ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15441805 | Unclassified
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◣ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Polr2a
Eapp
Srsf7
Cenpu
Cdiptos
Cdipt
Gtf2a1
Lrpprc
Pole3
4933430I17Rik
Gtf2f1
Slc35b1
Dnajc16
Ppm1l
Ctnnb1
H3f3b
Tob1
Kmt2a
Fus
Eif1
Arl15
Nme1
Hexim2
Trappc9
Gm3448
Gm3417
Tcte3
Gm3435
Vapa
Tram1
Asmt
Ermard
Tbck
Aimp1
Birc5
Ubr4
Rpl22
Htra2
H4c3
Cactin
Faf1
9030025P20Rik
Klf7
Chmp7
Hjurp
A730008H23Rik
Mapkapk5
Dgat1
Lsm14b
Rad51ap1
D6Wsu163e
Jund
Parp6
Sde2
Hsp90aa1
Nudt9
Get4
Mknk2
Magi1
Proser1
Nhlrc3
Cdk11b
Gpn3
Fam216a
Ubb
Rpl3
Taf4b
Spa17
Siae
Cfap20
Tsga10
Ccnt2
Smc6
Gen1
Cirbp
Hadhb
Hadha
P4ha1
Nabp1
Taf9
Rad17
Ak6
Cltc
Cdc34
Ddx41
Dnaja1
Uvssa
Tubg1
Retreg3
Irf8
Errfi1
Dnajb9
Cct8
Eif4e
Nup133
Tex14
Mtmr14
Hint3
Clptm1
Ier5
Klf4
Oga
Wdr77
Atp5pb
Gale
Usp12
Znfx1
Ptcd1
Cpsf4
Surf6
Nfat5
Pop7
Steap4
Xpnpep3
St13
Timm13
Runx1
Rps12
Eftud2
Ccdc103
Crp
Prdm15
Mtf2
Mpp7
Mat2a
Hes6
Carmil3
Tcf3
Khdrbs1
2410002F23Rik
Ptpn2
Ndufaf5
Esf1
Birc2
Get1
Med6
Vps26c
Hspa9
Abhd10
Robo1
Stk32c
Lrrc27
Mmaa
H4f16
Tigd5
Eef1d
Tspan4
Polr2l
Slc3a2
N4bp2l2
Irf7
Calm1
Tnpo2
Gtf3c2
Rer1
Morn1
Hnrnph1
Tmtc3
Cep290
Tmem147
Spen
Ints4
Psmd3
Arid5a
Rhob
Esyt2
Map3k7
Gmfb
Nomo1
Bzw1
H3c14
H3c15
H2ac19
H2ac18
Anapc10
Abce1
Tnfaip3
Spg11
Haus6
Picalm
Atp6v0d1
Ifnar1
Usp53
Rab33b
Kpna3
Pxk
Ahcyl1
Zfp868
H2-L
H2-D1
Ifrd1
Ppp1cb
Paxip1
Clptm1l
Ctnna1
Dnaja4
Hnrnpab
Slbp
Man1b1
Polr3f
Dzank1
Borcs7
Spdye4b
Rbak
Eef2
Bbs2
Otud6b
Rapgef6
Bdp1
Zc3h15
Trappc8
Casc3
Poc5
Megf8
Fbxw7
Mob4
Nav3
Zbtb37
Ythdc1
Taf6
Cnpy4
Ppp1r12a
Tmem41b
Mrpl10
Lrrc46
Srsf9
Ftl1
Ssbp2
Oaz1
Setx
Amd2
Amd1
Med17
Peli1
H2ax
Tut7
Ywhag
Gorasp2
Alpk1
Dnajb12
Plpp3
Srsf1
Gtf2h3
Eif2b1
1810037I17Rik
Emc7
Ppp1r8
Chordc1
Exosc5
Bckdha
Rab15
Txnl1
Prdx1
Cox7a2l
Gbp10
Wdfy2
Saysd1
Rnf216
Birc3
Snrpc
Cyrib
Pabpc4
Sec61b
Alg2
Taf4
Chrac1
Serpina3i
Atg5
Zfp143
Actr3
Ufl1
Septin7
Ndufa10
Nuf2
Ppp4r3b
Lig4
Abhd13
Fam241a
Ccni
2010109A12Rik
Virma
Mis18bp1
Eef1g
Wfikkn2
Akap10
Tpt1
Sf3b1
Grb2
Arf6
Btg1
Ddx5
Cep95
Colgalt1
Tcp1
Mrpl18
Riok1
Cage1
Rps2
Klhl18
Kif9
B2m
Bclaf1
Ric8b
Thap12
H2-K1
Med18
Stam
Elf3
Vta1
Wdr43
Trmt2a
Ranbp1
Matr3
Cebpa
Cdkn2aip
Ext1
Kansl3
Hspa4
Ttll5
Erg28
Rnf7
Slc46a2
Wipi2
Tfg
Naa40
Mafb
Smg9
Pdap1
Bud31
Cops8
H4c18
Ep400
Cherp
Gadd45b
Agfg1
Atg2a
Ccna2
Actn4
Tuba1c
Ankrd22
Yif1b
Atad3a
Ppp6r1
Uchl3
Map2k7
Rbm47
Ankrd65
Kbtbd3
Aasdhppt
Ikzf5
Acadsb
Fasn
Txnip
Nup107
Ifrd2
Ilkap
Zfp213
Rab6a
H3c7
H2bc9
Arl8b
Nsun6
Arl5b
Ppox
Rsrp1
Arih1
Dohh
Brpf1
Gtf2b
Sbk1
Rbpj
Rexo1
Tomt
Lamtor1
Fitm2
Mapk14
Cfap298
Mageb3
Ctdspl2
Pa2g4
Zxdc
Zfpl1
Cdca5
Phb2
Emg1
Nupl1
Rhbdd3
Ewsr1
Eps15
Gpatch8
Jmjd1c
Utp15
Ankra2
Tmem176b
Tmem176a
Cabyr
Tubb4b
Socs1
Prkn
Pacrg
Cluh
Cbr2
Eif2s1
Atp6v1d
Csnk1a1
Wdr41
Tmx3
Slc2a9
Slc35e2
Prcc
Sugp2
Armc6
Eif4b
Ndufv2
Mphosph9
2810006K23Rik
Atg14
Prr14l
Tnc
Srd5a1
Nsun2
Polr2e
Ubxn1
Rbm8a
Trip11
Ube2n
Serinc3
Ctsl
Arl6ip1
Kmt2d
Usp16
Zfp12
Upf2
Atxn2l
Pitpnb
Harbi1
Atg13
Atf4
9930021J03Rik
Gnb2
Rps27l
Kifap3
Vdac2
Rb1cc1
BC003965
Cdc42se2
Ptp4a1
Hnrnpa2b1
Cbx3
Zfyve16
Pura
Xpo5
Polh
Usp32
Mknk1
Nepro
Mtrex
Dhx29
Phf14
Ndufa4
Clpx
Zfp148
Tmem39a
Tmf1
Sptan1
Txnl4a
Gm16286
Rnf19b
Marf1
Id4
Itgb1bp1
Cpsf3
Fntb
Zfand5
Rps3
Hyal2
Fbxl14
Nectin3
Cox18
Uspl1
2300009A05Rik
Sqstm1
Rgl2
Poldip3
Atp5l
Polr3a
Smap1
Arhgap11a
Ccdc126
U2surp
Trrap
Rab35
Mrpl30
Mitd1
Psmb2
Notch2
Sap18b
Sap18
Cep120
Rfesd
Herpud2
Gtf2e2
Mideas
Dnajb1
Gatb
Zmiz1
Zfp628
Osbpl9
Yeats4
Ier3
Calm3
Epg5
Rsrc2
Kntc1
Pcmtd1
Ints10
Stat3
Rwdd1
Tmem104
Nat9
Dbi
3110009E18Rik
Btbd7
Tjap1
Tomm40
Galk2
Cops2
Thumpd3
Rad23b
Tsc22d1
Npm1
Fdxacb1
1110032A03Rik
Atxn7l2
Arf4
Rps28
Ndufa7
Ercc6l2
Phlda1
Sik2
Xpc
Lsm3
Utp3
Hspa5
Ttc32
Setd3
Ccnk
Prepl
Camkmt
Macrod2
Hif1a
Psmb6
Scrn3
Cir1
Srsf2
Mfsd11
Srr
Smg6
Gmcl1
Orc4
Mbd5
Atr
1700065D16Rik
H2ac21
H2ac20
H2bc21
Slc18a1
Atp6v1b2
Yars
S100pbp
Mylip
Kmt2e
Zc3h18
Ulk2
Nbeal1
Tcf4
Sipa1l3
Zfp963
Blnk
Ccdc85c
Bod1l
2310057M21Rik
Tmem19
Ift22
Napg
Slc9a1
Golga7
Cop1
Tex2
Ufm1
Otud1
Rps17
Tank
Fam53c
Naa35
Nup50
Tnrc18
Tdp2
Acot13
Tspan14
Atg10
Sspn
Slc20a1
Gls
Olfr536
Sub1
Ubald1
Mycbp
Psmd1
Cdk20
Herc4
Uchl5
Ro60
Nfkbiz
Coa8
Bag5
Kdelr2
Tmem53
Armh1
Ss18
Klf6
Ranbp2
Nop58
Odc1
Tmem250-ps
Rhot1
Ythdf2
Cmc2
Cenpn
Ptcd3
Polr1a
Tmed2
Mtmr6
Rps20
Sgo1
Srsf5
Rps15a
Pdk4
Hdlbp
Rps23
Mfsd8
Wwox
Myl6b
C87436
Palld
Rita1
Ddx54
Opa1
Aebp2
H4c14
Ppil4
Jak3
Abcf2
Ccnt1
Ascc3
Rbx1
Mrpl12
Psma2
Mrpl32
Eif2s3x
Ppp4r3a
Cfap97
Oxnad1
Dph3
Naca
BC005537
Glt28d2
Suclg1
Sh3gl1
Ppp1ccb
Ppp1cc
Ccnl1
Gbe1
Mccc1
Vps8
Rpl24
Rmnd5a
Srsf6
Btg2
Icam1
Wdr92
Pno1
Pias4
Pomt1
Fastk
Raly
Senp8
Myo9a
Tmem123
Hspa8
Eif5a
Gorab
Cited2
Tomm20
Gtf2f2
Nfkbia
Tor1aip2
Tor1aip1
Cd74
Cdkn2c
Tada3
Arpc4
Ice1
Rmnd1
Armt1
Tnrc6c
Erc1
Ehmt1
Clcn4
Mcoln1
Rpl21
Mrpl45
Nup153
Azin1
Casp4
Cog6
Gpr19
Mycbp2
Pnrc1
Dclre1b
Ap4b1
H4c4
Spg7
H4c9
Taf15
Ddx20
Rpl22l1
Ctbp1
Cpeb2
Tmsb10
Tmem186
Pmm2
Fam227b
Dtwd1
Slc25a32
Dcaf13
Tars
Atg16l1
Nfyc
Kdm4c
Kdm5a
Eif3a
Tapt1
Por
Rbbp6
Gcdh
Epc1
Zfp94
Efcab2
Gadd45g
Srsf3
Nup54
Rsbn1
Upf1
Etf1
Rpl35a
Iqcg
Gss
Abhd18
Calr
Commd1
Snrnp70
Fam168a
Mcl1
Krcc1
Slc30a5
Supv3l1
Bcl9l
Erlin2
Sec61a1
Snx15
Ralgapb
Flcn
Zfand3
Sepsecs
Rhbdf1
Rps27rt
Rab13
Kat6a
Atg101
Frat2
Adss
Cc2d1b
Hmgxb3
Hilpda
Suds3
Tpm1
Myl12a
Rps3a1
Ppp3cb
Usp8
Rabggta
Sirt1
Zfp438
Bcl6
Mrto4
Emc1
Hps5
Gtf2h1
Txndc11
Parp2
Tbc1d2
Tmx1
Man1a
Pip4p1
Fra10ac1
Usp1
Puf60
Serac1
Gtf2h5
Mbd1
Gins1
Rab7
Noct
Armc1
Crtc1
Dusp6
Arid3a
Baiap2
Slc25a51
Fam177a2
Fam177a
Ifi204
Tmem219
Rps7
Usp48
Actb
Rabl6
Igsf9
Uros
Bccip
Rfxank
Gm45929
Borcs8
Abcf3
Tbc1d14
Cdca4
Riok2
Eif3d
Smc4
Ift80
Tspear
Wbp4
Elf1
Prpf38a
Orc1
Clp1
Agps
Gm5148
Csnk1g2
Mrpl11
Ddi2
Pik3r3
Lamp1
Zfp719
Lsm4
Avl9
Wdr18
Tnfaip1
Ift20
Pyroxd1
Bag6
Wsb1
Etfrf1
Casc1
Atl2
Ppp1r10
Mrps18b
Ppp2r5a
Them4
Vps29
Rad9b
Homer1
Gm4925
Arl1
Aftph
Trib1
Mtmr2
Psmd12
Eda2r
Atg12
Ap3s1
Gramd1b
AW549877
Ppp1r37
Sfswap
Ddb1
Lrr1
Rpp14
Htd2
Sidt2
Spty2d1
Xrcc1
Pinlyp
Fubp1
Dnajb4
Zzz3
Asb7
Mff
Adam10
Serp1
Eif2a
Zfp511
Tubgcp2
Mthfsl
Ptges3
Isy1
Ccng2
Tti2
Capn10
Mtmr10
Oard1
Nfya
Gid8
Dido1
Pten
Eps15l1
Raf1
Trmt44
Tubd1
Rps6kb1
Akirin2
Bcas2
Tbc1d15
Tsc22d2
BC049762
Pold3
Clk4
D5Ertd579e
Aldh4a1
Glcci1
Resf1
Ap1s1
Hsp90ab1
Cipc
Timeless
Fnbp4
Nrbp2
Asxl2
Pdcd6ip
Tmem29
Slu7
Zfp119a
Sec24c
Ubxn4
Terf2
Sdc4
Styxl1
Mdh2
Kmt2b
Utp25
Myo9b
Haus8
Prmt7
Ndst2
Fchsd2
Chmp5
Bag1
Mfsd4b4
Pde12
Map3k14
Mrpl48
Mettl1
Eef1akmt3
Calcrl
H2-Q8
H2-Q6
Mafa
Smc2
Oser1
Heatr5a
Fzd5
Trim37
Echdc1
Jak1
Lamtor5
Tmem260
Zfat
Ints6
Dennd4b
Katna1
Cst3
Rab11b
Ube2d3
Zbtb22
Ipo9
Thg1l
Trir
Atrn
Rfx3
Lsg1
Hspa1b
Cct4
Socs3
Dnajc10
Trmt10a
Mttp
Mbtps1
Pgghg
Anapc1