad1
Rnf5
Col9a1
Rfx1
Fbln2
Mfsd13b
Cdr2
Mtmr14
Srxn1
Ttll10
Rhobtb3
Sgsm3
Zpbp
Krtap6-1
Cic
Akirin1
Katnb1
Cwc22
Paf1
Med29
Zfp869
Zfp580
Scamp5
Hcn1
Rab11b
Krcc1
Fxyd3
Fbxo33
Slc39a3
Prkaca
Rusc2
Ska2
Prr11
Ensa
Atp6v0c
Psmd5
Sel1l
Ccdc85c
Alox5ap
Sod2
Dbp
Dmxl1
Fbxl14
Nudt2
Kif24
Tacc1
Frem3
Rps19
Srgap2
Fam72a
Spdl1
H2-T9
H2-T22
Gm6034
Mvk
Mmab
Lsm6
Zfp219
Khsrp
Rps7
Nlk
Tmem94
Anp32e
Pramel51
Ugp2
Rnf26
Mtf2
Dot1l
Cspp1
Cops5
Nfatc2ip
Timm17b
Pqbp1
Atg16l2
Smarcal1
Kctd9
Cdca2
Nfe2
Plekhf2
Usp1
Fam76a
Rbm15
Prickle1
Ccnj
Ss18
Per2
Dgcr6
Golph3l
Relch
Pign
Slc25a20
Cul2
Rap2a
Rnpc3
Slit3
Pnpo
Abtb2
Plod2
Wbp1
Wdr62
Akt2
Kmt5c
Zfp608
Mtss2
Tom1
Hbp1
Wasf2
Slc25a25
Brat1
Ndrg2
Tmem218
Slc66a2
Dlst
Nudcd2
Hmmr
Tcf12
Dusp12
Mrps10
Krt19
Ift140
Cramp1l
Prdx2
Tctn2
Zfand3
Maco1
Fuz
A930018P22Rik
Hnrnpr
Kdm4a
Fzd2
Pip4k2b
Evi5l
Polg
Magel2
Rbm5
Ssrp1
Ezh2
Trim8
Ddx41
Nacc2
3110082I17Rik
Tcf19
Cchcr1
Immp1l
Elp4
Ivd
Arap1
Copz1
Rpn2
Mroh8
Bsdc1
Tle3
Cdc23
Ctps
Ap2m1
Psma2
Mrpl32
Dus1l
Ireb2
Stau2
Zfp607b
Znhit3
Snrpd3
Gucd1
Rspry1
Psme3ip1
Map3k3
Kmt2a
Hspa4
Ubald2
Zfp52
Mapk14
Dap3
Zbtb3
Nckap5
Pxmp4
Prickle2
Zfp599
Fam24b
G3bp1
Tmx2
Med19
Supt5
Dcc
Slc35e2
Hdac1
Sgms1
Elmo2
Tprn
Cep135
Nfatc2
Tedc1
Lars
Isoc2b
Ngdn
Akap11
Ankhd1
Zfp574
Hexim2
Zdhhc5
Hint2
Erg
Rbm25
Armc1
Ppp6r3
H2-DMb1
Wnt10b
Lyzl1
Folr2
Arf4
Rtkn
Sptlc2
Shisa5
Ube2b
Nvl
Sarnp
Ormdl2
C330007P06Rik
Lyrm7
Pmpcb
Rraga
Faap24
Lca5
Cemip
Kat6b
Tbcb
Polr2i
Ak1
Sorbs2
Phldb1
Arl2
Pan2
Poc5
Wdr27
1600012H06Rik
Yipf2
Timm29
Siah1b
Ankfy1
Diaph1
Rnf181
Osbp
Stat3
Ints4
Xab2
Pet100
Lratd1
Apc2
Cct8
Fdft1
Stt3a
Rcl1
Gpsm2
Cdc45
Heatr1
Gtpbp3
Trim45
Fdxr
Mxd4
Dcaf15
Dapk3
Trappc11
Rwdd4a
Mterf2
Psat1
Wwox
Rbbp6
Atf7
Msantd4
Cd1d1
Ctla4
Gtf2b
Got1
Rpl27
Tars
Ticrr
P4hb
Mon1b
Hip1
Tomm40
Timm10
Glrx5
Gcdh
Srp68
Ric8b
Mfsd8
Rpp38
Traf7
Psmb3
Nmt1
Mospd3
Chgb
Npm1
Arhgap11a
Arf2
Ppm1b
Zfp317
Islr
Pin1
Ap2a1
Sfpq
Chmp3
Acaa1a
Zfyve21
Xrcc3
Fam76b
Cep57
Abhd18
Rab40c
Mest
Alyref2
Zbtb40
Asmt
Jag2
Cenpu
Ndst2
Eapp
Bcl6
Oasl1
Rps29
Cltc
Fam20b
Rps27l
Sec14l1
Xpc
Lsm3
Pa2g4
Proser1
Nhlrc3
Srsf7
Hjurp
A730008H23Rik
Lrrc56
Hras
Rab5b
Crebzf
Tmem41b
Gm5165
Zfp143
Rab33b
Tjp2
Phlda3
H3c14
Susd6
Pole3
Gm3448
Gm3417
4933430I17Rik
Trappc9
Ctnnb1
Dnajc16
Nme1
H3c15
Ubr4
Get4
Slc35b1
Ccser2
Gtf2a1
Uvssa
Tcte3
Slc30a5
Chmp7
Zxdc
Cbr3
Ints10
Mrpl21
Ighmbp2
Frmd6
Htra2
Bbs2
Nt5c3
9030025P20Rik
Styxl1
Mdh2
Fkbp3
Ermard
Nuf2
Mapkapk5
Isy1
Taf9
Rad17
Ak6
Spty2d1
Chordc1
Tob1
Birc2
Magi1
Cfap20
Gatad2a
Tpt1
Mrpl30
Mitd1
Wdfy2
1700016H13Rik
Get1
Tecpr1
Gm3435
Zscan25
Plekha1
Tubb4b
Gramd1b
Fam149b
Ecd
Cnot3
Ttc14
Txnip
Faf1
Esyt2
Oprd1
Kpnb1
Med6
Zfp24
Snrpc
Palb2
Dctn5
Hmgcs1
Nabp1
Psmd3
Opa1
Rps12
H4c3
Tsga10
Actr3
Dffb
Cep104
Usp20
BC005624
Hes6
Calm1
Gtf2f1
Tcf3
H3f3b
Aard
Cactin
Ttc41
Hsp90b1
Sigmar1
Prpf40a
Dgat1
Arl6ip6
Rer1
Morn1
Tfg
Ccnt2
Itgb4
Kansl3
AW549877
Rps3a1
Nfat5
Zcchc14
Crtc1
Egr2
Eps15
Nup133
Srm
Aig1
Fitm2
Zfp654
Cggbp1
Lamp1
Vta1
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Wdr92
Pno1
Ist1
Evpl
Grb2
Inka1
Kpna3
Pop7
Utp3
Lig4
Sde2
Gale
Arhgef4
Stk32c
Rgl2
Ltbp1
Abcf2
Cipc
Supv3l1
Ube2d3
Rpl3
Gorasp2
Mef2a
Glce
Bod1l
Eif4e
Fam3c
Ttll5
Kifap3
Erg28
Zc3h18
Mob1a
Hnrnpa2b1
Cbx3
Ppp4r3b
Rnf7
Mettl25
Hr
Ccdc59
Colgalt1
Mmp15
Spc25
Sacm1l
Rbbp5
Mideas
Npc2
Isca2
Cep63
Anapc13
Slc33a1
Mdm2
Gpatch8
Adnp
Haspin
Tex14
Usp12
Abhd13
Fam227b
Dtwd1
Cfap298
Rab6a
Dcp1a
Zfpl1
Cdca5
Ep400
Yars
S100pbp
Pias4
Pex3
Adat2
Arl15
Med23
Fra10ac1
Banp
Rps6ka5
Man1b1
Rwdd1
Sfi1
Nup54
Birc5
Aph1b
Ap1g1
Timm13
Ube2j2
Cebpa
Kansl2
Med17
Cyth1
Mknk2
Txnl4b
Dhx38
2900026A02Rik
Atp5g1
Kdsr
Ss18l1
Psma7
Kifc5b
Cpsf1
Vps26c
Rab21
Hspa5
Nomo1
Cox18
Dhx33
Jpt2
Kbtbd3
Aasdhppt
Naa35
Spring1
Rnft2
Clptm1
Mafa
Srd5a1
Nsun2
Chchd2
Ssbp2
Snrnp200
1810024B03Rik
Ube2f
Sh3gl1
Rad23b
Gm51425
Ndufs7
Eif3f
Smim14
Tubg1
Retreg3
Saysd1
Vapa
Tut7
Lsr
Fam83b
Fam187b
Tex2
Pradc1
Myl12b
Cct7
Tmed2
Trib1
Calr
Commd1
Usp53
Smc6
Gen1
Bcl9l
Ubald1
Mindy2
Fem1b
Psmb2
Wdr36
Lancl2
Gm3739
Khdrbs1
Mrpl1
Cdk11b
Ddx20
Otud6b
Mtres1
Ppp2r5a
Mrpl44
Hnrnpl
Stag1
Setd3
Ccnk
Atf2
H2ac19
H2ac18
Cacybp
Supt4a
Ggct
Plag1
Fubp1
Dnajb4
Chmp5
Bag1
Mfsd4b4
Gas1
Ppwd1
Cenpk
Atg2a
Lsm14b
Eea1
Phf12
Tram1
Parp6
Nudt9
2310057M21Rik
Epg5
Ccdc126
Zfat
Ppp3cb
Herc2
Aff1
Polr3g
Mblac2
Arid1a
P4ha1
Rab5if
Clptm1l
Scamp1
Myh10
Poldip3
Krr1
Mtmr2
Ddost
Megf8
Brpf1
Meis1
Galk2
Cops2
Stx16
Pnn
Uspl1
Slc3a2
Cnnm3
Septin7
Xpnpep3
St13
Mrps31
Csnk1g2
Ahctf1
Sphk2
Rpl18
Dnajb1
Agpat5
Slc25a32
Dcaf13
Zbtb5
Tmem19
Spa17
Siae
Yif1b
Pxk
Ifnar1
Cyth2
Dab1
Slc39a13
Serpinb5
Pdik1l
Ampd3
Ss18l2
Dhx8
Btbd11
Thap12
Gmfb
Cops8
Dynll1
Srsf1
Wdr43
Prcc
Dnajb9
Zfp513
Fer
Eif1
Socs1
Oaz1
Nup50
Nufip1
Gpalpp1
Sun1
Nsfl1c
Taf4b
Ppp1cb
Mtmr6
Setx
Jund
Rad51ap1
D6Wsu163e
Pdap1
Bud31
Ctnna1
Exosc5
Bckdha
Stxbp4
Ddx18
Cox11