ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15441806 | Unclassified
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◣ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Eapp
Kmt2a
Hjurp
A730008H23Rik
Polr2a
Srsf7
Hes6
Pole3
4933430I17Rik
Lrpprc
Gm3448
Gm3417
9030025P20Rik
Ctnnb1
Gtf2f1
Cenpu
Ubr4
Chmp7
Tob1
H4c3
Ppm1l
Ccnt2
Gtf2a1
Slc35b1
Taf9
Rad17
Ak6
Oga
Spa17
Siae
Hexim2
Cdiptos
Cdipt
Tcte3
Gm3435
Tbck
Aimp1
Pop7
Mapkapk5
Polr3f
Dzank1
Nme1
Trappc9
Gorasp2
Tram1
Rps12
Cactin
Dnajc16
Arl15
Ttll5
Erg28
Crp
Ermard
Rpl22
Klf7
H3f3b
Eif4e
Cdkn2aip
Dgat1
Get1
Cltc
Nabp1
Xpnpep3
St13
Grb2
Olfr536
Lsm14b
Khdrbs1
Hadhb
Hadha
Timm13
Ctnna1
Rpl3
Tspan4
Polr2l
Nuf2
Ddx41
Get4
P4ha1
Proser1
Nhlrc3
Slc3a2
Snrpc
Pdap1
Bud31
Xpc
Lsm3
H3c14
H3c15
H2ac19
H2ac18
Tsga10
Ccdc126
Supv3l1
Otud6b
Gale
Magi1
Nudt9
Lpo
Clptm1l
Ppp4r3b
Atg2a
Thap12
Nfat5
Zc3h18
Steap4
Cfap20
Slc25a32
Dcaf13
Mfsd8
Rad51ap1
D6Wsu163e
Gtf2e2
Kpna3
Prdx1
Mrto4
Emc1
Uvssa
Sde2
Polr2e
Rab33b
Med17
Fdxacb1
1110032A03Rik
Vta1
Virma
Tnfaip3
Ptcd1
Cpsf4
Rps2
Arid5a
Med18
Actr3
Slc46a2
Dnajb9
B2m
Errfi1
Alpk1
Nat10
Mrpl10
Lrrc46
Wdr77
Atp5pb
Bbs2
Fam227b
Dtwd1
Ndufaf5
Esf1
Gar1
Gtf2b
Fus
Ccni
2010109A12Rik
Ptpn2
Bdp1
Gpn3
Fam216a
Ubxn1
Spg11
Coa8
Bag5
Bzw1
Srd5a1
Nsun2
Smc6
Gen1
Gss
Ifnar1
Rer1
Morn1
Srr
Smg6
Ilkap
Tmx3
Ubald1
Faf1
Kansl3
Gbp10
Atg101
Stk32c
Nomo1
Lrrc27
Gtf3c2
Calm1
Tmem250-ps
Htra2
Usp53
Gorab
Fitm2
Naa40
Med6
H4c18
Rnf7
Gmfb
Elf3
Arhgap11a
Wdfy2
Spdye4b
Rbak
Mat2a
Clptm1
2410002F23Rik
Zfp12
Tcf3
Map3k7
Oaz1
Uspl1
Vps26c
Tex2
Irf7
Usp1
Eif1
Sipa1l3
Rbbp5
Sec61b
Alg2
Uchl5
Ro60
Srrm2
Bcl9l
Atg16l1
Psmd3
Srsf9
Pxk
Exosc5
Bckdha
Taf4
Cirbp
Clu
Birc3
Sae1
Birc5
Map2k7
Tnc
Tigd5
Eef1d
Fam177a2
Fam177a
Tfrc
Eps15
Tcp1
Mrpl18
1810037I17Rik
Rbm8a
Rps3a1
Calr
Cherp
Vapa
Mtmr2
Wipi2
Tmem176b
Tmem176a
Cox7a2l
Fam53c
Mtf2
Mff
Pias4
Mef2a
Tmtc3
Cep290
Clpx
Spen
Ppp1r37
Vps29
Rad9b
Tsn
Gm4791
Cep63
Anapc13
Zfat
Eif2s3x
Ubb
Eif3d
Ccnt1
Atg5
Cct8
Ppp3cb
Rmnd5a
Mideas
Mmaa
Mrpl45
Zfp213
Jund
Mob4
Nup133
Zfp628
Gmcl1
Mbd1
Flcn
Tubb4b
Tspear
Cnot11
Rfxank
Gm45929
Borcs8
Vdac2
Eif2s1
Atp6v1d
G3bp1
Secisbp2
Cc2d1b
Birc2
Mycbp
Ikzf5
Acadsb
Cbr2
Herc4
Rsrc2
Kntc1
Eif4b
Phlda1
Casc3
Dclre1b
Ap4b1
Mrpl30
Mitd1
Csnk1g2
Mpp7
Fbxw7
Rad23b
Hsp90aa1
Tmsb10
Them4
Ints2
Jak3
Saysd1
Prdm15
Abhd18
Tut7
BC005537
Opa1
Usp12
Epg5
Rpl21
Ythdc1
Znfx1
Hint3
Cdk11b
Smg9
Ddx59
Stat3
Lsr
Fam187b
Atp5l
Cacybp
Cluh
Atr
1700065D16Rik
Gramd1b
Rab5if
Cdc42se2
Pip5k1c
Slbp
Mvk
Mmab
Wdr43
Rps15a
Dnaja1
Rhbdl2
Txnip
Mknk2
Mafb
Terf2
Glt28d2
Clp1
Wwox
Sugp2
Armc6
Cdc34
Nupl1
Psmd1
Mcl1
Sbk1
BC003965
Ier5
Rbm39
Parp6
Phf14
Ndufa4
Lig4
Abhd13
Eef1g
N4bp2l2
Upf1
9930021J03Rik
Sub1
Osbpl3
Ints10
Trappc8
Nfyc
Med11
Sepsecs
Cnot6
Pigm
Irf8
Harbi1
Atg13
Zfand3
Trmt2a
Ranbp1
Znhit6
Cwf19l1
Gtf2h3
Eif2b1
Rnf149
Abcf2
Tars
Npm1
Tstd2
Ncbp1
Zfp317
Zbtb37
Serpina3i
Zfp607b
Gpatch8
Tmem147
Ppp1cb
Capn10
Ap1s1
Zfpl1
Cdca5
Ftl1
Wdr92
Pno1
Rhob
Upf2
Wfikkn2
Snapc2
Rexo1
Rhbdf1
Tfg
Sec31a
Nsun6
Arl5b
Ints4
Csnk1a1
Chordc1
Poldip3
Wdr5
Ufm1
Trmt10a
Mttp
Itgb1bp1
Cpsf3
Usp48
Rps27l
Hspa5
Srrm1
Calcrl
Rnaseh2b
Slc9a1
Kdm4c
Hps5
Gtf2h1
Jmjd1c
Peli1
Rpl35a
Iqcg
Tmco3
Dcun1d2
Dhx16
Dohh
Mtmr14
2310057M21Rik
Nolc1
Cisd2
Gls
Ext1
Ppwd1
Cenpk
Hnrnpab
Msra
Rab6a
Rpl23
Erc1
Tex14
Sh3gl1
Nop58
H2-K1
Tchp
Mafa
Sf3b1
Notch2
Sirt6
Ankrd24
Fasn
Spink10
Fbxo38
Mageb3
Ctdspl2
Senp2
Ppp1ccb
Ppp1cc
Tti2
Trap1
Srfbp1
Cog7
Ehmt1
Mrpl17
Kat6a
Rpl32
Tmem260
Slc35e2
Tsc22d1
Usp8
Prkn
Pacrg
Klf4
Ccdc85c
Rps3
Cul2
Poc5
Mcoln1
Stam
Dhx8
Mcm7
Ap4m1
Rbm17
Sdad1
Sys1
Tab1
Kifap3
Cfap298
Rwdd1
Hsp90ab1
Paxip1
Atf2
Insig1
Gadd45b
Pan3
Zfp143
Ahcyl1
Phb2
Emg1
Hspa9
Etfdh
4930579G24Rik
Tbcd
Dnajc10
Ndufa9
Tada3
Arpc4
Bcl6
Setd3
Ccnk
Ccng2
Pold3
Serp1
Eif2a
Klf3
Cmtr1
Ash2l
Ssbp2
Zc3h6
Eftud2
Ccdc103
Golga7
Gbe1
Sugct
Mplkip
Btg1
Rsrp1
Chrac1
Chmp6
Kdsr
Klhl18
Kif9
Dbi
3110009E18Rik
Esyt2
Mrpl49
Fau
Kdm5c
Mon2
Mcfd2
Smc2
Mvd
Htt
Tmed2
Atad3a
AW549877
Cops8
Wdr41
Utp25
Kdm5a
Man1b1
Naa35
Pyroxd1
Rpl22l1
Mtrex
Dhx29
Gid8
Dido1
Eef2
Ankrd65
Cipc
Icmt
Psmd12
Naa25
Yeats4
Por
Robo1
Yars
S100pbp
Kbtbd3
Aasdhppt
Napg
Rpl9
Lias
Ss18l2
Picalm
Inpp5k
Med26
Irf9
Ep400
Xrcc1
Pinlyp
Lrig1
Rps9
Tmem41b
Phf7
Bap1
Pum1
Chchd2
Puf60
Pcmtd1
Neurl4
2810408A11Rik
Mss51
Smg7
Nras
Srsf2
Mfsd11
Nup107
Avl9
Rtf2
Ippk
Oxsm
Ngly1
Nol8
Cenpp
Gas1
Leng8
Golga5
Ranbp3
Cdk7
Taf6
Cnpy4
Ppp1r15b
Ltbp1
Setx
Ufl1
Cmc2
Cenpn
Cpped1
Pdk4
Supt4a
Mtmr6
Mis18bp1
Rplp0
Sap18b
Sap18
Snrpe
Ankrd22
Nudt5
Cdc123
Rgl1
Arpc5
Setdb1
Rnps1
Tmem39b
Txnl4b
Dhx38
Sh3glb1
Hmgxb3
Trp53inp1
Ddx18
Zfp623
Slc2a9
Ttc32
C87436
Sec61a1
Sptan1
Zcrb1
Pphln1
Hyal2
Marf1
B9d1
Cldn12
Anapc10
Abce1
Zfp119a
Ppp4r3a
Ssu72
Fra10ac1
Tmem104
Nat9
H4f16
Myl6b
Gadd45g
Srsf3
Rbm5
Taf4b
Susd6
Mrps11
Mrpl46
Sfswap
Dusp6
Usp32
Spg7
Mettl25
Ccdc59
Cebpa
Mylip
Tubg1
Retreg3
Fubp1
Dnajb4
Megf8
Rbx1
H2ax
Zbed4
Ccdc150
Dnaja4
Ifrd1
Tmem39a
Map3k14
Pkn2
Fxr1
Epc1
Ube4a
Fam168a
Mapk14
Odc1
Serac1
Gtf2h5
Srsf1
Zfp719
Tmem123
Rnf216
Utp15
Ankra2
Snx15
Psmd9
Sec24c
Setd1a
Ddx52
Nav3
Smc4
Ift80
Ube2d2a
Tfpt
Prpf31
Xpo5
Polh
Shprh
Zfp868
Pabpc1
Styxl1
Mdh2
Aebp2
Dad1
Abhd4
Abcf3
Psma2
Mrpl32
Rsbn1
Maml1
Gpr19
Mycbp2
Aasdh
Slc25a51
Slc33a1
Cox18
Ndel1
Eda2r
Alas1
Pik3r3
Golga1
Katna1
Ifitm3
Tmem219
Ptcd2
Mrps27
Rita1
Ddx54
Arl6ip1
Polr3a
Tbc1d2
Igsf9
Uros
Bccip
Ulk2
Hnrnph1
Actn4
Slc45a4
Blcap
Washc4
Mrpl9
Pex3
Adat2
Snrnp70
Tnpo2
Sft2d1
Rela
Ctnnbl1
Myl12a
Pabpc4
Sass6
Arf6
Macrod2
Nup85
H4c4
Stam2
Exosc6
Ttll12
Tcf4
Ice1
Lrr1
Rabif
Rptor
Mrpl12
Adpgk
Bag6
Rhot1
Cmss1
Rev1
Pum2
Ap1g1
Mfsd4b4
Fntb
Ssna1
Anapc2
Ddx20
Nup214
Runx1
Hmgxb4
Ppp1r8
Rtcb
Tecpr2
Cinp
Rheb
Tdp2
Acot13
Plpp3
Bud13
Tmem209
Ssmem1
Maz
Tyw1
Sbds
Actr10
Calm3
Surf6
Atf4
Mrps35
N6amt1
Rybp
Zcwpw2
Azi2
Zfyve16
Vps72
Pafah1b1
Mettl1
Eef1akmt3
Vcam1
Pde12
Arf4
Senp8
Myo9a
Cdca4
Upf3a
Dot1l
Copg1
Anks3
4930451G09Rik
Psmb6
Map4k1
Eif3k
Ppil4
Kctd3
Tpt1
Smim14
Cdkn2aipnl
Ythdf2
Eps15l1
Asxl2
Ergic2
Ppp2r2d
Mapk1ip1
Iqch
Aagab
Colgalt1
Cyrib
Emc7
Carmil3
Dync1i2
Mrpl15
Cpeb2
Ctsl
Prpf38a
Orc1
Trir
Csf1
Pmepa1
Polr3b
Ccdc62
Ube2i
Ankrd17
Agfg1
Polg
Fbxl14
Palb2
Dctn5
Psmb2
BC049762
Zfp473
Vrk3
Clk4
Borcs7
Rplp1
Rpl17
Mrpl54
Zfand5
Socs3
Ascc3
Cox6c
Elob
Flad1
Ift22
Atp6v0d1
Triap1
Gatc
Ndufb1
Cpsf2
Ifrd2
Tfb2m
Cnst
Gm5148
Snx12
Suco
Dnajc30
Bud23
Id4
Nfxl1
Armc8
Hspa12a
Eno4
E130309D02Rik
Ppat
Paics
Orc4
Mbd5
Rpl7a
Med22
Akap1
Ppia
Sik2
Cdc42bpb
Tomm7
Trim59
G6pc3
Pa2g4
Rpl26
Ppp6r1
Tspan14
Atrn
Depdc5
Slc30a5
Ttc14
Riok1
Cage1
Ints6
Pnrc1
Txnl1
Rbm47
Tmem161b
Wdr60
Lancl2
Etfrf1
Casc1
Jpt1
Lonp1
Catsperd
Nek11
Aste1
Sirt1
Aldh4a1
Timm22
Nfkbiz
Pdcd6ip
Clcn4
Tollip
Dctn4
Col16a1
Hmox1
Ubac1
Mybpc2
Fem1b
Xpot